Gene sequences

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Trait-Related Loci

Vitis vinifera

CDS Sequence

CDS ID	VIT_01s0011g02480.t01
CDS Infomation	cds chromosome:12X:1:2253605:2261314:-1 gene:VIT_01s0011g02480 gene_biotype:protein_coding transcript_biotype:protein_coding description:Phospholipid-transporting ATPase [Source:UniProtKB/TrEMBL;Acc:F6HFR1]
Sequence	ATGGCTGGCGGCCGGAGGGCGAAGCTGCATTTGAGCAAGATCTACACATACGCATGTGGG AAAACATCTTTGAAGGGTGATCATGAGCAGATTGGGCAACCCGGTTTTTCCAGGGTAGTT TTCTGCAACGAACCAGATCATTTTGAGGCCAAAATACGTAACTATGCAAACAATTATGTT AGGACTACAAAGTATACGCTAGCAAGTTTCTTGCCTAAATCCTTGTTTGAGCAGTTTAGG AGGGTTGCCAACTTTTTCTTCCTTGTAACCGGCATCTTGTCCTTCACTGATCTCGCCCCT TACTCTGCTGTCAGTGCCGTCCTCCCTCTAGTTATTGTGATTGCAGCCACCATGGTGAAA GAGGGTGTAGAGGATTGGCAGCGAAAACAACAGGATATTGAGGTGAACAATAGGAAAGTT AAAGTGCATGTTGGTGATGGAACTTTTCATGATACTGAATGGAGAAATCTTAGGGTTGGA GATGTAGTGAAGGTGGAGAAGGATCAATTTTTTCCAGCAGATATCCTCTTGCTCTCATCC AGTTATGACGATGCAATCTGCTATGTTGAAACCATGAGCCTCGATGGGGAGACGAATTTG AAAATGAAACAAGCTTTGGAGGCAACTTCATCCTTAAATGAAGATTCTAACTTCCAGAAT TTTAAGGCTGTCATTAAATGTGAAGACCCGAATGCCAATTTGTATACATTTGTTGGAACT ATGGAGTTGGAAGAGCAACATTGTCCCCTTAATCCACAACAACTTCTCCTTAGAGACTCA AAACTCCGGAATACTGATTACATATATGGGGCTGTCATCTTCACTGGTCATGATACAAAG GTCATTCAAAATTCAACTGATGCTCCCTCAAAGAGAAGCAGAGTTGAGAAGAAGATGGAT AAACTTATCTACTTCTTGTTTTTCGTCTTATTTCTGATATCTTTTGTTGGATCCATTATC TTTGGAATTATTACTAAGGACGACCTTAAGAATGGGAGGATGACAAGGTGGTATCTTAGA CCAGACGATACCACTATTTACTTTGACCCCAAAAGAGCACCGGTTGCAGCAATTCTTCAC TTCCTGACAGCTGTGATGTTGTATGCATACATGATCCCAATTTCATTGTATGTTTCAATT GAAATTGTCAAGGTTCTGCAAAGCATCTTCATCAATCAAGATGTTCATATGTACGACAAG GAGACTGATAAACCAGCACATGCCCGTACATCAAATTTGAACGAGGAACTTGGCCAAGTC GACACAATACTTTCTGATAAGACAGGGACTTTGACATGCAACTCAATGGAGTTCATCAAG TGTTCTGTGGCTGGAACAGCTTATGGCCGTGGTGTTACAGAGGTGGAGAGGGCTATGGCA AAAAGAAAAGGTTCACCATTGGCTCATGAATTGAATGGTTGGGATGAGGATGAAGATGCT CAAATTGGAAAACCACTCATTAAAGGCTACAATTTTAAAGACGAACGAATCATTCATGGA AATTGGGTTAATGAGCACAATGCAGACGTCATCCAGGGCTTTCTTCGTTTGTTGGCAATC TGTCATACTGCTATACCTGAAGTGAATGAAGTAACCGGGCAGGTTTCATATGAAGCCGAG TCACCAGATGAGGCAGCTTTTGTGATTGCAGCAAGAGAACTTGGTTTTGAGTTCTACAAA AGGACACAAACAAGCATCTCACTCCATGAGTTGGATCCTGTGTCTGGCAAGAAAGTTGAA AGGGTGTACGATCTCCTGAATGTTTTGGAGTTTAACAGCACAAGGAAGCGGATGTCCGTG ATTGTGAGAAATGAGGAGGGGAAATTATTATTACTTTGTAAAGGTGCTGATAGTGTCATG TTTGAGAGGCTTGACAAGAATGGTCGGCAGTTTGAAGAGGACACAAGAAACCATGTAAAT GAGTATGCTGATGCAGGCTTGAGGACTTTAATACTCGCTTATCGTGAACTTGATGAGGAA GAATATAAAGAGTTCAATAAGAAATTCAATGAGGCCAAGAGCTCGGTTAATGCAGACAGA GAAGCATTGATTGATGAAGTGACAGAGAAAATGGAGAAGAATTTGATTCTCCTAGGCGCA ACTGCTGTTGAGGACAAACTTCAACATGGGGTTCCTGACTGCATTGATAAGCTTGCCCAG GCAGGGATAAAGATATGGGTTTTGACAGGAGATAAGATGGAGACTGCCATCAATATTGGT TTTGCTTGTAGTTTGCTTCGACAAGGAATGAAGCAGATAATAATCAGTTTGGAGACACCT GACATTAAAGCTTTGGAAAAAGTGGGAGACAAGGCTGTTATCATAAAGGCATCAAAAGAA AGTGTCGTCCACCAGATAGCAGCAGGGAAAGCCCAGGTTACTGCATCTAGTGGAAGCTCT GAGGCATATGCTTTGATCATTGATGGGAAATCACTGGCATATGCACTACAAGATGATGTC AAAAACTTGTTCCTTGAGCTTGCAATTGGGTGTGCTTCCGTTATTTGCTGTCGTTCATCA CCAAAACAGAAGGCGCTGGTTACACGTCTGGTTAAACTTGGAACTGGGAAGACAACACTA GCAATTGGTGATGGCGCCAATGATGTGGGAATGCTTCAAGAAGCCGACATTGGGATTGGA ATCAGTGGTGTTGAAGGGATGCAGGCAGTCATGTCAAGTGATATTGCGATTGCTCAGTTC CAGTATTTGGAGCGTTTGCTACTAGTCCACGGACATTGGTGTTATAGAAGGATCTCATTA ATGATATGCTACTTCTTCTACAAGAACATCACATTTGCTTTTACTCTCTTCTTATATGAG GCACATGCGTCATTCTCTGGGCAACCTGCATACAATGATTGGTTTATGACGTTTTATAAT GTGTTCTTCACATCACTTCCACCAATTGCTTTGGGTGTTTTTGACCAAGATGTCTCAGCA CGGTTTTGTCTCAAGTTTCCTCTACTGTACCAAGAAGGAGTGCAGAATGTTCTTTTCAAC TGGCGTCGAATACTCAGCTGGATGTTCAATGGGGTATACAGTGCCATCATAATCTTCTTC TTCTGCATAAAGGCACTGGACTCCGAGGCCTTCAATAGCGGGGGGAAAACTGTTGGGAGG GAGATCCTTGGGACAACAATGTATACATGTGTTGTATGGGTTGTGAACTGTCAGATGGCC CTTACTATAAGTTACTTCACCTTGATACAACATATCTTCATCTGGGGAAGTATTGCTCTC TGGTATCTTTTCCTCCTAGTATTTGGAATCATGTCTCCCTCCATTTCTTCCACGGCTTAC AAACTTTTTATTGAAGCCCTTGCCCCAGCCCCCACCTTTTGGATTGTCACTCTCTTCGTG GTGATCTCAACCCTTATACCATTCTATGCTTACACAGCTATACAGATGCGGTTCTTTCCT ATGTACCATGGAATGATACAGTGGTTAAGGCATGAGGGGCAAACAGATGATCCAGAATAC TGCAACGTGGTGCGACAGAGGTCCTTGCGGCCACAGACTGTTGGTGTATCAGCACGTAGA GTGGCTAGAACTCATAGATAA

Peptide Sequence

PEP ID	VIT_01s0011g02480.t01
PEP Infomation	pep chromosome:12X:1:2253605:2261314:-1 gene:VIT_01s0011g02480 transcript:VIT_01s0011g02480.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Phospholipid-transporting ATPase [Source:UniProtKB/TrEMBL;Acc:F6HFR1]
Sequence	MAGGRRAKLHLSKIYTYACGKTSLKGDHEQIGQPGFSRVVFCNEPDHFEAKIRNYANNYV RTTKYTLASFLPKSLFEQFRRVANFFFLVTGILSFTDLAPYSAVSAVLPLVIVIAATMVK EGVEDWQRKQQDIEVNNRKVKVHVGDGTFHDTEWRNLRVGDVVKVEKDQFFPADILLLSS SYDDAICYVETMSLDGETNLKMKQALEATSSLNEDSNFQNFKAVIKCEDPNANLYTFVGT MELEEQHCPLNPQQLLLRDSKLRNTDYIYGAVIFTGHDTKVIQNSTDAPSKRSRVEKKMD KLIYFLFFVLFLISFVGSIIFGIITKDDLKNGRMTRWYLRPDDTTIYFDPKRAPVAAILH FLTAVMLYAYMIPISLYVSIEIVKVLQSIFINQDVHMYDKETDKPAHARTSNLNEELGQV DTILSDKTGTLTCNSMEFIKCSVAGTAYGRGVTEVERAMAKRKGSPLAHELNGWDEDEDA QIGKPLIKGYNFKDERIIHGNWVNEHNADVIQGFLRLLAICHTAIPEVNEVTGQVSYEAE SPDEAAFVIAARELGFEFYKRTQTSISLHELDPVSGKKVERVYDLLNVLEFNSTRKRMSV IVRNEEGKLLLLCKGADSVMFERLDKNGRQFEEDTRNHVNEYADAGLRTLILAYRELDEE EYKEFNKKFNEAKSSVNADREALIDEVTEKMEKNLILLGATAVEDKLQHGVPDCIDKLAQ AGIKIWVLTGDKMETAINIGFACSLLRQGMKQIIISLETPDIKALEKVGDKAVIIKASKE SVVHQIAAGKAQVTASSGSSEAYALIIDGKSLAYALQDDVKNLFLELAIGCASVICCRSS PKQKALVTRLVKLGTGKTTLAIGDGANDVGMLQEADIGIGISGVEGMQAVMSSDIAIAQF QYLERLLLVHGHWCYRRISLMICYFFYKNITFAFTLFLYEAHASFSGQPAYNDWFMTFYN VFFTSLPPIALGVFDQDVSARFCLKFPLLYQEGVQNVLFNWRRILSWMFNGVYSAIIIFF FCIKALDSEAFNSGGKTVGREILGTTMYTCVVWVVNCQMALTISYFTLIQHIFIWGSIAL WYLFLLVFGIMSPSISSTAYKLFIEALAPAPTFWIVTLFVVISTLIPFYAYTAIQMRFFP MYHGMIQWLRHEGQTDDPEYCNVVRQRSLRPQTVGVSARRVARTHR

Transcript Sequence

Transcript ID	VIT_01s0011g02480.t01
Transcript Infomation	cdna chromosome:12X:1:2253605:2261314:-1 gene:VIT_01s0011g02480 gene_biotype:protein_coding transcript_biotype:protein_coding description:Phospholipid-transporting ATPase [Source:UniProtKB/TrEMBL;Acc:F6HFR1]
Sequence	CTCTTACAGGAGCAAATTTGAGTTGTTTCCAGTGGTGTCTGTGTGTTGCGTTATTGGGGG TGGGTTGGAGTTGTTCTCATAGGAGGAAGAGACAATGGCTGGCGGCCGGAGGGCGAAGCT GCATTTGAGCAAGATCTACACATACGCATGTGGGAAAACATCTTTGAAGGGTGATCATGA GCAGATTGGGCAACCCGGTTTTTCCAGGGTAGTTTTCTGCAACGAACCAGATCATTTTGA GGCCAAAATACGTAACTATGCAAACAATTATGTTAGGACTACAAAGTATACGCTAGCAAG TTTCTTGCCTAAATCCTTGTTTGAGCAGTTTAGGAGGGTTGCCAACTTTTTCTTCCTTGT AACCGGCATCTTGTCCTTCACTGATCTCGCCCCTTACTCTGCTGTCAGTGCCGTCCTCCC TCTAGTTATTGTGATTGCAGCCACCATGGTGAAAGAGGGTGTAGAGGATTGGCAGCGAAA ACAACAGGATATTGAGGTGAACAATAGGAAAGTTAAAGTGCATGTTGGTGATGGAACTTT TCATGATACTGAATGGAGAAATCTTAGGGTTGGAGATGTAGTGAAGGTGGAGAAGGATCA ATTTTTTCCAGCAGATATCCTCTTGCTCTCATCCAGTTATGACGATGCAATCTGCTATGT TGAAACCATGAGCCTCGATGGGGAGACGAATTTGAAAATGAAACAAGCTTTGGAGGCAAC TTCATCCTTAAATGAAGATTCTAACTTCCAGAATTTTAAGGCTGTCATTAAATGTGAAGA CCCGAATGCCAATTTGTATACATTTGTTGGAACTATGGAGTTGGAAGAGCAACATTGTCC CCTTAATCCACAACAACTTCTCCTTAGAGACTCAAAACTCCGGAATACTGATTACATATA TGGGGCTGTCATCTTCACTGGTCATGATACAAAGGTCATTCAAAATTCAACTGATGCTCC CTCAAAGAGAAGCAGAGTTGAGAAGAAGATGGATAAACTTATCTACTTCTTGTTTTTCGT CTTATTTCTGATATCTTTTGTTGGATCCATTATCTTTGGAATTATTACTAAGGACGACCT TAAGAATGGGAGGATGACAAGGTGGTATCTTAGACCAGACGATACCACTATTTACTTTGA CCCCAAAAGAGCACCGGTTGCAGCAATTCTTCACTTCCTGACAGCTGTGATGTTGTATGC ATACATGATCCCAATTTCATTGTATGTTTCAATTGAAATTGTCAAGGTTCTGCAAAGCAT CTTCATCAATCAAGATGTTCATATGTACGACAAGGAGACTGATAAACCAGCACATGCCCG TACATCAAATTTGAACGAGGAACTTGGCCAAGTCGACACAATACTTTCTGATAAGACAGG GACTTTGACATGCAACTCAATGGAGTTCATCAAGTGTTCTGTGGCTGGAACAGCTTATGG CCGTGGTGTTACAGAGGTGGAGAGGGCTATGGCAAAAAGAAAAGGTTCACCATTGGCTCA TGAATTGAATGGTTGGGATGAGGATGAAGATGCTCAAATTGGAAAACCACTCATTAAAGG CTACAATTTTAAAGACGAACGAATCATTCATGGAAATTGGGTTAATGAGCACAATGCAGA CGTCATCCAGGGCTTTCTTCGTTTGTTGGCAATCTGTCATACTGCTATACCTGAAGTGAA TGAAGTAACCGGGCAGGTTTCATATGAAGCCGAGTCACCAGATGAGGCAGCTTTTGTGAT TGCAGCAAGAGAACTTGGTTTTGAGTTCTACAAAAGGACACAAACAAGCATCTCACTCCA TGAGTTGGATCCTGTGTCTGGCAAGAAAGTTGAAAGGGTGTACGATCTCCTGAATGTTTT GGAGTTTAACAGCACAAGGAAGCGGATGTCCGTGATTGTGAGAAATGAGGAGGGGAAATT ATTATTACTTTGTAAAGGTGCTGATAGTGTCATGTTTGAGAGGCTTGACAAGAATGGTCG GCAGTTTGAAGAGGACACAAGAAACCATGTAAATGAGTATGCTGATGCAGGCTTGAGGAC TTTAATACTCGCTTATCGTGAACTTGATGAGGAAGAATATAAAGAGTTCAATAAGAAATT CAATGAGGCCAAGAGCTCGGTTAATGCAGACAGAGAAGCATTGATTGATGAAGTGACAGA GAAAATGGAGAAGAATTTGATTCTCCTAGGCGCAACTGCTGTTGAGGACAAACTTCAACA TGGGGTTCCTGACTGCATTGATAAGCTTGCCCAGGCAGGGATAAAGATATGGGTTTTGAC AGGAGATAAGATGGAGACTGCCATCAATATTGGTTTTGCTTGTAGTTTGCTTCGACAAGG AATGAAGCAGATAATAATCAGTTTGGAGACACCTGACATTAAAGCTTTGGAAAAAGTGGG AGACAAGGCTGTTATCATAAAGGCATCAAAAGAAAGTGTCGTCCACCAGATAGCAGCAGG GAAAGCCCAGGTTACTGCATCTAGTGGAAGCTCTGAGGCATATGCTTTGATCATTGATGG GAAATCACTGGCATATGCACTACAAGATGATGTCAAAAACTTGTTCCTTGAGCTTGCAAT TGGGTGTGCTTCCGTTATTTGCTGTCGTTCATCACCAAAACAGAAGGCGCTGGTTACACG TCTGGTTAAACTTGGAACTGGGAAGACAACACTAGCAATTGGTGATGGCGCCAATGATGT GGGAATGCTTCAAGAAGCCGACATTGGGATTGGAATCAGTGGTGTTGAAGGGATGCAGGC AGTCATGTCAAGTGATATTGCGATTGCTCAGTTCCAGTATTTGGAGCGTTTGCTACTAGT CCACGGACATTGGTGTTATAGAAGGATCTCATTAATGATATGCTACTTCTTCTACAAGAA CATCACATTTGCTTTTACTCTCTTCTTATATGAGGCACATGCGTCATTCTCTGGGCAACC TGCATACAATGATTGGTTTATGACGTTTTATAATGTGTTCTTCACATCACTTCCACCAAT TGCTTTGGGTGTTTTTGACCAAGATGTCTCAGCACGGTTTTGTCTCAAGTTTCCTCTACT GTACCAAGAAGGAGTGCAGAATGTTCTTTTCAACTGGCGTCGAATACTCAGCTGGATGTT CAATGGGGTATACAGTGCCATCATAATCTTCTTCTTCTGCATAAAGGCACTGGACTCCGA GGCCTTCAATAGCGGGGGGAAAACTGTTGGGAGGGAGATCCTTGGGACAACAATGTATAC ATGTGTTGTATGGGTTGTGAACTGTCAGATGGCCCTTACTATAAGTTACTTCACCTTGAT ACAACATATCTTCATCTGGGGAAGTATTGCTCTCTGGTATCTTTTCCTCCTAGTATTTGG AATCATGTCTCCCTCCATTTCTTCCACGGCTTACAAACTTTTTATTGAAGCCCTTGCCCC AGCCCCCACCTTTTGGATTGTCACTCTCTTCGTGGTGATCTCAACCCTTATACCATTCTA TGCTTACACAGCTATACAGATGCGGTTCTTTCCTATGTACCATGGAATGATACAGTGGTT AAGGCATGAGGGGCAAACAGATGATCCAGAATACTGCAACGTGGTGCGACAGAGGTCCTT GCGGCCACAGACTGTTGGTGTATCAGCACGTAGAGTGGCTAGAACTCATAGATAAACAGA AGAATGATAGTCATAGATAGATACTTGCAGTTGAACTCTTAGAGGAGGCTATCAAAGGAT TTGAGCTGTAGATATCTGCTGAGAAGCCAGGAACTCTGCCCATTGAATATGGTGAAATTT GAATTATGTGGCCATTTATTAGCTCAATTCAACTAGAAATCATGTCGAAGGGATTATTAC AGCAAGAGGTAGTGTACAGAAGTATAACCAACCTGTACCATATGTTCGATAGAAAAAAAG AAAAAAAAGGGCCCAAAAGCTGTAAATTTTGATTTTTGGCCGTCACAGGCCATACACATT TATTCTTGTAATCATATATCTTGTAATATTTCTATAATGCAATAGTGAACAGA