Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_01s0011g04240.t01
CDS Infomation

cds chromosome:12X:1:3849170:3854088:1 gene:VIT_01s0011g04240 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAGAAAATTTGTGAATTTTGCACATCTTTGAGGCCAGTTGTTTACTGTAAGGCAGAT
GCAGCACTGCTTTGCCTTTCATGTGATGCAAAGGTTCACTCAGCAAATGCACTTTCCAAC
CGGCATCCTCGAACCCTACTATGTGAATCATGCAAATGCCGCCCAACTTCTCTTCGATGT
TTAGATCACCGGGTGTTTTTGTGTCGTAATTGTGACCGGAGCTTGCATGAAGTTTCTTCA
CAACATCATAGACGGGCGATTAGAAGTTATGTGGGATGCCCATCTGCTAAGGATTTTGTG
GCATTGTGGGGGTTTGAATTGAACGAAATGGAAACTGTTGCTCCTCGAGATCAGTTTGTT
TCTACTTCATGTGGTCCTCTGGAGCAAGGTGTGAGAAATTCAAGCTTTTCAAGACATTCT
TGCCAACAAGATGGAGTCTCTTCATTGGCTTTTGAACTAAACTCCTCAATTTCAATATTT
GGTGCAGAATCTGAGGTGGGATCGAGCACACAACAAAGTAAGGCATTTTACAATGGACAA
GGGCAGCAAAAAACATCTGTTATTTTGCAGCAAATTCTTGATTTGAAAAGGCTACAGCTC
ACTGACAGGAAAAACACATCATCTCTGATACGTGGCCAAGAACAAATTGATATATCTTCA
TCTAAGTTTAGCACTTCACAAAGGCTTGATGATGATCTTGATGAGCATTCACAAAATTCG
CTTGGTATCTGTTCTGATCTTCAGCAAATGGATAGTCCTAAGCAGGAACTGAAAGTGGAG
CCTTTTCCCTCACCATTTTCTCAACTGGAGCAGTTATCATCTTCTTCAACTGTTGGAATC
CCTTTGCATGGAGACCCCTTCTGGCAATGCAAAAGTCCAATTCAGAGTAGCCAGTTGTGG
TCTCAAAATATGCAAGATCTTGGAGTTTGTGAGGATGTTAACTGCTTCGATGATTTTAAC
ATTCCTGATGTTGATCTGACGTTTCAAAACTTTGAAGAGCTCTTTGGGGGTGATCAAGAT
CCAACCAGATTACCTGTTGACATTGAAGATGTGACGTATTCCTCCTTGGAGTAG

Peptide Sequence

PEP ID

VIT_01s0011g04240.t01
PEP Infomation

pep chromosome:12X:1:3849170:3854088:1 gene:VIT_01s0011g04240 transcript:VIT_01s0011g04240.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MEKICEFCTSLRPVVYCKADAALLCLSCDAKVHSANALSNRHPRTLLCESCKCRPTSLRC
LDHRVFLCRNCDRSLHEVSSQHHRRAIRSYVGCPSAKDFVALWGFELNEMETVAPRDQFV
STSCGPLEQGVRNSSFSRHSCQQDGVSSLAFELNSSISIFGAESEVGSSTQQSKAFYNGQ
GQQKTSVILQQILDLKRLQLTDRKNTSSLIRGQEQIDISSSKFSTSQRLDDDLDEHSQNS
LGICSDLQQMDSPKQELKVEPFPSPFSQLEQLSSSSTVGIPLHGDPFWQCKSPIQSSQLW
SQNMQDLGVCEDVNCFDDFNIPDVDLTFQNFEELFGGDQDPTRLPVDIEDVTYSSLE

Transcript Sequence

Transcript ID

VIT_01s0011g04240.t01
Transcript Infomation

cdna chromosome:12X:1:3849170:3854088:1 gene:VIT_01s0011g04240 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GATTCTCCAGAGGAAGGCTCTGCTCCAAGCCCTCTTCTCTATGGCCACGCCTCCATAACT
AGTGTTAGGGCTTTCCAAGTATACACAAACACTTAAACTACTTATATTTTCTTGGCAACC
AAACGCGGTTGACAGGTGTTTTTTGGGATTGGAGTAGAAACAAAGAAGAATCATGATTTC
TTAAGGAACTGAAACTTTAATGCTATGGAATCTGGGTTCAAGAAGTAATTGAAACTCAGT
ATTCAAATGCTATTGGAACCTTGGGGTTCTTTTATGGTTAGGAAATAAGGTAATGGAGAA
AATTTGTGAATTTTGCACATCTTTGAGGCCAGTTGTTTACTGTAAGGCAGATGCAGCACT
GCTTTGCCTTTCATGTGATGCAAAGGTTCACTCAGCAAATGCACTTTCCAACCGGCATCC
TCGAACCCTACTATGTGAATCATGCAAATGCCGCCCAACTTCTCTTCGATGTTTAGATCA
CCGGGTGTTTTTGTGTCGTAATTGTGACCGGAGCTTGCATGAAGTTTCTTCACAACATCA
TAGACGGGCGATTAGAAGTTATGTGGGATGCCCATCTGCTAAGGATTTTGTGGCATTGTG
GGGGTTTGAATTGAACGAAATGGAAACTGTTGCTCCTCGAGATCAGTTTGTTTCTACTTC
ATGTGGTCCTCTGGAGCAAGGTGTGAGAAATTCAAGCTTTTCAAGACATTCTTGCCAACA
AGATGGAGTCTCTTCATTGGCTTTTGAACTAAACTCCTCAATTTCAATATTTGGTGCAGA
ATCTGAGGTGGGATCGAGCACACAACAAAGTAAGGCATTTTACAATGGACAAGGGCAGCA
AAAAACATCTGTTATTTTGCAGCAAATTCTTGATTTGAAAAGGCTACAGCTCACTGACAG
GAAAAACACATCATCTCTGATACGTGGCCAAGAACAAATTGATATATCTTCATCTAAGTT
TAGCACTTCACAAAGGCTTGATGATGATCTTGATGAGCATTCACAAAATTCGCTTGGTAT
CTGTTCTGATCTTCAGCAAATGGATAGTCCTAAGCAGGAACTGAAAGTGGAGCCTTTTCC
CTCACCATTTTCTCAACTGGAGCAGTTATCATCTTCTTCAACTGTTGGAATCCCTTTGCA
TGGAGACCCCTTCTGGCAATGCAAAAGTCCAATTCAGAGTAGCCAGTTGTGGTCTCAAAA
TATGCAAGATCTTGGAGTTTGTGAGGATGTTAACTGCTTCGATGATTTTAACATTCCTGA
TGTTGATCTGACGTTTCAAAACTTTGAAGAGCTCTTTGGGGGTGATCAAGATCCAACCAG
ATTACCTGTTGACATTGAAGATGTGACGTATTCCTCCTTGGAGTAG