Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_01s0011g04130.t01
CDS Infomation

cds chromosome:12X:1:3742396:3754339:1 gene:VIT_01s0011g04130 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTCTGTTGATGGGATTGGAGTGGAGAGAGTGTTTATAGGAGCGGGATGCAACAGAATA
GTAAACAACGTCTCTTGGGGCGCTTGTGATTTAGTCGCTTTTGGTGCCGAAAACGGCGTC
GCTATATTCTGCCCTAAGGCAGCTCAGATTTTGACTACACTTCCAGGTCACAAGGCTTCT
GTCAACTGCACCCATTGGATTCCAAGTTCTAAATTTGCGTTCAAAGAAAAACAGCTAGAG
CGGCATTATCTGTTATCTGGTGATGCAGATGGTGTTATTCTGTTATGGGAATTATCTCTT
GCAGACAAAAAGTGGAGGCATGTGTTACAAGTACCACAACCACATAAGAAGGGTGTTACT
TGCATTACTGGAATTATGGTTTCTGAAACTGATGTGATATTTGCATCTACCTCTTCAGAT
GGAACAATAAATGTGTGGGAACTGATCCTTCCATCCACTATTGGAGGTGACTGCAAATTG
TCATTTCTGGAATCTATTTTTGTTGGTTCAAAATCCATGGTGGCACTTTCATTATCAGAA
TTACCTGGAAATACTGGGCATGTAGTCCTGGCAGCTGGGGGCTTAGATAATAAAGTTCAT
CTTTATTGCGGGGAGAGGACAGGAAAGTTTGTTCATGCTTGTGAGTTAAAAGGGCATACA
GATTGGATCCGGAGTTTGGACTTCTCCTTGCCTATATGCACCAATGATGGAACAAGCAGT
CTTTTACTTGTAAGTTCATCTCAGGACAGAGGCATACGCATATGGAAGATGGCTTCATGT
AGTTCTCAATCCAATTCTAAGGGTACATTTAGGGAGGAAAAGATAAGCTTGGCATCTTAT
ATTGAAGGTCCTGTACTTGTTGCTGGCTCATCCTCGTATCAGATATCTCTGGAATCTCTT
CTTATTGGACACGAGGATTGGGTTTATTCAGTGGAGTGGCAACCCCCTTCAGTCACATCT
GCAAATGGGTTTGCCTACTATCAACCACAAAGCATCTTATCTGCATCTATGGACAAGACA
ATGATGATCTGGCAACCTGAAAGGACTACTGGTATCTGGATGAATGTGGTCACTGTTGGG
GAATTAAGTCATTGTGCTTTAGGGTTCTATGGTGGCCATTGGAGCCCAAATGGAGATTCA
ATTTTGGCTCATGGTTACGGTGGATCTTTCCATCTCTGGAAAAATGTTGGTATCGAATAT
GACAATTGGCAACCACAAAAAGTTCCCTCTGGGCACTATGCAGCAGTGACTGATATTGCA
TGGGCCAGGTCTGGTGAATATTTGCTCTCAGTCAGTGCTGACCAGACAACTCGAATTTTT
GCATCTTGGCAAAATGAAGCTAGTTTTGGAGGTAGCGATTGTTGGCATGAAATTGCTCGC
CCTCAAGTTCATGGTCATGACATTAACTGTGTGACAATCATCCATGGAAAAGGGAACCAT
CGGTTTGTTAGTGGAGCTGATGAGAAGGTTGCCAGAGTGTTTGAGGCTCCTCTGTCTTTT
CTAAAGACATTAAATCATGCCATTTCACAAAAATCTAGTTTTCCTGAAGACTTTCAAGTC
GATGTTCAGATTTTGGGTGCAAATATGTCAGCTTTGGGACTATCACAGAAACCTATTTAT
GTTCATTCCACACATGAGAGTCCAGAAAGAAATGTCAATGATGGCCTTGACACACTTGAA
ACCATTCCAGATGCAGTACCAGTTGTGTTAACTGAACCCCCCATTGAAGAAAAATTGGCA
TGGCATACACTCTGGCCAGAGTCGCACAAACTCTATGGTCACGGGAATGAGCTGTTTTCT
TTGTGCTGTGACCAGGGAGGGAAGCTTGTTGCTTCATCATGTAAGGCTCAATCAGCGAAA
GTTGCAGAAATATGGCTATGGCAAGTGGGTTCATGGAAGGCAGTTGGTCGCTTGCAATCT
CACAGCTTAACAGTGACACAGATTGAATTTTCTCATGATGACAATCTGCTTTTGTCTGTC
TCCAGGGATCGCCAGTTTTCTGTTTTTGCAATAAAAAGAACAGGTGTGGACGAAGTCAGT
CACCAGCTTATAGCAAGGCAGGAGGCACACAAAAGAATAATATGGGCATGCTCTTGGAAC
CCATTTGGTCATGAATTTGCAACAGGTTCAAGGGACAAAACTGTGAAGATCTGGGCTGTA
GACAAGGGATCTTCAGTTAAGCAGCTCATGACTTTGCCACAGTTCACCAGTAGTGTCACC
GCCTTATCTTGGTTTGCTCTTGATCATCAGAGAAACGATGGGTTTCTTGCTGTTGGAATG
GAAAGTGGACTCGTTGAATTGTGGAGCCTTTCGGTGACCAGAACCGTAGATGGTAGCATG
ACAGTACCAGGTGTAACTGCTGCTCTTGTTAGACGGTTGGATCCATTTATGTGCCATGTT
TCCTCTGTGCAGCGTTTAGCATGGAGGAAGTCTGAGGCAAGTGGAGATTGCAAAAGCGTA
CTGCTTGCTTCTTGTGGAGCTGATCATTGTGTGAGAATTTTTGAGGTCAATGTTGCGTAA

Peptide Sequence

PEP ID

VIT_01s0011g04130.t01
PEP Infomation

pep chromosome:12X:1:3742396:3754339:1 gene:VIT_01s0011g04130 transcript:VIT_01s0011g04130.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MSVDGIGVERVFIGAGCNRIVNNVSWGACDLVAFGAENGVAIFCPKAAQILTTLPGHKAS
VNCTHWIPSSKFAFKEKQLERHYLLSGDADGVILLWELSLADKKWRHVLQVPQPHKKGVT
CITGIMVSETDVIFASTSSDGTINVWELILPSTIGGDCKLSFLESIFVGSKSMVALSLSE
LPGNTGHVVLAAGGLDNKVHLYCGERTGKFVHACELKGHTDWIRSLDFSLPICTNDGTSS
LLLVSSSQDRGIRIWKMASCSSQSNSKGTFREEKISLASYIEGPVLVAGSSSYQISLESL
LIGHEDWVYSVEWQPPSVTSANGFAYYQPQSILSASMDKTMMIWQPERTTGIWMNVVTVG
ELSHCALGFYGGHWSPNGDSILAHGYGGSFHLWKNVGIEYDNWQPQKVPSGHYAAVTDIA
WARSGEYLLSVSADQTTRIFASWQNEASFGGSDCWHEIARPQVHGHDINCVTIIHGKGNH
RFVSGADEKVARVFEAPLSFLKTLNHAISQKSSFPEDFQVDVQILGANMSALGLSQKPIY
VHSTHESPERNVNDGLDTLETIPDAVPVVLTEPPIEEKLAWHTLWPESHKLYGHGNELFS
LCCDQGGKLVASSCKAQSAKVAEIWLWQVGSWKAVGRLQSHSLTVTQIEFSHDDNLLLSV
SRDRQFSVFAIKRTGVDEVSHQLIARQEAHKRIIWACSWNPFGHEFATGSRDKTVKIWAV
DKGSSVKQLMTLPQFTSSVTALSWFALDHQRNDGFLAVGMESGLVELWSLSVTRTVDGSM
TVPGVTAALVRRLDPFMCHVSSVQRLAWRKSEASGDCKSVLLASCGADHCVRIFEVNVA

Transcript Sequence

Transcript ID

VIT_01s0011g04130.t01
Transcript Infomation

cdna chromosome:12X:1:3742396:3754339:1 gene:VIT_01s0011g04130 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AGAGTATAGCAAGCCATGTCTGTTGATGGGATTGGAGTGGAGAGAGTGTTTATAGGAGCG
GGATGCAACAGAATAGTAAACAACGTCTCTTGGGGCGCTTGTGATTTAGTCGCTTTTGGT
GCCGAAAACGGCGTCGCTATATTCTGCCCTAAGGCAGCTCAGATTTTGACTACACTTCCA
GGTCACAAGGCTTCTGTCAACTGCACCCATTGGATTCCAAGTTCTAAATTTGCGTTCAAA
GAAAAACAGCTAGAGCGGCATTATCTGTTATCTGGTGATGCAGATGGTGTTATTCTGTTA
TGGGAATTATCTCTTGCAGACAAAAAGTGGAGGCATGTGTTACAAGTACCACAACCACAT
AAGAAGGGTGTTACTTGCATTACTGGAATTATGGTTTCTGAAACTGATGTGATATTTGCA
TCTACCTCTTCAGATGGAACAATAAATGTGTGGGAACTGATCCTTCCATCCACTATTGGA
GGTGACTGCAAATTGTCATTTCTGGAATCTATTTTTGTTGGTTCAAAATCCATGGTGGCA
CTTTCATTATCAGAATTACCTGGAAATACTGGGCATGTAGTCCTGGCAGCTGGGGGCTTA
GATAATAAAGTTCATCTTTATTGCGGGGAGAGGACAGGAAAGTTTGTTCATGCTTGTGAG
TTAAAAGGGCATACAGATTGGATCCGGAGTTTGGACTTCTCCTTGCCTATATGCACCAAT
GATGGAACAAGCAGTCTTTTACTTGTAAGTTCATCTCAGGACAGAGGCATACGCATATGG
AAGATGGCTTCATGTAGTTCTCAATCCAATTCTAAGGGTACATTTAGGGAGGAAAAGATA
AGCTTGGCATCTTATATTGAAGGTCCTGTACTTGTTGCTGGCTCATCCTCGTATCAGATA
TCTCTGGAATCTCTTCTTATTGGACACGAGGATTGGGTTTATTCAGTGGAGTGGCAACCC
CCTTCAGTCACATCTGCAAATGGGTTTGCCTACTATCAACCACAAAGCATCTTATCTGCA
TCTATGGACAAGACAATGATGATCTGGCAACCTGAAAGGACTACTGGTATCTGGATGAAT
GTGGTCACTGTTGGGGAATTAAGTCATTGTGCTTTAGGGTTCTATGGTGGCCATTGGAGC
CCAAATGGAGATTCAATTTTGGCTCATGGTTACGGTGGATCTTTCCATCTCTGGAAAAAT
GTTGGTATCGAATATGACAATTGGCAACCACAAAAAGTTCCCTCTGGGCACTATGCAGCA
GTGACTGATATTGCATGGGCCAGGTCTGGTGAATATTTGCTCTCAGTCAGTGCTGACCAG
ACAACTCGAATTTTTGCATCTTGGCAAAATGAAGCTAGTTTTGGAGGTAGCGATTGTTGG
CATGAAATTGCTCGCCCTCAAGTTCATGGTCATGACATTAACTGTGTGACAATCATCCAT
GGAAAAGGGAACCATCGGTTTGTTAGTGGAGCTGATGAGAAGGTTGCCAGAGTGTTTGAG
GCTCCTCTGTCTTTTCTAAAGACATTAAATCATGCCATTTCACAAAAATCTAGTTTTCCT
GAAGACTTTCAAGTCGATGTTCAGATTTTGGGTGCAAATATGTCAGCTTTGGGACTATCA
CAGAAACCTATTTATGTTCATTCCACACATGAGAGTCCAGAAAGAAATGTCAATGATGGC
CTTGACACACTTGAAACCATTCCAGATGCAGTACCAGTTGTGTTAACTGAACCCCCCATT
GAAGAAAAATTGGCATGGCATACACTCTGGCCAGAGTCGCACAAACTCTATGGTCACGGG
AATGAGCTGTTTTCTTTGTGCTGTGACCAGGGAGGGAAGCTTGTTGCTTCATCATGTAAG
GCTCAATCAGCGAAAGTTGCAGAAATATGGCTATGGCAAGTGGGTTCATGGAAGGCAGTT
GGTCGCTTGCAATCTCACAGCTTAACAGTGACACAGATTGAATTTTCTCATGATGACAAT
CTGCTTTTGTCTGTCTCCAGGGATCGCCAGTTTTCTGTTTTTGCAATAAAAAGAACAGGT
GTGGACGAAGTCAGTCACCAGCTTATAGCAAGGCAGGAGGCACACAAAAGAATAATATGG
GCATGCTCTTGGAACCCATTTGGTCATGAATTTGCAACAGGTTCAAGGGACAAAACTGTG
AAGATCTGGGCTGTAGACAAGGGATCTTCAGTTAAGCAGCTCATGACTTTGCCACAGTTC
ACCAGTAGTGTCACCGCCTTATCTTGGTTTGCTCTTGATCATCAGAGAAACGATGGGTTT
CTTGCTGTTGGAATGGAAAGTGGACTCGTTGAATTGTGGAGCCTTTCGGTGACCAGAACC
GTAGATGGTAGCATGACAGTACCAGGTGTAACTGCTGCTCTTGTTAGACGGTTGGATCCA
TTTATGTGCCATGTTTCCTCTGTGCAGCGTTTAGCATGGAGGAAGTCTGAGGCAAGTGGA
GATTGCAAAAGCGTACTGCTTGCTTCTTGTGGAGCTGATCATTGTGTGAGAATTTTTGAG
GTCAATGTTGCGTAAAATACAATCAGATTATTAATTCTTGTACGGATAGTAATTATAACC
GAGTCAAGTTAGCGGGGAATTCAATTTTTATGGGGAATTTTTTG