Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_01s0011g02820.t01
CDS Infomation

cds chromosome:12X:1:2508191:2516979:1 gene:VIT_01s0011g02820 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCGGTGGAAGCTTCGAGATCGAGCTCGTCGGCCGATTCCTACATCGGGAGCTTGATT
AGTTTGACATCCAAAAGCGAGATCAGGTACGAGGGCGTTCTCTACAACATCAACACCGAG
GAGTCCAGCATCGGATTGCGAAACGTAAGGTCATTCGGTACAGAAGGACGAAAGAAGGAT
GGTCCCCAAGTCCCTCCAAGTGACAAAGTTTATGAATACATCCTATTTCGTGGAAGTGAC
ATCAAGGATTTGCAGGTTAAGTCTTCACCTCCTGTTCAGGCTACACCACCTATAAACAAT
GACCCTGCTATTATTCAGTCTCACTATCCTCGCCCAGCTACCACATCTGCAAGCTTGCCA
TCTACTGTTAGTGGGCCTTTGCCAGATCTTAGTTCCCACAATGCACAGTTGGGACTTCCT
GGGTCAACTTTTCAAGGTGGTCTGCCTCTATATCAACCTGGAGGGAATTTAGGATCCTGG
GGCCCTGCACCGCCTCCCCCTACCGCAAATGGCAGTGGCCTTACCATGCCTATGTATTGG
CAAGGATACTATGGTCCCCCAAATGGGCTTCCTCATTTACACCAACAATCTTTGCTTCGG
CCCCCACCTGTTCTGTCAATGCCTCCAATGCAATATCCTGGTTTCAATGCCTCTTTACAG
CCAGGAGCTCCAAATTTGCCTGGTTCGAATCTACCGGAATATTCTTCTCCTTTGCTTCCA
ACCAGTAGTGGTTCCCTTAATTTAACCTCTACTTCTTTATCACCATCTACTCTGCCTTCA
AATCTGCCTTCAAGTATGCCTTCAATTCTACCTTCAAGCATGCCTTCAATTCTGCCCTCA
ACTCTGCCTTCTGCATTGCCTCCTGTACCATCTGCTGCTTTAGCTTCTGAAACCTTATCC
AGTTTGATGCCAAATAAGGTTCCTAATCCTACTCTTCCTTCAGTAACACTAGGTATTAGC
TTGCCATTAGTCACTCCTTTGAATACATCCAGTTCGGAGATAAATGCTATTGCACCACCA
ATTTCTAACAAGCCTAATGCAGTTTCTGGTCCAACATTGCCTTATCAAACCATATCTCAG
TCCATTCCCTCTGTTGGGACATCTAGTCCAAATCATCCAGAAATAGCAGCACCTTCACTG
GTAACCCCAGGTCAGTTGTTGCAGTCTGGACCAACCACAATTTCTTCATCTCCGTCTTCA
CAAACAGCTCACAAGGATGTGGAGGTGGTTCAGGTATCATCATCAGCCTCACAAGAATCA
TCAGTTCCGGTGTCAGCAGAAGCTCAACCACCGATATTACCTCTACCAGTACCTTCTCGA
ACTGTTCAAAAGTTGAATGGTGCTCCTTTCCAAGGTCGTCATGGTTACCGGGGACGTGGA
AGAGGAACAGGGGGCTCACGTCCAGTGACAAAATTCACTGAGGATTTTGATTTCATGGCA
ATGAATGAGAAATTCAAGAAGGATGAAGTATGGGGTCATCTTGGTAAAGGTAATAAATCT
CAGTCAAGGGACAAAGAAGTTGATGGAAAAGTCAGCGATGAAGATGATTACGAAGATGAA
GATGATGCTGAATTACCAAAGTTTGAGGTCAAGCCCATCTATAATAAGGATGACTTCTTT
GATTCCCTCTCTTGTAATGCCCTTGACCATGATTCACATAATGGAAGGACTAGGTTCTCC
GAACAAATGAAGATTGATACTGAGACTTTCGGTGATTTTCCTAGACATCGGGGTGGTCGA
GGTGGGCGTGGGCCCAATCGTGGAGGGCGTGGTCGGGGTCCTTATTATGGAAGGGGTTAT
GGCTATGTTGGGAGGGGCCGTGGACGGGCTATGCCCAGTCGTGGTCCCTAA

Peptide Sequence

PEP ID

VIT_01s0011g02820.t01
PEP Infomation

pep chromosome:12X:1:2508191:2516979:1 gene:VIT_01s0011g02820 transcript:VIT_01s0011g02820.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAVEASRSSSSADSYIGSLISLTSKSEIRYEGVLYNINTEESSIGLRNVRSFGTEGRKKD
GPQVPPSDKVYEYILFRGSDIKDLQVKSSPPVQATPPINNDPAIIQSHYPRPATTSASLP
STVSGPLPDLSSHNAQLGLPGSTFQGGLPLYQPGGNLGSWGPAPPPPTANGSGLTMPMYW
QGYYGPPNGLPHLHQQSLLRPPPVLSMPPMQYPGFNASLQPGAPNLPGSNLPEYSSPLLP
TSSGSLNLTSTSLSPSTLPSNLPSSMPSILPSSMPSILPSTLPSALPPVPSAALASETLS
SLMPNKVPNPTLPSVTLGISLPLVTPLNTSSSEINAIAPPISNKPNAVSGPTLPYQTISQ
SIPSVGTSSPNHPEIAAPSLVTPGQLLQSGPTTISSSPSSQTAHKDVEVVQVSSSASQES
SVPVSAEAQPPILPLPVPSRTVQKLNGAPFQGRHGYRGRGRGTGGSRPVTKFTEDFDFMA
MNEKFKKDEVWGHLGKGNKSQSRDKEVDGKVSDEDDYEDEDDAELPKFEVKPIYNKDDFF
DSLSCNALDHDSHNGRTRFSEQMKIDTETFGDFPRHRGGRGGRGPNRGGRGRGPYYGRGY
GYVGRGRGRAMPSRGP

Transcript Sequence

Transcript ID

VIT_01s0011g02820.t01
Transcript Infomation

cdna chromosome:12X:1:2508191:2516979:1 gene:VIT_01s0011g02820 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AAAAATCCGAATCCAAACACACCGTCTGTCTCTCTCGCTCGCTCTCCCCCTTCTGCTATT
CTCTTTCTCTCTCTAAAACCCTTGGCTTCTCTCTCTTCGCATGCTCTGCTTCCATGGCGG
TGGAAGCTTCGAGATCGAGCTCGTCGGCCGATTCCTACATCGGGAGCTTGATTAGTTTGA
CATCCAAAAGCGAGATCAGGTACGAGGGCGTTCTCTACAACATCAACACCGAGGAGTCCA
GCATCGGATTGCGAAACGTAAGGTCATTCGGTACAGAAGGACGAAAGAAGGATGGTCCCC
AAGTCCCTCCAAGTGACAAAGTTTATGAATACATCCTATTTCGTGGAAGTGACATCAAGG
ATTTGCAGGTTAAGTCTTCACCTCCTGTTCAGGCTACACCACCTATAAACAATGACCCTG
CTATTATTCAGTCTCACTATCCTCGCCCAGCTACCACATCTGCAAGCTTGCCATCTACTG
TTAGTGGGCCTTTGCCAGATCTTAGTTCCCACAATGCACAGTTGGGACTTCCTGGGTCAA
CTTTTCAAGGTGGTCTGCCTCTATATCAACCTGGAGGGAATTTAGGATCCTGGGGCCCTG
CACCGCCTCCCCCTACCGCAAATGGCAGTGGCCTTACCATGCCTATGTATTGGCAAGGAT
ACTATGGTCCCCCAAATGGGCTTCCTCATTTACACCAACAATCTTTGCTTCGGCCCCCAC
CTGTTCTGTCAATGCCTCCAATGCAATATCCTGGTTTCAATGCCTCTTTACAGCCAGGAG
CTCCAAATTTGCCTGGTTCGAATCTACCGGAATATTCTTCTCCTTTGCTTCCAACCAGTA
GTGGTTCCCTTAATTTAACCTCTACTTCTTTATCACCATCTACTCTGCCTTCAAATCTGC
CTTCAAGTATGCCTTCAATTCTACCTTCAAGCATGCCTTCAATTCTGCCCTCAACTCTGC
CTTCTGCATTGCCTCCTGTACCATCTGCTGCTTTAGCTTCTGAAACCTTATCCAGTTTGA
TGCCAAATAAGGTTCCTAATCCTACTCTTCCTTCAGTAACACTAGGTATTAGCTTGCCAT
TAGTCACTCCTTTGAATACATCCAGTTCGGAGATAAATGCTATTGCACCACCAATTTCTA
ACAAGCCTAATGCAGTTTCTGGTCCAACATTGCCTTATCAAACCATATCTCAGTCCATTC
CCTCTGTTGGGACATCTAGTCCAAATCATCCAGAAATAGCAGCACCTTCACTGGTAACCC
CAGGTCAGTTGTTGCAGTCTGGACCAACCACAATTTCTTCATCTCCGTCTTCACAAACAG
CTCACAAGGATGTGGAGGTGGTTCAGGTATCATCATCAGCCTCACAAGAATCATCAGTTC
CGGTGTCAGCAGAAGCTCAACCACCGATATTACCTCTACCAGTACCTTCTCGAACTGTTC
AAAAGTTGAATGGTGCTCCTTTCCAAGGTCGTCATGGTTACCGGGGACGTGGAAGAGGAA
CAGGGGGCTCACGTCCAGTGACAAAATTCACTGAGGATTTTGATTTCATGGCAATGAATG
AGAAATTCAAGAAGGATGAAGTATGGGGTCATCTTGGTAAAGGTAATAAATCTCAGTCAA
GGGACAAAGAAGTTGATGGAAAAGTCAGCGATGAAGATGATTACGAAGATGAAGATGATG
CTGAATTACCAAAGTTTGAGGTCAAGCCCATCTATAATAAGGATGACTTCTTTGATTCCC
TCTCTTGTAATGCCCTTGACCATGATTCACATAATGGAAGGACTAGGTTCTCCGAACAAA
TGAAGATTGATACTGAGACTTTCGGTGATTTTCCTAGACATCGGGGTGGTCGAGGTGGGC
GTGGGCCCAATCGTGGAGGGCGTGGTCGGGGTCCTTATTATGGAAGGGGTTATGGCTATG
TTGGGAGGGGCCGTGGACGGGCTATGCCCAGTCGTGGTCCCTAAGTGGTGCTTGGTATCT
CTTAACGTTATACTACTAGGTAAAACCTATAGCCCAATTGCTCAGCAAAGCATCAAACTG
ATTTAGGACTATGCTTGTAATGTCTGTTTTTTTTTTTTTTTTTTTTCTTTTTCCTTTTCC
TCTCTGGGTTGTCTAGAAATAAGAGTATGATATGCTTTGTGGTTTTCTGACTTGGTTAAT
TTGTTGTCTTTGAATAACAATCCTTTCCTGGAGCTAATCAAGAAGCATTTGGTTTTGCGG
TTATGTTAG