Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_01s0011g02460.t01
CDS Infomation

cds chromosome:12X:1:2242232:2247259:1 gene:VIT_01s0011g02460 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCCACGGCGTCGCCGCCTCCTAATTCTTCTCCTTCCGCGGTTCCTCCGACCTCTGCC
GCCACTCCACCACCGCCCTTGTCTTCTCCTCCTCCTCCTCCGGAGTCTTCTACTCCTCCA
TCTTCCCAGCCCAATGCAGATCCACCGGATGGTGCAGCAGGTTCTACTTCATCCCCACCA
CCTCAATCACCTCCTGCTGTTCCAGCAGCGCCACCTCCAGCATCACCACCACCACCACCA
CCAACTCCTTCCCTAGCCAATTCTCCTTCGTCGCCTCCACCTCCTTCTCCTCCACCCCCT
TCTCCCAATGCTCCTCCACCGACTCCTCCGCCATCTCCACCCATTGCTCCAGTTCCGCCT
CCCTCCAATCCCTCACCTCCGCCATTAACACCACCACCAACTTCACCTCCACCGCCACCA
CCACCGACCAATCCGCCCAGGAGTCCGCCTCCCCCACCACCTACAGAACCACCAGTGACT
TCACCTCCTCCACCATCTTCAAACCCCCCTAAAAGTTCACCACCACCATCAGAACCACCA
AAAACCTCACCCCCACCACCATCTAAACCACCCCCTGTTTCACCACCATCACCATCACCA
TCAAGTCCACCTGAGGATTCACCTCCACCACCTGTACCTGTGCCACCCAGTAATTCAACC
CCTCCCGCCCCGTCTCCATCTGGTTCTCAACCAGCAACTCCACCCTCTCCAAATTCTCCT
CCAAAAGGATCGCCACCACCACCCAGGACACCAACTCCACCTCCTCCTGCACGTTCCCCA
CCACCTCTTTCTCCCCCTTCATCTCCTCAAACTCCAAACTCGCCATCAGATAGCCCATCT
GTGAACAATTCTACCCCCAATGGAAGTCCAAATTCTACAAGTAAAGGAGGCATTGGTACT
GTAGGTACAGTGGCTATTGGATTGGTACTGGGTTTAGTAGTACTTGTTCTCATTGGAGTG
GCTTTCTTGTGCCTGCGGAAGCGGAAGAAAAAGGTATCTGGACTTAATGGTGGCTATGTT
ATGCCAGCCACACTGGGTTCTTCTCCGAGATCAGATTCATCTTTTACAAAGACACTGTCT
TCAGCTCCCCTCATAGGAAGTGGTTCGGGTAGCGACTTTGTATACTCACCATCTGAGCCA
GGAGGATTAGGCAATTCAAGATCATGGTTTACATATGAAGAACTAGTCAAGGCAACAAAT
GGATTTTCAACTCAAAATCTTCTGGGCGAAGGTGGATTTGGTTCTGTATATAAAGGATAC
CTGCCAGACGGGAGAGAGATAGCAGTAAAGCAGCTAAAGATTGGTGGGGCCCAGGGAGAG
CGAGAATTTAAAGCTGAAGTTGAGATTATTAGTCGGATACACCATCGCCATTTGGTCTCA
CTTGTGGGTTACTGCATTTCTGAGAGCCAAAGGCTGCTCGTCTATGACTATGTTCCTAAC
AATACCCTTTATTTCCATCTTCATGGGGAAGGTAGGCCAGTTATGGACTGGGCAACACGT
GTTAAGGTTGCTGCTGGTGCAGCTCGTGGAATAGCTTATCTTCATGAAGACTGCCATCCT
CGGGTTATTCACAGGGATATTAAGTCTTCAAATATTCTTTTAAATTATAACTTTGAAGCT
CAGGTTTCAGATTTTGGACTTGCTAAATTAGCTCTAGATGCTGATACTCACGTAACAACA
CGTGTAATGGGGACTTTTGGATATATGGCTCCCGAGTATGCATCAAGTGGCAAGTTAACT
GAGAAATCTGATGTCTTCTCTTTTGGAGTTGTCCTTCTGGAGCTTATTACTGGACGGAAA
CCTGTGGATGCATCTCAACCCGTGGGTGATGAGAGTCTAGTTGAATGGGCTCGACCTTTG
CTTAGTCATGCCCTTGAGAATGAGGAGTTCGAAGGTTTGACAGATCCAAGGCTTGAGAAA
AACTATGTAGAAAGTGAAATGTTTCGTATGCTAGAGGCTGCTGCAGCTTGTGTCCGTCAT
TCAGCTGCAAAGAGACCACGAATGGGACAGGTTGTTAGAGCTTTTGATAGTATGGGTACC
TCGGATCTGTCCAATGGAATGAGGGTGGGTGAAAGTGAAGTATTTAATTCTGCACAACAA
TCTGAAGAAATTAGATGGTTTCAGAGGATGGCATTTGGTAGTCAAGACTACAGTACAGAC
TTTTTTAGCCAAGGTGGCTAG

Peptide Sequence

PEP ID

VIT_01s0011g02460.t01
PEP Infomation

pep chromosome:12X:1:2242232:2247259:1 gene:VIT_01s0011g02460 transcript:VIT_01s0011g02460.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MATASPPPNSSPSAVPPTSAATPPPPLSSPPPPPESSTPPSSQPNADPPDGAAGSTSSPP
PQSPPAVPAAPPPASPPPPPPTPSLANSPSSPPPPSPPPPSPNAPPPTPPPSPPIAPVPP
PSNPSPPPLTPPPTSPPPPPPPTNPPRSPPPPPPTEPPVTSPPPPSSNPPKSSPPPSEPP
KTSPPPPSKPPPVSPPSPSPSSPPEDSPPPPVPVPPSNSTPPAPSPSGSQPATPPSPNSP
PKGSPPPPRTPTPPPPARSPPPLSPPSSPQTPNSPSDSPSVNNSTPNGSPNSTSKGGIGT
VGTVAIGLVLGLVVLVLIGVAFLCLRKRKKKVSGLNGGYVMPATLGSSPRSDSSFTKTLS
SAPLIGSGSGSDFVYSPSEPGGLGNSRSWFTYEELVKATNGFSTQNLLGEGGFGSVYKGY
LPDGREIAVKQLKIGGAQGEREFKAEVEIISRIHHRHLVSLVGYCISESQRLLVYDYVPN
NTLYFHLHGEGRPVMDWATRVKVAAGAARGIAYLHEDCHPRVIHRDIKSSNILLNYNFEA
QVSDFGLAKLALDADTHVTTRVMGTFGYMAPEYASSGKLTEKSDVFSFGVVLLELITGRK
PVDASQPVGDESLVEWARPLLSHALENEEFEGLTDPRLEKNYVESEMFRMLEAAAACVRH
SAAKRPRMGQVVRAFDSMGTSDLSNGMRVGESEVFNSAQQSEEIRWFQRMAFGSQDYSTD
FFSQGG

Transcript Sequence

Transcript ID

VIT_01s0011g02460.t01
Transcript Infomation

cdna chromosome:12X:1:2242232:2247259:1 gene:VIT_01s0011g02460 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCCACGGCGTCGCCGCCTCCTAATTCTTCTCCTTCCGCGGTTCCTCCGACCTCTGCC
GCCACTCCACCACCGCCCTTGTCTTCTCCTCCTCCTCCTCCGGAGTCTTCTACTCCTCCA
TCTTCCCAGCCCAATGCAGATCCACCGGATGGTGCAGCAGGTTCTACTTCATCCCCACCA
CCTCAATCACCTCCTGCTGTTCCAGCAGCGCCACCTCCAGCATCACCACCACCACCACCA
CCAACTCCTTCCCTAGCCAATTCTCCTTCGTCGCCTCCACCTCCTTCTCCTCCACCCCCT
TCTCCCAATGCTCCTCCACCGACTCCTCCGCCATCTCCACCCATTGCTCCAGTTCCGCCT
CCCTCCAATCCCTCACCTCCGCCATTAACACCACCACCAACTTCACCTCCACCGCCACCA
CCACCGACCAATCCGCCCAGGAGTCCGCCTCCCCCACCACCTACAGAACCACCAGTGACT
TCACCTCCTCCACCATCTTCAAACCCCCCTAAAAGTTCACCACCACCATCAGAACCACCA
AAAACCTCACCCCCACCACCATCTAAACCACCCCCTGTTTCACCACCATCACCATCACCA
TCAAGTCCACCTGAGGATTCACCTCCACCACCTGTACCTGTGCCACCCAGTAATTCAACC
CCTCCCGCCCCGTCTCCATCTGGTTCTCAACCAGCAACTCCACCCTCTCCAAATTCTCCT
CCAAAAGGATCGCCACCACCACCCAGGACACCAACTCCACCTCCTCCTGCACGTTCCCCA
CCACCTCTTTCTCCCCCTTCATCTCCTCAAACTCCAAACTCGCCATCAGATAGCCCATCT
GTGAACAATTCTACCCCCAATGGAAGTCCAAATTCTACAAGTAAAGGAGGCATTGGTACT
GTAGGTACAGTGGCTATTGGATTGGTACTGGGTTTAGTAGTACTTGTTCTCATTGGAGTG
GCTTTCTTGTGCCTGCGGAAGCGGAAGAAAAAGGTATCTGGACTTAATGGTGGCTATGTT
ATGCCAGCCACACTGGGTTCTTCTCCGAGATCAGATTCATCTTTTACAAAGACACTGTCT
TCAGCTCCCCTCATAGGAAGTGGTTCGGGTAGCGACTTTGTATACTCACCATCTGAGCCA
GGAGGATTAGGCAATTCAAGATCATGGTTTACATATGAAGAACTAGTCAAGGCAACAAAT
GGATTTTCAACTCAAAATCTTCTGGGCGAAGGTGGATTTGGTTCTGTATATAAAGGATAC
CTGCCAGACGGGAGAGAGATAGCAGTAAAGCAGCTAAAGATTGGTGGGGCCCAGGGAGAG
CGAGAATTTAAAGCTGAAGTTGAGATTATTAGTCGGATACACCATCGCCATTTGGTCTCA
CTTGTGGGTTACTGCATTTCTGAGAGCCAAAGGCTGCTCGTCTATGACTATGTTCCTAAC
AATACCCTTTATTTCCATCTTCATGGGGAAGGTAGGCCAGTTATGGACTGGGCAACACGT
GTTAAGGTTGCTGCTGGTGCAGCTCGTGGAATAGCTTATCTTCATGAAGACTGCCATCCT
CGGGTTATTCACAGGGATATTAAGTCTTCAAATATTCTTTTAAATTATAACTTTGAAGCT
CAGGTTTCAGATTTTGGACTTGCTAAATTAGCTCTAGATGCTGATACTCACGTAACAACA
CGTGTAATGGGGACTTTTGGATATATGGCTCCCGAGTATGCATCAAGTGGCAAGTTAACT
GAGAAATCTGATGTCTTCTCTTTTGGAGTTGTCCTTCTGGAGCTTATTACTGGACGGAAA
CCTGTGGATGCATCTCAACCCGTGGGTGATGAGAGTCTAGTTGAATGGGCTCGACCTTTG
CTTAGTCATGCCCTTGAGAATGAGGAGTTCGAAGGTTTGACAGATCCAAGGCTTGAGAAA
AACTATGTAGAAAGTGAAATGTTTCGTATGCTAGAGGCTGCTGCAGCTTGTGTCCGTCAT
TCAGCTGCAAAGAGACCACGAATGGGACAGGTTGTTAGAGCTTTTGATAGTATGGGTACC
TCGGATCTGTCCAATGGAATGAGGGTGGGTGAAAGTGAAGTATTTAATTCTGCACAACAA
TCTGAAGAAATTAGATGGTTTCAGAGGATGGCATTTGGTAGTCAAGACTACAGTACAGAC
TTTTTTAGCCAAGGTGGCTAGAATAGTTAAGTAACATGGCAAATATTGGGAGAGATGAAT
GCATATTGAACCAGGAAGTTCTGCAGAGGCAAGCCAGGGTCCTGTTGATGTTGATGTGAA
CGTGGAGCGATGACTTAGGTAGTGGTACAAATTTGGCTCAGATCCAGAACCTGACCGAGC
AGGTATAGAGACCAGAATTTACACCCTCAGCTCAGCTTAGATCCTGTAAATGGTTTCATT
CATCTTCTATAATCTATACATTCTTTCTTTTTGTAAGTAACACGGCCAGTTTTTTGTTTC
CACCGAAATCTGGGTGTTGTTAATAAAATGCCAATTTTCCGGTGCCATTAATAAAATGCC
AATTCAATTTTGTTC