Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_01s0011g03010.t01
CDS Infomation

cds chromosome:12X:1:2692236:2698927:-1 gene:VIT_01s0011g03010 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCAACTATTGCAACAAGGGTAGTGGAGGGACTAGGTCTTGGCCATGCCAAGCTCCAT
GCTTTTAGTCCCAAACACCCGTCTCCATTTCTGGGCAAAAAGCTCAGGTCTCAGTCACTG
TCACTGCCCAGTAAAAAAGCCGTCTCCAACTTGGTATGTGCGGCAGGAGGTGGATTTTTC
AATCTTGTTCACGATGTTTTTTTGGGTGTTGGAGTGGGGCTGCCGTGTACAGTCATGGAG
TGCGGCGATATCATATACCGGAGTACGCTACCCCGATCAAACGGTCTCACACTCACGGCT
CCCGGCGCTATTTTGGCGCTGGGTGCTCTGTCTTACCTGTGGGCTACACCTGGTGTGGCT
CCTGGGTTCTTTGATATGTTTGTTCTTGCTTTTGTTGAGAGATTGTTTAGGCCATCTTTT
AAGAAGGAGGATTTTGTGCTGGGGAAGAAGTTGGGGGAGGGAGCTTTCGGTGTGGTTTAT
AGGGTTTCATTAGCAAAGAAACCAGGGGCAAAGGAAGGTGACTTAGTCTTGAAAAAGGCT
ACTGAATATGGTGCCGTGGAGATTTGGATGAATGAGCGTGCACGAAGGGCTTGCGCAAAT
AGCTGTGCCTACTTTGTCTATGGCTTTCTTGAGAGTTCTTCAAAGAAAGGAAGTGAATAC
TGGCTTCTATGGCGGTATGAAGGGGAGTCCACACTTACAGATCTGATGCTGAGTAAAGAG
TTTCCATACAACGTGGAAAGTATGATTCTTGGAGAGGTTCCAGACTTGCCTAAGGGGCTG
GAAAGGGAAAACAAAATCATTCAGACAATCATGAGGCAGCTTTTATTTGCATTGGATAGT
CTTCACTCAACTGGGATTGTTCATAGAGATATTAAGCCACAAAATATTATTTTTTCTGAA
GGGTCTCGCACATTCAAGATCATTGATCTTGGAGCTGCAGCAGATTTGAGAGTAGGGATC
AATTATATTCCAAAGGAGTTTCTTTTGGACCCCAGATATGCAGCACCAGAGCAATACATC
ATGAGCACACAAACTCCTTCTGCACCCTCAGCTCCAGTGGCAACTGCACTTTCCCCAGTC
CTATGGCAGATGAATTTGCCAGATAGATTTGACATCTACAGTGCTGGTCTCATTTTCCTA
CAAATGGCATTCCCATCATTGAGGACTGATAGTAGCCTCATACAATTCAACCGCCAACTC
AAGAGGTGTGAATATGATTTAGTTGCATGGAGGAAGACTGTGGAGCCTCGTGCTAGCCCT
GACCTGCGGAGGGGCTTTGAGTTGTTGGATTTAGATGGTGGAATAGGATGGGAACTTCTA
ACGTCAATGGTTCGTTTCAAAGCACGACGAAGAACCAGTGCAAAAGCAGCCTTAGCTCAT
CCCTACTTTGATAGGGAAGGCTTATCAGTGCTGTCCCTCACACAGAAGCTAAGGCTGCAA
CTCTTTCGAACTACACAACAGGATTATGGGGAAGCTGCCAAATGGATTATTCGGCTAATG
GCAAAATCAGGAACAAAGCAGGACGGTGGCTTCACTGAAGCTCAACTTCAGGAACTCAGA
GAAATACAGCCTAAGAAGAAGGGAAATTCGCAAAGGAATGCTCTTGCTTCCGTTCTTCGG
CTGCAGAGGAAGATAGTAAGAACACTGAATGAGAGCATGGATGACCTTAACCGACGCAGG
AAGAGCCTTTGGTGGAGCAGGTGGATCCCCAGAGAAGAATGA

Peptide Sequence

PEP ID

VIT_01s0011g03010.t01
PEP Infomation

pep chromosome:12X:1:2692236:2698927:-1 gene:VIT_01s0011g03010 transcript:VIT_01s0011g03010.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MATIATRVVEGLGLGHAKLHAFSPKHPSPFLGKKLRSQSLSLPSKKAVSNLVCAAGGGFF
NLVHDVFLGVGVGLPCTVMECGDIIYRSTLPRSNGLTLTAPGAILALGALSYLWATPGVA
PGFFDMFVLAFVERLFRPSFKKEDFVLGKKLGEGAFGVVYRVSLAKKPGAKEGDLVLKKA
TEYGAVEIWMNERARRACANSCAYFVYGFLESSSKKGSEYWLLWRYEGESTLTDLMLSKE
FPYNVESMILGEVPDLPKGLERENKIIQTIMRQLLFALDSLHSTGIVHRDIKPQNIIFSE
GSRTFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPV
LWQMNLPDRFDIYSAGLIFLQMAFPSLRTDSSLIQFNRQLKRCEYDLVAWRKTVEPRASP
DLRRGFELLDLDGGIGWELLTSMVRFKARRRTSAKAALAHPYFDREGLSVLSLTQKLRLQ
LFRTTQQDYGEAAKWIIRLMAKSGTKQDGGFTEAQLQELREIQPKKKGNSQRNALASVLR
LQRKIVRTLNESMDDLNRRRKSLWWSRWIPREE

Transcript Sequence

Transcript ID

VIT_01s0011g03010.t01
Transcript Infomation

cdna chromosome:12X:1:2692236:2698927:-1 gene:VIT_01s0011g03010 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GGCGTGTGGTCTCAAATTGGTAGCAAATCTAACTGTAAACTGTATGTACGGGCATGGCAA
CTATTGCAACAAGGGTAGTGGAGGGACTAGGTCTTGGCCATGCCAAGCTCCATGCTTTTA
GTCCCAAACACCCGTCTCCATTTCTGGGCAAAAAGCTCAGGTCTCAGTCACTGTCACTGC
CCAGTAAAAAAGCCGTCTCCAACTTGGTATGTGCGGCAGGAGGTGGATTTTTCAATCTTG
TTCACGATGTTTTTTTGGGTGTTGGAGTGGGGCTGCCGTGTACAGTCATGGAGTGCGGCG
ATATCATATACCGGAGTACGCTACCCCGATCAAACGGTCTCACACTCACGGCTCCCGGCG
CTATTTTGGCGCTGGGTGCTCTGTCTTACCTGTGGGCTACACCTGGTGTGGCTCCTGGGT
TCTTTGATATGTTTGTTCTTGCTTTTGTTGAGAGATTGTTTAGGCCATCTTTTAAGAAGG
AGGATTTTGTGCTGGGGAAGAAGTTGGGGGAGGGAGCTTTCGGTGTGGTTTATAGGGTTT
CATTAGCAAAGAAACCAGGGGCAAAGGAAGGTGACTTAGTCTTGAAAAAGGCTACTGAAT
ATGGTGCCGTGGAGATTTGGATGAATGAGCGTGCACGAAGGGCTTGCGCAAATAGCTGTG
CCTACTTTGTCTATGGCTTTCTTGAGAGTTCTTCAAAGAAAGGAAGTGAATACTGGCTTC
TATGGCGGTATGAAGGGGAGTCCACACTTACAGATCTGATGCTGAGTAAAGAGTTTCCAT
ACAACGTGGAAAGTATGATTCTTGGAGAGGTTCCAGACTTGCCTAAGGGGCTGGAAAGGG
AAAACAAAATCATTCAGACAATCATGAGGCAGCTTTTATTTGCATTGGATAGTCTTCACT
CAACTGGGATTGTTCATAGAGATATTAAGCCACAAAATATTATTTTTTCTGAAGGGTCTC
GCACATTCAAGATCATTGATCTTGGAGCTGCAGCAGATTTGAGAGTAGGGATCAATTATA
TTCCAAAGGAGTTTCTTTTGGACCCCAGATATGCAGCACCAGAGCAATACATCATGAGCA
CACAAACTCCTTCTGCACCCTCAGCTCCAGTGGCAACTGCACTTTCCCCAGTCCTATGGC
AGATGAATTTGCCAGATAGATTTGACATCTACAGTGCTGGTCTCATTTTCCTACAAATGG
CATTCCCATCATTGAGGACTGATAGTAGCCTCATACAATTCAACCGCCAACTCAAGAGGT
GTGAATATGATTTAGTTGCATGGAGGAAGACTGTGGAGCCTCGTGCTAGCCCTGACCTGC
GGAGGGGCTTTGAGTTGTTGGATTTAGATGGTGGAATAGGATGGGAACTTCTAACGTCAA
TGGTTCGTTTCAAAGCACGACGAAGAACCAGTGCAAAAGCAGCCTTAGCTCATCCCTACT
TTGATAGGGAAGGCTTATCAGTGCTGTCCCTCACACAGAAGCTAAGGCTGCAACTCTTTC
GAACTACACAACAGGATTATGGGGAAGCTGCCAAATGGATTATTCGGCTAATGGCAAAAT
CAGGAACAAAGCAGGACGGTGGCTTCACTGAAGCTCAACTTCAGGAACTCAGAGAAATAC
AGCCTAAGAAGAAGGGAAATTCGCAAAGGAATGCTCTTGCTTCCGTTCTTCGGCTGCAGA
GGAAGATAGTAAGAACACTGAATGAGAGCATGGATGACCTTAACCGACGCAGGAAGAGCC
TTTGGTGGAGCAGGTGGATCCCCAGAGAAGAATGAAGATTGTGAATATGTATATTTGTCT
TTCTGTAAATTATGTGCAGCTATCTTAACCAACTGTTTTGGTAGAAGGAAATGATGGTTA
AGGATGAA