Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_01s0011g03400.t01
CDS Infomation

cds chromosome:12X:1:3076982:3080343:-1 gene:VIT_01s0011g03400 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGAGGTATGGAGAAGAAAGGCAGTCATGGGGGAAGGACTAAGGGTGGATTGATAACA
ATGCCCTTCATCTTTGCAAATGAGGCCTGTGAGAAGTTGGCCGTGGTGGGTTTCAGTGCA
AATATGATCACCTACTTGACACAGCAGCTGCATCTGCCGTTAACTAAAGCTGCAAACACC
ATCACCAACTTTAGCGGGACTGCAAGCTTGACGCCGTTGCTCGGAGCTTTCATCTCCGAT
GCATACGCCGGCCGGTTCTGGACTATTACAGTGGCTTCCATCTTATGGCAAATGGGGATG
ACAAGCTTAACACTCTCAGCAGTGCTTCCACAACTGAGGCCACCTCCATGTAAGGGTGAA
CATCAAGTCTGCCAAGAGGCTGATGGTGGGCAATTGGCAATCCTCTACGGTTCTCTGCTG
CTGACAGCTTTAGGGGCTGGAGGGATTCGACCCTGCGTGGTGGCATTCGGTGCCGACCAG
TTTGATGAGACCGATCCAAAGGAGAAGACAAAGACATGGAACTTTTTTAATTGGTACTAT
TTTGTGATGGGGGCATCCATACTTGTGGCTGTGACTGTGCTTGTTTACATTCAAGATAAT
GTTGGATGGGGGTGGGGACTTGGAATCCCAACCACGGCCATGTTTCTTTCAATTATTACC
TTTGTTGTGGGGTATCCGCTTTACAGGAATCTGGATCCTGTTGGGAGTCCATTTACTCGC
TTGTTACAAGTGTGTGTGGCTGCTTCCAAGAAGAGAAATCTACGTATGGTTTCTGATCCA
AATTTACTCTATGAGAACGACGAACTTGATGCCTCCATTTCTGCAGCTGGGAAGCTTCTT
CATACTAATGAATTGAAATTTCTTGACAAGGCGGCCATTGTGACCGAAGAAGATGACATC
AAATCTTCGCAAGCACCAAATCTGTGGAGATTGAATACCGTTCACAGAGTTGAAGAACTA
AAATCTGTGATCCGAATGGGGCCTATATGGGCATCCGGAATCCTCCTCATCACAGCCTAT
GCTCAACAGGGCACTTTCTCCCTCCAACAAGCCCGTACCATGGACAGACGCCTCATAAAT
TCCTTCCAAATTCCTCCTGGCTCCATGACTGTCTTCTCCATGTCCTCCATGCTCATAACA
ATTGCACTCTACGACCGGTTACTCATTCGTGTAGCCCGCCGGTTCACCGGCCTTGACCGG
GGCATCACCTTCCTGCAGAGGATGTGGATTGGGTTCGTAATCTCTATCGTAGCCACTCTA
GTCGCCGGGTTCGTGGAAGTGAAGCGGAAACAGGCAGCCTCGGCTTATGGGCTCGTCAAT
AGCCCTAAGTCCACCATCCCCATTTCGGTTCTCTGGCTGGTGCCGCAGTATAGCCTTCAT
GGGATTGCGGAAGCTTTCATGTCCATAGGACACCTTGAGTTTTTCTATGACCAAGCACCA
GAAAGCATGAAGAGCACAGGCAGTGCATTGTTTTGGACGGCGATCGCGTTTGGGAATTTT
GTCAGCACATTTCTTGTTTCTCTGGTGCACAAGTACAGTGCTGGCCCGGACGGATCAAAT
TGGCTTCCGGATGATAATTTGAATAAGGGGAAGTTGGAGAAGTTTTACTGGCTGCTCACA
TTGCTGCAAGTTGTGAATCTCATCTATTACTCATTCTGCGCCAAATTCTACACGTTCAAG
CCCATCCAAATCCGTATGAAAGAAGTTGACACATCTGAAGAAGATGGAATACAGCTCACG
AGTAGGGTTTAG

Peptide Sequence

PEP ID

VIT_01s0011g03400.t01
PEP Infomation

pep chromosome:12X:1:3076982:3080343:-1 gene:VIT_01s0011g03400 transcript:VIT_01s0011g03400.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MGGMEKKGSHGGRTKGGLITMPFIFANEACEKLAVVGFSANMITYLTQQLHLPLTKAANT
ITNFSGTASLTPLLGAFISDAYAGRFWTITVASILWQMGMTSLTLSAVLPQLRPPPCKGE
HQVCQEADGGQLAILYGSLLLTALGAGGIRPCVVAFGADQFDETDPKEKTKTWNFFNWYY
FVMGASILVAVTVLVYIQDNVGWGWGLGIPTTAMFLSIITFVVGYPLYRNLDPVGSPFTR
LLQVCVAASKKRNLRMVSDPNLLYENDELDASISAAGKLLHTNELKFLDKAAIVTEEDDI
KSSQAPNLWRLNTVHRVEELKSVIRMGPIWASGILLITAYAQQGTFSLQQARTMDRRLIN
SFQIPPGSMTVFSMSSMLITIALYDRLLIRVARRFTGLDRGITFLQRMWIGFVISIVATL
VAGFVEVKRKQAASAYGLVNSPKSTIPISVLWLVPQYSLHGIAEAFMSIGHLEFFYDQAP
ESMKSTGSALFWTAIAFGNFVSTFLVSLVHKYSAGPDGSNWLPDDNLNKGKLEKFYWLLT
LLQVVNLIYYSFCAKFYTFKPIQIRMKEVDTSEEDGIQLTSRV

Transcript Sequence

Transcript ID

VIT_01s0011g03400.t01
Transcript Infomation

cdna chromosome:12X:1:3076982:3080343:-1 gene:VIT_01s0011g03400 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AAGATGGGAGGTATGGAGAAGAAAGGCAGTCATGGGGGAAGGACTAAGGGTGGATTGATA
ACAATGCCCTTCATCTTTGCAAATGAGGCCTGTGAGAAGTTGGCCGTGGTGGGTTTCAGT
GCAAATATGATCACCTACTTGACACAGCAGCTGCATCTGCCGTTAACTAAAGCTGCAAAC
ACCATCACCAACTTTAGCGGGACTGCAAGCTTGACGCCGTTGCTCGGAGCTTTCATCTCC
GATGCATACGCCGGCCGGTTCTGGACTATTACAGTGGCTTCCATCTTATGGCAAATGGGG
ATGACAAGCTTAACACTCTCAGCAGTGCTTCCACAACTGAGGCCACCTCCATGTAAGGGT
GAACATCAAGTCTGCCAAGAGGCTGATGGTGGGCAATTGGCAATCCTCTACGGTTCTCTG
CTGCTGACAGCTTTAGGGGCTGGAGGGATTCGACCCTGCGTGGTGGCATTCGGTGCCGAC
CAGTTTGATGAGACCGATCCAAAGGAGAAGACAAAGACATGGAACTTTTTTAATTGGTAC
TATTTTGTGATGGGGGCATCCATACTTGTGGCTGTGACTGTGCTTGTTTACATTCAAGAT
AATGTTGGATGGGGGTGGGGACTTGGAATCCCAACCACGGCCATGTTTCTTTCAATTATT
ACCTTTGTTGTGGGGTATCCGCTTTACAGGAATCTGGATCCTGTTGGGAGTCCATTTACT
CGCTTGTTACAAGTGTGTGTGGCTGCTTCCAAGAAGAGAAATCTACGTATGGTTTCTGAT
CCAAATTTACTCTATGAGAACGACGAACTTGATGCCTCCATTTCTGCAGCTGGGAAGCTT
CTTCATACTAATGAATTGAAATTTCTTGACAAGGCGGCCATTGTGACCGAAGAAGATGAC
ATCAAATCTTCGCAAGCACCAAATCTGTGGAGATTGAATACCGTTCACAGAGTTGAAGAA
CTAAAATCTGTGATCCGAATGGGGCCTATATGGGCATCCGGAATCCTCCTCATCACAGCC
TATGCTCAACAGGGCACTTTCTCCCTCCAACAAGCCCGTACCATGGACAGACGCCTCATA
AATTCCTTCCAAATTCCTCCTGGCTCCATGACTGTCTTCTCCATGTCCTCCATGCTCATA
ACAATTGCACTCTACGACCGGTTACTCATTCGTGTAGCCCGCCGGTTCACCGGCCTTGAC
CGGGGCATCACCTTCCTGCAGAGGATGTGGATTGGGTTCGTAATCTCTATCGTAGCCACT
CTAGTCGCCGGGTTCGTGGAAGTGAAGCGGAAACAGGCAGCCTCGGCTTATGGGCTCGTC
AATAGCCCTAAGTCCACCATCCCCATTTCGGTTCTCTGGCTGGTGCCGCAGTATAGCCTT
CATGGGATTGCGGAAGCTTTCATGTCCATAGGACACCTTGAGTTTTTCTATGACCAAGCA
CCAGAAAGCATGAAGAGCACAGGCAGTGCATTGTTTTGGACGGCGATCGCGTTTGGGAAT
TTTGTCAGCACATTTCTTGTTTCTCTGGTGCACAAGTACAGTGCTGGCCCGGACGGATCA
AATTGGCTTCCGGATGATAATTTGAATAAGGGGAAGTTGGAGAAGTTTTACTGGCTGCTC
ACATTGCTGCAAGTTGTGAATCTCATCTATTACTCATTCTGCGCCAAATTCTACACGTTC
AAGCCCATCCAAATCCGTATGAAAGAAGTTGACACATCTGAAGAAGATGGAATACAGCTC
ACGAGTAGGGTTTAGTTGCATTTTAACCATACTGCTCCTCTTTCTCTAGGGATGTTGTAG
CTGACTTCTTCACTAGTAGTAGTCAAACTAGTCGCCACTGAACGGAACAGTGCGAAGGTT
GTGTACAGTAGGCATGTGAAATAATTAATAAAATGAAGCCTTTTTAGTA