Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_01s0011g04340.t01
CDS Infomation

cds chromosome:12X:1:3909169:3915670:-1 gene:VIT_01s0011g04340 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTCCGTGGATGCCTCTGTGGAGCGAAGAACAGAGCCTGAGAACCGCAACGGTGATGGA
AACGGGGTCGTTGCACCGAGCTCGACTCACAGGCTCCGGTTGAACCCGAACACCGATCAC
GAGCCGGACAACTACGAGGACCTTCAATTGGAGTTTAGTCCTTTGCTTTTCAGCTCTCTG
GAGCAGTACTTGCCTCCCTTCATGTTGAATGCGCGACGTGATGTTAAGGTTCAGTACATG
AGGGATATTCTGCTTCGGTACTCGAATGAGGCTGAACGGAATCGAGTTCAGAAGCAGAGA
GAATACCGGCAGAAGATTATGTCGAGATATCAGCCTCTTCATAGGGAGCTCTATGCCATG
AATGCTGAGAAGTTCTTTGTCCCCTCCTTTCTAGAAGCAATAAAAAATAATACAGAGGAG
GGTTTTAGGAGTATAATATCCGAAAGCTCTCCTGGAGTTTATACTTTTGAGATGCTTCAA
CCGTGTTTCTGTGAAATGTTGATGTCAGAGGTAGAAAATTTTGAGAAATGGGTCTATGAC
ACAAAATTCAGAATCATGCGACCAAATACAATGAATAAATATGGTGTTGTTCTTGATGAT
TTTGGCCTGGAAACCATGCTTGACAAGTTGATGGATAGCTTTATACGTCCTCTATCTAGA
GTTTTCTTTCCTGACTTTGGTGGATCCACTCTGGATTCTCATCATGGTTTTGTGGTTGAA
TATGGAATGGATAGGGATCTGGACCTGGGTTTTCATGTTGATGATTCAGAAGTCTCTTTA
AATGTTTGCTTGGGTCAGCAATTTTCTGGTGGAGAATTGTTCTTTCGAGGCATTCGATGT
GATAAACATGTAAATACAGAAGCACGAGCAGAGGAAATTTTAGATTATTACCATGTTCCA
GGACATGCAGTTCTTCATTGTGGTCGTCATCGTCATGGTGCTAGAGCCACAACATCTGGG
CATAGGATGAACTTACTATTGTGGTGCAGAAGTGCAGTCTTTAGGGAGCTGAAGAAATAT
CAGAAAGATTTCTCTAGTTGGTGTGCAGTGTGCCAACATGAGAAGAAAGAGAGGCAGCGT
GTAGCAGTTGCCACCACCAAACTGGAATTACTGAAGAGGGATGGAAATCCTGCTCCATGA

Peptide Sequence

PEP ID

VIT_01s0011g04340.t01
PEP Infomation

pep chromosome:12X:1:3909169:3915670:-1 gene:VIT_01s0011g04340 transcript:VIT_01s0011g04340.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MSVDASVERRTEPENRNGDGNGVVAPSSTHRLRLNPNTDHEPDNYEDLQLEFSPLLFSSL
EQYLPPFMLNARRDVKVQYMRDILLRYSNEAERNRVQKQREYRQKIMSRYQPLHRELYAM
NAEKFFVPSFLEAIKNNTEEGFRSIISESSPGVYTFEMLQPCFCEMLMSEVENFEKWVYD
TKFRIMRPNTMNKYGVVLDDFGLETMLDKLMDSFIRPLSRVFFPDFGGSTLDSHHGFVVE
YGMDRDLDLGFHVDDSEVSLNVCLGQQFSGGELFFRGIRCDKHVNTEARAEEILDYYHVP
GHAVLHCGRHRHGARATTSGHRMNLLLWCRSAVFRELKKYQKDFSSWCAVCQHEKKERQR
VAVATTKLELLKRDGNPAP

Transcript Sequence

Transcript ID

VIT_01s0011g04340.t01
Transcript Infomation

cdna chromosome:12X:1:3909169:3915670:-1 gene:VIT_01s0011g04340 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CTCTCGCTCTACTTTCTCTCTCCAAAACCATGTCCGTGGATGCCTCTGTGGAGCGAAGAA
CAGAGCCTGAGAACCGCAACGGTGATGGAAACGGGGTCGTTGCACCGAGCTCGACTCACA
GGCTCCGGTTGAACCCGAACACCGATCACGAGCCGGACAACTACGAGGACCTTCAATTGG
AGTTTAGTCCTTTGCTTTTCAGCTCTCTGGAGCAGTACTTGCCTCCCTTCATGTTGAATG
CGCGACGTGATGTTAAGGTTCAGTACATGAGGGATATTCTGCTTCGGTACTCGAATGAGG
CTGAACGGAATCGAGTTCAGAAGCAGAGAGAATACCGGCAGAAGATTATGTCGAGATATC
AGCCTCTTCATAGGGAGCTCTATGCCATGAATGCTGAGAAGTTCTTTGTCCCCTCCTTTC
TAGAAGCAATAAAAAATAATACAGAGGAGGGTTTTAGGAGTATAATATCCGAAAGCTCTC
CTGGAGTTTATACTTTTGAGATGCTTCAACCGTGTTTCTGTGAAATGTTGATGTCAGAGG
TAGAAAATTTTGAGAAATGGGTCTATGACACAAAATTCAGAATCATGCGACCAAATACAA
TGAATAAATATGGTGTTGTTCTTGATGATTTTGGCCTGGAAACCATGCTTGACAAGTTGA
TGGATAGCTTTATACGTCCTCTATCTAGAGTTTTCTTTCCTGACTTTGGTGGATCCACTC
TGGATTCTCATCATGGTTTTGTGGTTGAATATGGAATGGATAGGGATCTGGACCTGGGTT
TTCATGTTGATGATTCAGAAGTCTCTTTAAATGTTTGCTTGGGTCAGCAATTTTCTGGTG
GAGAATTGTTCTTTCGAGGCATTCGATGTGATAAACATGTAAATACAGAAGCACGAGCAG
AGGAAATTTTAGATTATTACCATGTTCCAGGACATGCAGTTCTTCATTGTGGTCGTCATC
GTCATGGTGCTAGAGCCACAACATCTGGGCATAGGATGAACTTACTATTGTGGTGCAGAA
GTGCAGTCTTTAGGGAGCTGAAGAAATATCAGAAAGATTTCTCTAGTTGGTGTGCAGTGT
GCCAACATGAGAAGAAAGAGAGGCAGCGTGTAGCAGTTGCCACCACCAAACTGGAATTAC
TGAAGAGGGATGGAAATCCTGCTCCATGAGCTGATGAATGTGCAATTTTTGCTTAGGAAA
TTGTAAAGTAGTGCAATTCTCGTCCCATCAACAGATTGAAACATTCTTTTTCAGTAATAT
ATCGAAAGGTTTGAAGGCTGTCCATTTGTAATGTGCTTCATTCCCTGTGCAAGATAGCTG
TACATTCAAATAGGTTGGCCAACTTAGCATCTGGCCT