Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_01s0011g03330.t01
CDS Infomation

cds chromosome:12X:1:3014379:3016292:-1 gene:VIT_01s0011g03330 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGGAAGAAGATTGATGCTCTCCTCGGAAGAAATTTCAAGACTTCCAAATTCAGAGCT
CTTGTCAACCTCGCCATCTCCCGGGCCGCCATCTTGAAGAAGCAGCGTCAGGTTCGCTGC
TCACAGGCGCGCTCCGACGTGGTTCAGCTCCTCAACCTTGGTCACCATGAAAGGGCGCTT
ATTCGGGTTGAGCAAGTGATCAAGGAGCAGAACATGCTGGACGTGTATGCTATGATCGAA
GGATATTGCCTTCTGTTGGTGGAGAGAGTCAGCATTATAGAAGAAGAAAAAGTGTGTCCT
GATGAACTGAAGGAGGCAGCGTCAGGTTTGCTTTATTCTACTTCAAGATGCGGGGAGTTC
CAAGAGCTGCGAGAGATCCGCGCAGTTTTAACATCTCGTTATGGGAAGGAATTTGTGGCT
CGTGCTGTTGAACTGCGCAACAATTGCGGTGTGAATCCTAGGTTGATACAAAAGCTGTCA
GTTAGGCCGCCGGATGTGGAGGTCAGATTGAATGAGCTGAAAGAAATTGCTTCAGAGAAT
GGCATCACTCTGCAATTAGAGGGGGCTTCTTCTGCTACCTTGGAGGATAAATTGGACAAA
AACCAGATGGAAAACCAGCCCAAGCCAGACCAATCAGCTAATTCAGGCGGGGCGAAGCCT
GAGGAGAGTTTGTTGCCAGAAGATCAGATAGAAAAGGGCGAAGGGTTCTCTGGTTCAATG
AAAACAAGGAAGAAGTATAAGGATGTGGCTGATGCAGCTCAAGCAGCTTTTGAGTCAGCA
GCTTATGCAGCAGCAGCTGCGAGAGCTGCTGTGGAGCTATCTCGAACTGAATCCCATGAT
CCTGATGATCAAAACAGTCCCCATCCTCGGCGAAGGTTAGTATCTGATGGTGATGAGTCT
AAACATGAAGCTGCAGGCAAAAAGGATTCGGGTGAGATTGAGAAATCAGATGATGGATTG
GCATTAGAGAAGATCCATCCGGTTGAGAACCAGGATTCTGAATCGGAAGATGAGGAAATC
CACAATGAAAGTCAAGCTCAACAGTCCAAATGGAAAAAGAAAGCAGCAGAATTGATGAGA
CCGATGTCCTCTTCAAGTTCAGATTCAGCTGGGGGCAGTTTAAATGTGAATTCAATGTCT
TCAGATGTAATGAAGCTATTGGAGAAGGATATTGTGTTGGATGACAGCGATGATGAAAGT
GGGAACAAACACAGTGGTAACTTGAGCTCTGATATGAAACCTGCCCTGCAGATCCCTTCA
AGTTCTCAAGTGGATATAAAGGCAAGAGCAGGACCAAAGAACCACATAGCACAGCCTGCT
GAGGGTTTGGGAATGCCAAGTGTGCAGCATTTGAACACAGGGAAGAGGCCTTTTTCTGTG
AGAACCAGAGGAGTGCGAGGTTACTGA

Peptide Sequence

PEP ID

VIT_01s0011g03330.t01
PEP Infomation

pep chromosome:12X:1:3014379:3016292:-1 gene:VIT_01s0011g03330 transcript:VIT_01s0011g03330.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MGKKIDALLGRNFKTSKFRALVNLAISRAAILKKQRQVRCSQARSDVVQLLNLGHHERAL
IRVEQVIKEQNMLDVYAMIEGYCLLLVERVSIIEEEKVCPDELKEAASGLLYSTSRCGEF
QELREIRAVLTSRYGKEFVARAVELRNNCGVNPRLIQKLSVRPPDVEVRLNELKEIASEN
GITLQLEGASSATLEDKLDKNQMENQPKPDQSANSGGAKPEESLLPEDQIEKGEGFSGSM
KTRKKYKDVADAAQAAFESAAYAAAAARAAVELSRTESHDPDDQNSPHPRRRLVSDGDES
KHEAAGKKDSGEIEKSDDGLALEKIHPVENQDSESEDEEIHNESQAQQSKWKKKAAELMR
PMSSSSSDSAGGSLNVNSMSSDVMKLLEKDIVLDDSDDESGNKHSGNLSSDMKPALQIPS
SSQVDIKARAGPKNHIAQPAEGLGMPSVQHLNTGKRPFSVRTRGVRGY

Transcript Sequence

Transcript ID

VIT_01s0011g03330.t01
Transcript Infomation

cdna chromosome:12X:1:3014379:3016292:-1 gene:VIT_01s0011g03330 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CTTGTTTGTGCTCTTCCGCCTACTGTACTGCTTCCGCCACCTTTCAGTCCTCATCTGACA
TCACATAAGCTTGGTGGTAGAGCAGGACATGGGGAAGAAGATTGATGCTCTCCTCGGAAG
AAATTTCAAGACTTCCAAATTCAGAGCTCTTGTCAACCTCGCCATCTCCCGGGCCGCCAT
CTTGAAGAAGCAGCGTCAGGTTCGCTGCTCACAGGCGCGCTCCGACGTGGTTCAGCTCCT
CAACCTTGGTCACCATGAAAGGGCGCTTATTCGGGTTGAGCAAGTGATCAAGGAGCAGAA
CATGCTGGACGTGTATGCTATGATCGAAGGATATTGCCTTCTGTTGGTGGAGAGAGTCAG
CATTATAGAAGAAGAAAAAGTGTGTCCTGATGAACTGAAGGAGGCAGCGTCAGGTTTGCT
TTATTCTACTTCAAGATGCGGGGAGTTCCAAGAGCTGCGAGAGATCCGCGCAGTTTTAAC
ATCTCGTTATGGGAAGGAATTTGTGGCTCGTGCTGTTGAACTGCGCAACAATTGCGGTGT
GAATCCTAGGTTGATACAAAAGCTGTCAGTTAGGCCGCCGGATGTGGAGGTCAGATTGAA
TGAGCTGAAAGAAATTGCTTCAGAGAATGGCATCACTCTGCAATTAGAGGGGGCTTCTTC
TGCTACCTTGGAGGATAAATTGGACAAAAACCAGATGGAAAACCAGCCCAAGCCAGACCA
ATCAGCTAATTCAGGCGGGGCGAAGCCTGAGGAGAGTTTGTTGCCAGAAGATCAGATAGA
AAAGGGCGAAGGGTTCTCTGGTTCAATGAAAACAAGGAAGAAGTATAAGGATGTGGCTGA
TGCAGCTCAAGCAGCTTTTGAGTCAGCAGCTTATGCAGCAGCAGCTGCGAGAGCTGCTGT
GGAGCTATCTCGAACTGAATCCCATGATCCTGATGATCAAAACAGTCCCCATCCTCGGCG
AAGGTTAGTATCTGATGGTGATGAGTCTAAACATGAAGCTGCAGGCAAAAAGGATTCGGG
TGAGATTGAGAAATCAGATGATGGATTGGCATTAGAGAAGATCCATCCGGTTGAGAACCA
GGATTCTGAATCGGAAGATGAGGAAATCCACAATGAAAGTCAAGCTCAACAGTCCAAATG
GAAAAAGAAAGCAGCAGAATTGATGAGACCGATGTCCTCTTCAAGTTCAGATTCAGCTGG
GGGCAGTTTAAATGTGAATTCAATGTCTTCAGATGTAATGAAGCTATTGGAGAAGGATAT
TGTGTTGGATGACAGCGATGATGAAAGTGGGAACAAACACAGTGGTAACTTGAGCTCTGA
TATGAAACCTGCCCTGCAGATCCCTTCAAGTTCTCAAGTGGATATAAAGGCAAGAGCAGG
ACCAAAGAACCACATAGCACAGCCTGCTGAGGGTTTGGGAATGCCAAGTGTGCAGCATTT
GAACACAGGGAAGAGGCCTTTTTCTGTGAGAACCAGAGGAGTGCGAGGTTACTGAGAGGC
ATAGGAGTGTGTCAAAAATTTGTTGATTTTAAGTTG