Plant GARDEN
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_01s0011g02280.t01
CDS Infomation

cds chromosome:12X:1:2042107:2062423:-1 gene:VIT_01s0011g02280 gene_biotype:protein_coding transcript_biotype:protein_coding description:Alanine--tRNA ligase [Source:UniProtKB/TrEMBL;Acc:F6HF38]
Sequence

ATGAGGAGGGCTTTGTGTGGAGGTTTTGCGGGACGCTCCTCTACTGCTTCTGTGGCGGCT
GCTTTCGTCCACTCGCCTCCGCTTCCTCCGCCGATTAGGGTTTCGTTTTTCACTTATTCT
TCTGAAGCAGCAGTCATCGGCATGGCGCAGAAGGCGGTGTCGGAAGTGGAGTGGCCGGCG
AACAAAGTCAGGGACACGTTTATCAATTTCTTTGAGTCCAAAAACCACGTCGATTGGAAA
TCTAGCCCTGTTGTTCCCGTCAATGATCCCACTCTTCTCTTTGCCAATGCTGGTATGAAC
CAGTTTAAGCCAATCTTTTTAGGGACTGCTGATCCAAACACTGCCTTGAGTAAACTAACT
CGTGCTTGCAACACCCAAAAGTGTATCCGAGCTGGTGGGAAACACAATGATCTTGATGAC
GTGGGAAAAGATACTTACCACCACACATTCTTTGAGATGCTTGGTAATTGGTCATTTGGG
GATTACTTCAAAAAGGAAGCTATTGAATGGGCTTGGGAGCTTCTCACCAAGGCAAAAAAT
CTGGTGTATAAACTACCTACTGATCGTATTTATGCCACTTATTTTGGTGGTGATGAGAAA
TCTGGTCTATCTCCTGATACTGAAGCTAGGGATATGTGGCTCAAGTTTTTGCCACCTGGA
CATGTATTGCCCTTTGGTTGTAAAGACAACTTCTGGGAGATGGGTGATACTGGTCCTTGT
GGGCCTTGCACTGAAATACATTTTGATAGAATTGGTAATCGTGATGCTGCATCATTGGTT
AACAATGATGACCCTACGTGTATTGAGATATGGAACCTCGTGTTTATACAGTTCAACAGG
GAAAGCGATGGTTCTCTTAAATCTCTGCCTGCTAAACATGTTGACACTGGAATGGGCTTT
GAAAGATTGACTTCTATTCTTCAGGGCAAGATGAGCAATTATGATACTGATGTGTTCTTA
CCCATCTTTGATGCTATTCAACAGGCGACTGGTGCTCGACCATATTCAGGGAAAGTTGGA
TCAGATGATGCAGACAAAGTTGACATGGCATACAGGGTTGTTGCTGATCACATAAGAACA
CTTTCTTTTGCTATTGCTGATGGTTCTTGTCCAGGCAATGAGGGCCGTGAATACGTTCTG
AGGCGTATTCTCCGTAGAGCTGTTCGTTATGGAAGTGAAGTTCTGAAAGCACAAGAAGGA
TTCTTCAATAGCTTCGTAAACATTGTTGTAAAGGTGATGGGTGATGTTTTCCCTGAACTG
AAACAACGTGAAGTGCACATCAGGGAAATAATTGCTGAAGAGGAAGCAAGTTTTGGCAAG
ACATTACTTAAGGGAATCGAGAAATTTAAGAAGGCTGCTCAGGAAGTTCAGGGGAAGATA
TTGAATGGACAGGATGCATTTGTATTGTGGGACACATATGGCTTTCCTTTGGACCTGACT
CAGTTGATGGCAGAGGAAAGAGGCTTAATTGTTGATGTTCAGGGTTTCAATGCTGCCCTG
GATGAGGCAAGGGAAAGATCAAGAAGCGCTCAGAATAAGCAAGCTGGTGGCACTATTGTC
ATGGATGCTGATGCTACCTCAGCTTTGCACAAGCGGGGAGTTGCTCCAACAGATGATTCC
TTCAAGTTCACATGGTTCCAGGATCATGGAAGTGTAATCAAAGCTATTTACTCCGGATCT
GAGTTCTTGGAAAGTGCTTCTGCTGGGAATGAAGTTGGAATTGTTCTAGAAACAACAAGT
TTTTATGCTGAACAAGGTGGTCAGATTTTTGATACCGGGTCACTTGAGGGAACCTCCGGG
TCATTTCAAGTTTGTAATGTTCAAATTTATGGTGGCTTCATTCTTCATATTGGTTCCTTC
ACTGAAGCATCTGGCAGATTCTCTGTAGGTGATAAAGTAATATGTAAGGTTGACTATGAC
AGGCGTAAAGTCATTGCTCCTAACCATACCTGTACACATATGTTGAACTTTGCTCTTAGG
GAAGTACTTGGCAATCATGTTGATCAGAAGGGATCCATTGTTCTTCCTGAGAAGTTACGA
TTTGATTTTTCTCATGGCAAGCCCGTTCATCCTGATCATTTAAGAAAGATTGAGTCAATT
GTGAATGAGCAAATCGATGCTGAGTTAGATGTATTTTCAAAGGATGCAAGCCTTGCTGAT
GCCAAGAGTATAAATGGCTTACGAGCTGTTTTTGGAGAAGTTTATCCAGACCCAGTTAGG
GTTGTGTCAATTGGTCAAAAAGTGGAGGATCTCTTGGCTGATCCAGGAAATGAAAAATGG
TTATCAATTTCTGCAGAACTTTGTGGAGGTACCCATATATCAAATACCCGAGAGGCTAAG
GCATTTGCTCTTTTATCTGAGGAAGGAATCGCCAAGGGAATCCGAAGGATTACTGCTGTT
ACAACTGATGTTGCTTTTAAGGCAATAGAGTTGGCACGCTCGCTTGAACAGGAAGTGGAT
GATGCATCTAAGACGGAAGGGATCTCGTTGGAAAAGAAAGTTGCTTCTTTAAGAAGTCGT
GTTGACTCTGCGCCTATTCCAGCAGCCAGGAAAGCTGATCTCAGGGCCAAGATTTCCCTA
CTTCAGGATCAAGTCAGGAAGGCACAAAAGAAGTTCGCTGAAGAAAATATACAGAAAGCT
GTCAAGGCTGCAACTGATATGGCCCAGCTTGCTGCTTCAGATGGAAAAACATTCTGCATC
TCTCATGTGGATGTTGGTTTAGATACAACTGCAGTGCGTGAAGCAGTCCTAAAAGTCATA
GAGCAAAAGGGAATATCGGTGATGATTTTCAGTACAGATGAAACCACTAACAAGGCGGTA
GTGTATGCTGGAGTGCCACAGAAGGGAGATAAAGCAAAGCAGTTAGAGGTGTCAGAATGG
TTGACAGCAGCTTTAGGGCCTCTAAAAGGGCGATGTGGTAAAGGAAAAGGCGGTCTTGCT
CAAGGCCAGGGTACAGATGCATCGCATGTGAAGGAGGCCATGGATGTGGCAGAAAATTTT
GCATCAATGAAATTGAGATGA

Peptide Sequence

PEP ID

VIT_01s0011g02280.t01
PEP Infomation

pep chromosome:12X:1:2042107:2062423:-1 gene:VIT_01s0011g02280 transcript:VIT_01s0011g02280.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Alanine--tRNA ligase [Source:UniProtKB/TrEMBL;Acc:F6HF38]
Sequence

MRRALCGGFAGRSSTASVAAAFVHSPPLPPPIRVSFFTYSSEAAVIGMAQKAVSEVEWPA
NKVRDTFINFFESKNHVDWKSSPVVPVNDPTLLFANAGMNQFKPIFLGTADPNTALSKLT
RACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKKEAIEWAWELLTKAKN
LVYKLPTDRIYATYFGGDEKSGLSPDTEARDMWLKFLPPGHVLPFGCKDNFWEMGDTGPC
GPCTEIHFDRIGNRDAASLVNNDDPTCIEIWNLVFIQFNRESDGSLKSLPAKHVDTGMGF
ERLTSILQGKMSNYDTDVFLPIFDAIQQATGARPYSGKVGSDDADKVDMAYRVVADHIRT
LSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQEGFFNSFVNIVVKVMGDVFPEL
KQREVHIREIIAEEEASFGKTLLKGIEKFKKAAQEVQGKILNGQDAFVLWDTYGFPLDLT
QLMAEERGLIVDVQGFNAALDEARERSRSAQNKQAGGTIVMDADATSALHKRGVAPTDDS
FKFTWFQDHGSVIKAIYSGSEFLESASAGNEVGIVLETTSFYAEQGGQIFDTGSLEGTSG
SFQVCNVQIYGGFILHIGSFTEASGRFSVGDKVICKVDYDRRKVIAPNHTCTHMLNFALR
EVLGNHVDQKGSIVLPEKLRFDFSHGKPVHPDHLRKIESIVNEQIDAELDVFSKDASLAD
AKSINGLRAVFGEVYPDPVRVVSIGQKVEDLLADPGNEKWLSISAELCGGTHISNTREAK
AFALLSEEGIAKGIRRITAVTTDVAFKAIELARSLEQEVDDASKTEGISLEKKVASLRSR
VDSAPIPAARKADLRAKISLLQDQVRKAQKKFAEENIQKAVKAATDMAQLAASDGKTFCI
SHVDVGLDTTAVREAVLKVIEQKGISVMIFSTDETTNKAVVYAGVPQKGDKAKQLEVSEW
LTAALGPLKGRCGKGKGGLAQGQGTDASHVKEAMDVAENFASMKLR

Transcript Sequence

Transcript ID

VIT_01s0011g02280.t01
Transcript Infomation

cdna chromosome:12X:1:2042107:2062423:-1 gene:VIT_01s0011g02280 gene_biotype:protein_coding transcript_biotype:protein_coding description:Alanine--tRNA ligase [Source:UniProtKB/TrEMBL;Acc:F6HF38]
Sequence

GATGAGGAGGGCTTTGTGTGGAGGTTTTGCGGGACGCTCCTCTACTGCTTCTGTGGCGGC
TGCTTTCGTCCACTCGCCTCCGCTTCCTCCGCCGATTAGGGTTTCGTTTTTCACTTATTC
TTCTGAAGCAGCAGTCATCGGCATGGCGCAGAAGGCGGTGTCGGAAGTGGAGTGGCCGGC
GAACAAAGTCAGGGACACGTTTATCAATTTCTTTGAGTCCAAAAACCACGTCGATTGGAA
ATCTAGCCCTGTTGTTCCCGTCAATGATCCCACTCTTCTCTTTGCCAATGCTGGTATGAA
CCAGTTTAAGCCAATCTTTTTAGGGACTGCTGATCCAAACACTGCCTTGAGTAAACTAAC
TCGTGCTTGCAACACCCAAAAGTGTATCCGAGCTGGTGGGAAACACAATGATCTTGATGA
CGTGGGAAAAGATACTTACCACCACACATTCTTTGAGATGCTTGGTAATTGGTCATTTGG
GGATTACTTCAAAAAGGAAGCTATTGAATGGGCTTGGGAGCTTCTCACCAAGGCAAAAAA
TCTGGTGTATAAACTACCTACTGATCGTATTTATGCCACTTATTTTGGTGGTGATGAGAA
ATCTGGTCTATCTCCTGATACTGAAGCTAGGGATATGTGGCTCAAGTTTTTGCCACCTGG
ACATGTATTGCCCTTTGGTTGTAAAGACAACTTCTGGGAGATGGGTGATACTGGTCCTTG
TGGGCCTTGCACTGAAATACATTTTGATAGAATTGGTAATCGTGATGCTGCATCATTGGT
TAACAATGATGACCCTACGTGTATTGAGATATGGAACCTCGTGTTTATACAGTTCAACAG
GGAAAGCGATGGTTCTCTTAAATCTCTGCCTGCTAAACATGTTGACACTGGAATGGGCTT
TGAAAGATTGACTTCTATTCTTCAGGGCAAGATGAGCAATTATGATACTGATGTGTTCTT
ACCCATCTTTGATGCTATTCAACAGGCGACTGGTGCTCGACCATATTCAGGGAAAGTTGG
ATCAGATGATGCAGACAAAGTTGACATGGCATACAGGGTTGTTGCTGATCACATAAGAAC
ACTTTCTTTTGCTATTGCTGATGGTTCTTGTCCAGGCAATGAGGGCCGTGAATACGTTCT
GAGGCGTATTCTCCGTAGAGCTGTTCGTTATGGAAGTGAAGTTCTGAAAGCACAAGAAGG
ATTCTTCAATAGCTTCGTAAACATTGTTGTAAAGGTGATGGGTGATGTTTTCCCTGAACT
GAAACAACGTGAAGTGCACATCAGGGAAATAATTGCTGAAGAGGAAGCAAGTTTTGGCAA
GACATTACTTAAGGGAATCGAGAAATTTAAGAAGGCTGCTCAGGAAGTTCAGGGGAAGAT
ATTGAATGGACAGGATGCATTTGTATTGTGGGACACATATGGCTTTCCTTTGGACCTGAC
TCAGTTGATGGCAGAGGAAAGAGGCTTAATTGTTGATGTTCAGGGTTTCAATGCTGCCCT
GGATGAGGCAAGGGAAAGATCAAGAAGCGCTCAGAATAAGCAAGCTGGTGGCACTATTGT
CATGGATGCTGATGCTACCTCAGCTTTGCACAAGCGGGGAGTTGCTCCAACAGATGATTC
CTTCAAGTTCACATGGTTCCAGGATCATGGAAGTGTAATCAAAGCTATTTACTCCGGATC
TGAGTTCTTGGAAAGTGCTTCTGCTGGGAATGAAGTTGGAATTGTTCTAGAAACAACAAG
TTTTTATGCTGAACAAGGTGGTCAGATTTTTGATACCGGGTCACTTGAGGGAACCTCCGG
GTCATTTCAAGTTTGTAATGTTCAAATTTATGGTGGCTTCATTCTTCATATTGGTTCCTT
CACTGAAGCATCTGGCAGATTCTCTGTAGGTGATAAAGTAATATGTAAGGTTGACTATGA
CAGGCGTAAAGTCATTGCTCCTAACCATACCTGTACACATATGTTGAACTTTGCTCTTAG
GGAAGTACTTGGCAATCATGTTGATCAGAAGGGATCCATTGTTCTTCCTGAGAAGTTACG
ATTTGATTTTTCTCATGGCAAGCCCGTTCATCCTGATCATTTAAGAAAGATTGAGTCAAT
TGTGAATGAGCAAATCGATGCTGAGTTAGATGTATTTTCAAAGGATGCAAGCCTTGCTGA
TGCCAAGAGTATAAATGGCTTACGAGCTGTTTTTGGAGAAGTTTATCCAGACCCAGTTAG
GGTTGTGTCAATTGGTCAAAAAGTGGAGGATCTCTTGGCTGATCCAGGAAATGAAAAATG
GTTATCAATTTCTGCAGAACTTTGTGGAGGTACCCATATATCAAATACCCGAGAGGCTAA
GGCATTTGCTCTTTTATCTGAGGAAGGAATCGCCAAGGGAATCCGAAGGATTACTGCTGT
TACAACTGATGTTGCTTTTAAGGCAATAGAGTTGGCACGCTCGCTTGAACAGGAAGTGGA
TGATGCATCTAAGACGGAAGGGATCTCGTTGGAAAAGAAAGTTGCTTCTTTAAGAAGTCG
TGTTGACTCTGCGCCTATTCCAGCAGCCAGGAAAGCTGATCTCAGGGCCAAGATTTCCCT
ACTTCAGGATCAAGTCAGGAAGGCACAAAAGAAGTTCGCTGAAGAAAATATACAGAAAGC
TGTCAAGGCTGCAACTGATATGGCCCAGCTTGCTGCTTCAGATGGAAAAACATTCTGCAT
CTCTCATGTGGATGTTGGTTTAGATACAACTGCAGTGCGTGAAGCAGTCCTAAAAGTCAT
AGAGCAAAAGGGAATATCGGTGATGATTTTCAGTACAGATGAAACCACTAACAAGGCGGT
AGTGTATGCTGGAGTGCCACAGAAGGGAGATAAAGCAAAGCAGTTAGAGGTGTCAGAATG
GTTGACAGCAGCTTTAGGGCCTCTAAAAGGGCGATGTGGTAAAGGAAAAGGCGGTCTTGC
TCAAGGCCAGGGTACAGATGCATCGCATGTGAAGGAGGCCATGGATGTGGCAGAAAATTT
TGCATCAATGAAATTGAGATGATGGTTCATGGTTCACAACTAACATTCTTGTTGATTCAG
ATGATCAAGATACATTGAAACACAAAAGGAAAATAGTGGACTAAAATGGAATCATTATAT
TGATGCTTCCACAACATTTTCTAAAGAAATGAGTGCAGATGAATACTTTATGGTATTATT
GTTTATTATTATCACTTTCTTGGCTTCAAATGGCATAACAATTAGAAAGCA