Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_01s0011g03490.t01
CDS Infomation

cds chromosome:12X:1:3167509:3169015:1 gene:VIT_01s0011g03490 gene_biotype:protein_coding transcript_biotype:protein_coding description:3-ketoacyl-CoA synthase [Source:UniProtKB/TrEMBL;Acc:F6HEX0]
Sequence

ATGCCTCAAGCCTCGCCTGAGCTTTCCAGCTCCGTCAAGCTCAAGTATGTCAAGCTTGGC
TACCAGTATCTTGTCAACCACATTCTCACCCTATTGCTCATACCTATCATGGTTGGTGTT
CTCATTGAAGTTCTCCGTTTGGGTCCAGACGAGATTCTCAACCTTTGGAACTCTCTTCAT
TTTGATCTTGTCCAAATCCTTTGCTCTTCTTTTCTCATCATCTTCGCTACCACTGTCTAC
TTCATGTCCAAGCCACGATCCATTTATCTGGTAGACTACGCATGTTACAAGCCTCCGGTG
ATGCTCCGGGTTCCATTTGCGACCTTCATGGAGCATGCTAGGCTCGTCTTGAGCTCGCAG
CCTAAAAGTGTTGAATTCCAAACGAGAATTCTGGAACGATCCGGGCTTGGAGAGGAGACT
TGTTTGCCTCTCACGGTCCATTATATACCCCCTAGGCCGACGATGGAGGCAGCGAGAGAC
GAAGCGCAGCTTGTTATATTTTCTGCCATGGATTCTTTGTTGAATAAAACTGGGCTTAAG
CCTAAAGATATCGATATTCTTATCGTGAATTGTAGTATCTTCTCACCAACGCCGTCTTTA
TCGGCTATGGTGATCAATAAGTACAAGATGAGAAGCAACATAAAGAGCTTCAATCTCTCT
GGGATGGGGTGCAGTGCAGGGCTGATCTCCATTGATTTGGCTCGCGATCTTCTCCAAGTT
CATCCCAATTCCAATGCTGTTGTTGTTAGCACAGAGATCATAACACCGAATTGTTACCAA
GGGAATCAGAGAGCAATGCTTGTTCCCAACTGTCTATTCCGAATGGGTGGAGCTGCTATT
CTTCTAACCAACCGTAGATGGGAACACAGGCGGGCAAAGTACCGTCTTGTTCACGTGGTT
AGAACCCACAAAGGAGCCGACGATAAAGCTTACCGCTGCGTGATGGAAGAGGAAGACCCA
GAAGGCAAAGTAGGGATATCGCTCTCCAAAGATCTCATGGTCATAGCTGGAGAGGCTCTC
AAGACCAACATCACCACCACTGGCCCTCTCGTCCTTCCTGCATCAGAGCAACTTCTGTTT
CTTCTCACACTCATTGGCCGCAAAATCTTCAAACAAAACTGGAAGCCTTATATCCCAGAC
TTCAAGCTAGCTTTCGAGCACTTCTGCATCCACGCTGGCGGGCGTGCAGTGATCGATGAA
CTACAGCAGAACCTGCAGCTCTCGGCCGAGCACGTGGAGGCATCACGGATGGCGTTGCAC
CGTTTTGGGAACACATCTTCATCATCACTATGGTATGAGCTGAGCTACATTGAAGCAAAG
GGGAGGATGAAGAAGGGTGATAGAATTTGGCAGATAGCGTTCGGGAGTGGGTTCAAGTGT
AACAGCGCTATTTGGAAATGCAACCGCAGCATCGAGCCACCGAGGGATGGGCCTTGGCTT
GATTGTATTCACAGGTACCCAGTTCACATTCCTGAAGTGGTCAAGCTCTAG

Peptide Sequence

PEP ID

VIT_01s0011g03490.t01
PEP Infomation

pep chromosome:12X:1:3167509:3169015:1 gene:VIT_01s0011g03490 transcript:VIT_01s0011g03490.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:3-ketoacyl-CoA synthase [Source:UniProtKB/TrEMBL;Acc:F6HEX0]
Sequence

MPQASPELSSSVKLKYVKLGYQYLVNHILTLLLIPIMVGVLIEVLRLGPDEILNLWNSLH
FDLVQILCSSFLIIFATTVYFMSKPRSIYLVDYACYKPPVMLRVPFATFMEHARLVLSSQ
PKSVEFQTRILERSGLGEETCLPLTVHYIPPRPTMEAARDEAQLVIFSAMDSLLNKTGLK
PKDIDILIVNCSIFSPTPSLSAMVINKYKMRSNIKSFNLSGMGCSAGLISIDLARDLLQV
HPNSNAVVVSTEIITPNCYQGNQRAMLVPNCLFRMGGAAILLTNRRWEHRRAKYRLVHVV
RTHKGADDKAYRCVMEEEDPEGKVGISLSKDLMVIAGEALKTNITTTGPLVLPASEQLLF
LLTLIGRKIFKQNWKPYIPDFKLAFEHFCIHAGGRAVIDELQQNLQLSAEHVEASRMALH
RFGNTSSSSLWYELSYIEAKGRMKKGDRIWQIAFGSGFKCNSAIWKCNRSIEPPRDGPWL
DCIHRYPVHIPEVVKL

Transcript Sequence

Transcript ID

VIT_01s0011g03490.t01
Transcript Infomation

cdna chromosome:12X:1:3167509:3169015:1 gene:VIT_01s0011g03490 gene_biotype:protein_coding transcript_biotype:protein_coding description:3-ketoacyl-CoA synthase [Source:UniProtKB/TrEMBL;Acc:F6HEX0]
Sequence

CTCACTCACTGCCAAGATGCCTCAAGCCTCGCCTGAGCTTTCCAGCTCCGTCAAGCTCAA
GTATGTCAAGCTTGGCTACCAGTATCTTGTCAACCACATTCTCACCCTATTGCTCATACC
TATCATGGTTGGTGTTCTCATTGAAGTTCTCCGTTTGGGTCCAGACGAGATTCTCAACCT
TTGGAACTCTCTTCATTTTGATCTTGTCCAAATCCTTTGCTCTTCTTTTCTCATCATCTT
CGCTACCACTGTCTACTTCATGTCCAAGCCACGATCCATTTATCTGGTAGACTACGCATG
TTACAAGCCTCCGGTGATGCTCCGGGTTCCATTTGCGACCTTCATGGAGCATGCTAGGCT
CGTCTTGAGCTCGCAGCCTAAAAGTGTTGAATTCCAAACGAGAATTCTGGAACGATCCGG
GCTTGGAGAGGAGACTTGTTTGCCTCTCACGGTCCATTATATACCCCCTAGGCCGACGAT
GGAGGCAGCGAGAGACGAAGCGCAGCTTGTTATATTTTCTGCCATGGATTCTTTGTTGAA
TAAAACTGGGCTTAAGCCTAAAGATATCGATATTCTTATCGTGAATTGTAGTATCTTCTC
ACCAACGCCGTCTTTATCGGCTATGGTGATCAATAAGTACAAGATGAGAAGCAACATAAA
GAGCTTCAATCTCTCTGGGATGGGGTGCAGTGCAGGGCTGATCTCCATTGATTTGGCTCG
CGATCTTCTCCAAGTTCATCCCAATTCCAATGCTGTTGTTGTTAGCACAGAGATCATAAC
ACCGAATTGTTACCAAGGGAATCAGAGAGCAATGCTTGTTCCCAACTGTCTATTCCGAAT
GGGTGGAGCTGCTATTCTTCTAACCAACCGTAGATGGGAACACAGGCGGGCAAAGTACCG
TCTTGTTCACGTGGTTAGAACCCACAAAGGAGCCGACGATAAAGCTTACCGCTGCGTGAT
GGAAGAGGAAGACCCAGAAGGCAAAGTAGGGATATCGCTCTCCAAAGATCTCATGGTCAT
AGCTGGAGAGGCTCTCAAGACCAACATCACCACCACTGGCCCTCTCGTCCTTCCTGCATC
AGAGCAACTTCTGTTTCTTCTCACACTCATTGGCCGCAAAATCTTCAAACAAAACTGGAA
GCCTTATATCCCAGACTTCAAGCTAGCTTTCGAGCACTTCTGCATCCACGCTGGCGGGCG
TGCAGTGATCGATGAACTACAGCAGAACCTGCAGCTCTCGGCCGAGCACGTGGAGGCATC
ACGGATGGCGTTGCACCGTTTTGGGAACACATCTTCATCATCACTATGGTATGAGCTGAG
CTACATTGAAGCAAAGGGGAGGATGAAGAAGGGTGATAGAATTTGGCAGATAGCGTTCGG
GAGTGGGTTCAAGTGTAACAGCGCTATTTGGAAATGCAACCGCAGCATCGAGCCACCGAG
GGATGGGCCTTGGCTTGATTGTATTCACAGGTACCCAGTTCACATTCCTGAAGTGGTCAA
GCTCTAG