Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_01s0011g03280.t01
CDS Infomation

cds chromosome:12X:1:2967860:2979364:-1 gene:VIT_01s0011g03280 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCTATGGTGGACGAGCCACTTTATCCAATCGCTGTTCTGATAGATGAGTTGAAAAAT
GCTGACATCCAGCTGCGGTTGAACTCAATTCGTCGGCTATCCACAATTGCACGTGCACTG
GGGGAGGAGCGAACCCGAAATGAATTGATCCCATTTCTTAGTGAGAACAATGATGATGAT
GATGAGGTGCTTCTTGCAATGACTGAAGAATTGGGAGTGTTCATTCCTTATGTTGGGGGA
CTGGAGCATGCCTGTGTTTTGCTACCACCTTTGGAAACTCTTTGCACTGTGGAGGAAACC
CGTGTGAGGGATAAAGCCGTGGAGTCTTTGTGTAGAATTGGTTCTCAAATGAAGGAAAAT
GATTTGATTAACTGGTTTATTCCTTTGGTGAAGAGACTGGCATCTGGTGAATGGTTTACT
GCTCGAGTTTCTGCATGTGGACTGTTTCATATTGCTTACCCAAGTGCCCCAGAGATGTTA
AAGATGGAGTTGCGGGCAATATACAGTCAATTGTGTCAAGATGACATGCCCATGGTGAGG
AGATCTGCCGCATCAAGCCTGTGGAAGTTTTCTGCAACAGTTGAGCCTGTTCATTTGAAG
AATGACATCATGACAATATTTGAAAATCTTACACAGGATGATCAAGATTCAGTCAGGTTA
TTGGTTGTTGAGGGTTGTGCCACACTGGGCAAGTTATTAGAGCCCCAGGAATGCATTGCA
CGTATTCTCCCTGTTATTATCAGCTTTTCTCAGGACAGATCTTGGCGTGTTCGCTACATG
GTTGCAGATCAATTATATGAGCTTTGTCATGCTGTAGGGCCTGAAGCTACCAGAACGGAC
TTGGTTCCCGCTTATATGCGGTTACTTCGAGATAATGAGGCTGAAGTACGAATAGCAGCT
GCTGGCAAAGTAACTAAATTCTGTCAGATCTTAAATCCAGAACTTGCAATTCATCATATT
CTTCCCTGTGTAAAGGAATTGTCATTAGATTCGTCCCAGCATGTCCGCTCTGCCTTGGCT
TCAGTTTTAATGGGAATGGCTCCCGTCTTAGGAAAGGATGCAACAATTGATCAACTTCTT
CCAATTTTTCTTTCTCTTTTGAAGGATGACTTTCCTGATGTACGACTAAATATCATTAGC
AAGCTTGATCAAATAAATCAGGTTATTGGAACTGATCTATTGTCCCAATCCCTATTACCG
GCCATTGTTGAGCTTGCAGAGGATAGACATTGGAGGGTTCGACTTGCAATAATAGAGTAT
ATTCCTTTGTTGGCAAGTCAGTTGGGTATAAAGTTTTTTGATGATGAGCTTGGTGCTCTT
TGCATGCAGTGGCTACAGGATAAGGTTTACTCCATTCGTGATGCTGCTGCTAACAACTTA
AAGCGCCTTGCAGAAGAATTTGGTCCTGACTGGGCAATGCAGCACTTAATTCCACAGGTC
TTGGAGATGATTAACAATTCACACTATTTGTATCGGATGACTGTTCTACGGGCAATTTCC
CTACTTGCCCCTGCCATGGGCGCAGAAATTACTTATTCGAAACTGTTGCCGGTGGTCATC
AGTGCATCCAATGACAGGGTGCCCAATGTCAAATTCAATGTTGCCAAGGTGCTGCAGTCC
CTGATTCCTATAGTTGATCATTCTGTGGTGGAAAAGACGATCCGACCGTGTTTGGTTGAG
CTTAGTGAGGACCCAGATGTAGATGTCCGCTTCTCTGCCAACCAAGCAATCCATGTGATT
GATCACGTCATGATGTCTAGCTAG

Peptide Sequence

PEP ID

VIT_01s0011g03280.t01
PEP Infomation

pep chromosome:12X:1:2967860:2979364:-1 gene:VIT_01s0011g03280 transcript:VIT_01s0011g03280.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAMVDEPLYPIAVLIDELKNADIQLRLNSIRRLSTIARALGEERTRNELIPFLSENNDDD
DEVLLAMTEELGVFIPYVGGLEHACVLLPPLETLCTVEETRVRDKAVESLCRIGSQMKEN
DLINWFIPLVKRLASGEWFTARVSACGLFHIAYPSAPEMLKMELRAIYSQLCQDDMPMVR
RSAASSLWKFSATVEPVHLKNDIMTIFENLTQDDQDSVRLLVVEGCATLGKLLEPQECIA
RILPVIISFSQDRSWRVRYMVADQLYELCHAVGPEATRTDLVPAYMRLLRDNEAEVRIAA
AGKVTKFCQILNPELAIHHILPCVKELSLDSSQHVRSALASVLMGMAPVLGKDATIDQLL
PIFLSLLKDDFPDVRLNIISKLDQINQVIGTDLLSQSLLPAIVELAEDRHWRVRLAIIEY
IPLLASQLGIKFFDDELGALCMQWLQDKVYSIRDAAANNLKRLAEEFGPDWAMQHLIPQV
LEMINNSHYLYRMTVLRAISLLAPAMGAEITYSKLLPVVISASNDRVPNVKFNVAKVLQS
LIPIVDHSVVEKTIRPCLVELSEDPDVDVRFSANQAIHVIDHVMMSS

Transcript Sequence

Transcript ID

VIT_01s0011g03280.t01
Transcript Infomation

cdna chromosome:12X:1:2967860:2979364:-1 gene:VIT_01s0011g03280 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AGTGAGAAACGTTTTAGATACAATGGCTATGGTGGACGAGCCACTTTATCCAATCGCTGT
TCTGATAGATGAGTTGAAAAATGCTGACATCCAGCTGCGGTTGAACTCAATTCGTCGGCT
ATCCACAATTGCACGTGCACTGGGGGAGGAGCGAACCCGAAATGAATTGATCCCATTTCT
TAGTGAGAACAATGATGATGATGATGAGGTGCTTCTTGCAATGACTGAAGAATTGGGAGT
GTTCATTCCTTATGTTGGGGGACTGGAGCATGCCTGTGTTTTGCTACCACCTTTGGAAAC
TCTTTGCACTGTGGAGGAAACCCGTGTGAGGGATAAAGCCGTGGAGTCTTTGTGTAGAAT
TGGTTCTCAAATGAAGGAAAATGATTTGATTAACTGGTTTATTCCTTTGGTGAAGAGACT
GGCATCTGGTGAATGGTTTACTGCTCGAGTTTCTGCATGTGGACTGTTTCATATTGCTTA
CCCAAGTGCCCCAGAGATGTTAAAGATGGAGTTGCGGGCAATATACAGTCAATTGTGTCA
AGATGACATGCCCATGGTGAGGAGATCTGCCGCATCAAGCCTGTGGAAGTTTTCTGCAAC
AGTTGAGCCTGTTCATTTGAAGAATGACATCATGACAATATTTGAAAATCTTACACAGGA
TGATCAAGATTCAGTCAGGTTATTGGTTGTTGAGGGTTGTGCCACACTGGGCAAGTTATT
AGAGCCCCAGGAATGCATTGCACGTATTCTCCCTGTTATTATCAGCTTTTCTCAGGACAG
ATCTTGGCGTGTTCGCTACATGGTTGCAGATCAATTATATGAGCTTTGTCATGCTGTAGG
GCCTGAAGCTACCAGAACGGACTTGGTTCCCGCTTATATGCGGTTACTTCGAGATAATGA
GGCTGAAGTACGAATAGCAGCTGCTGGCAAAGTAACTAAATTCTGTCAGATCTTAAATCC
AGAACTTGCAATTCATCATATTCTTCCCTGTGTAAAGGAATTGTCATTAGATTCGTCCCA
GCATGTCCGCTCTGCCTTGGCTTCAGTTTTAATGGGAATGGCTCCCGTCTTAGGAAAGGA
TGCAACAATTGATCAACTTCTTCCAATTTTTCTTTCTCTTTTGAAGGATGACTTTCCTGA
TGTACGACTAAATATCATTAGCAAGCTTGATCAAATAAATCAGGTTATTGGAACTGATCT
ATTGTCCCAATCCCTATTACCGGCCATTGTTGAGCTTGCAGAGGATAGACATTGGAGGGT
TCGACTTGCAATAATAGAGTATATTCCTTTGTTGGCAAGTCAGTTGGGTATAAAGTTTTT
TGATGATGAGCTTGGTGCTCTTTGCATGCAGTGGCTACAGGATAAGGTTTACTCCATTCG
TGATGCTGCTGCTAACAACTTAAAGCGCCTTGCAGAAGAATTTGGTCCTGACTGGGCAAT
GCAGCACTTAATTCCACAGGTCTTGGAGATGATTAACAATTCACACTATTTGTATCGGAT
GACTGTTCTACGGGCAATTTCCCTACTTGCCCCTGCCATGGGCGCAGAAATTACTTATTC
GAAACTGTTGCCGGTGGTCATCAGTGCATCCAATGACAGGGTGCCCAATGTCAAATTCAA
TGTTGCCAAGGTGCTGCAGTCCCTGATTCCTATAGTTGATCATTCTGTGGTGGAAAAGAC
GATCCGACCGTGTTTGGTTGAGCTTAGTGAGGACCCAGATGTAGATGTCCGCTTCTCTGC
CAACCAAGCAATCCATGTGATTGATCACGTCATGATGTCTAGCTAGAAAGGATTCTTATA
TAGTTGGAACCAAACCGAACCGAACCTCTGCCGTTACTCCACATCATATTACTTGTATCT
TCTCGGGCCATTCCTGGCTACTAAGGACTGCTTTAGTGTTTATGAAACATCTGCAACATC
GCATGATTGCCACTTTTTTTGTGTATCTTTTAATCGTTTATTCCTTTTTCATGAGAAA