Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_01s0011g02260.t01
CDS Infomation

cds chromosome:12X:1:1989810:1993774:1 gene:VIT_01s0011g02260 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGTTACCCGCAACGGTGAGAGAAGCTTTCACGGCGATAGCCACGAGAGCGGCACCTTC
TCCGTCGAGGAAAATCCGGCGAGCAGGACTATGACTATAGAGGACGAAGATCACGGCGAT
GGTGGTCGTCGTCTTGATTCAGATGATAAGTTGCCGTCGGTGGAGATGATATTTAAGGGG
CAGGTGGAGCCCTCCTGGAGGGAGCAGCTGACTATTAGGGCTTTTGTTGTGAGCTTCGTG
TTGGGTGTGCTCTTCACTTTCATAGTGATGAAGCTCAATTTGACCACTGGGATTATTCCC
TCTCTGAATGTTTCCGCTGGCTTGTTGGGGTTCTTCTTCCTGAAGTCATGGACCAAGTTG
ATGGAGAAGTCTGGGTTGTTGAAGCAGCCCTTCACCAGGCAGGAGAACACCGTCATTCAG
ACTTGTGTCGTCGCCACCTCCGGCATCGCCTTCAGCGGAGGCTTTGGGAGCTACCTCTTT
GGAATGAGCTCCACTGTGGCAGGTCAGTCATCAGAGACCAACGCTGCCCAGAATACCAAG
GATCCAAGCTTGTCATGGATAATTGGGTTTCTGTTTGCCGTTAGTTTCCTTGGTCTCTTC
TCCGTTTTGCCTCTACGAAAGATCATGATTATAGACTACAAATTGACATACCCTAGTGGC
ACTGCAACTGCTCACCTTATCAACAGCTTCCATACTCCTCAAGGAGCCAAGCTAGCCAAG
AAACAAGTAAGAACTTTGGGCAAGTTTTTCTCCTTCAGCTTTCTGTGGGGTTTCTTCCAA
TGGTTCTTTACTGCTGGGGATGGATGTGGATTTGTAAACTTCCCCACATTTGGCCTGAAA
GCCTTTGACAACAGGTTTTACTTCGACTTCTCAGCTACATATGTTGGCGTAGGGATGATC
TGTCCTTACTTAATCAACATATCTGTATTAGTTGGTGCAATTCTGTCATGGGGCCTAATG
TGGCCTCTCATAAAAAACAGGAAGGGGGATTGGTACTCATCCGAGCTTAGTGAAAGCAGT
CTCCATGGCCTCCAAGGTTACCGGGTCTTCATCTCTATTGCAATGATCCTTGGTGATGGC
CTCTACAACTTTATCAAGGTTCTTGGCCGAACGATTCAGGGCTTCATCAAACAATATAAA
AAGAAGGAAGTTATACCTGTTACTGAACGAGACTCTCCTCAGAAAGTATCCAACTCTTAT
GATGACGAGGTCCGGACCAAACTCTTCCTCAAGGACGGAATACCAATGTGGGTATCATTC
GCTGGCTATGTTGCAATTGCTGCCGTTTCCATGGGAGTAATTCCTAAAATTTTCCATCAG
ATGAAATGGTACTATGTCCTGGTCATATACATAGTCGCTCCAGCTCTAGCCTTCTGTAAT
GCATATGGGGCTGGGCTGACTGACTGGTCACTTGCCTCAACTTATGGAAAGCTTGCCATT
TTCGCCATTGGAGCATGGGCCGGAGAATCTCATGGAGGTGTCCTTGCAGGTCTTGCCGCA
TGTGGGGTTATGATGAATATTGTATCAACAGCTTCTGACCTAATGCAGGACTTCAAAACT
GGGTACATGACTAGATCTTCCCCCAGATCCATGTTTTTCAGCCAAATAATTGGAACTGCG
ATGGGCTGCCTCATCTCCCCATGTGTCTTTTGGCTCTTCTACAAGGCTTTCAAAGATCTA
GGCTCACCGGAGTCACAGTACCCTGCACCTTATGCTGCTGTCTACAGAAGCATGTCAATC
CTGGGTGTTGAAGGCTTTGGGGCTTTGCCCGATCACTGCCTCACCCTTTGCTATGTCTTC
TTCTTCGGCGCCATCATTATCAACCTCATCAGGGATACTATTGCAAAGAAGTGGGCAAAG
TACATCCCCCTTCCAATGGCCATGGCTATACCATTTTATCTCGGCTCCTACTTTGCCATT
GACATGTGCGTTGGAAGCTTGATCCTCTTTATCTGGGGCAAGCTGAACAAGGCCAAGGCA
GACGCTTTTGGACCAGCTGTTGCTTCTGGTTTGATATGTGGCGATGGAATATGGACTTTG
CCCAGTTCCATCCTAGCTTTGGCTGGGGTGCAACCACCCATCTGCATGAAGTTTCTGTCA
AGGGGAACAAACTCCATGGTGGATAAATTCTTAAGTTCTTAG

Peptide Sequence

PEP ID

VIT_01s0011g02260.t01
PEP Infomation

pep chromosome:12X:1:1989810:1993774:1 gene:VIT_01s0011g02260 transcript:VIT_01s0011g02260.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MVTRNGERSFHGDSHESGTFSVEENPASRTMTIEDEDHGDGGRRLDSDDKLPSVEMIFKG
QVEPSWREQLTIRAFVVSFVLGVLFTFIVMKLNLTTGIIPSLNVSAGLLGFFFLKSWTKL
MEKSGLLKQPFTRQENTVIQTCVVATSGIAFSGGFGSYLFGMSSTVAGQSSETNAAQNTK
DPSLSWIIGFLFAVSFLGLFSVLPLRKIMIIDYKLTYPSGTATAHLINSFHTPQGAKLAK
KQVRTLGKFFSFSFLWGFFQWFFTAGDGCGFVNFPTFGLKAFDNRFYFDFSATYVGVGMI
CPYLINISVLVGAILSWGLMWPLIKNRKGDWYSSELSESSLHGLQGYRVFISIAMILGDG
LYNFIKVLGRTIQGFIKQYKKKEVIPVTERDSPQKVSNSYDDEVRTKLFLKDGIPMWVSF
AGYVAIAAVSMGVIPKIFHQMKWYYVLVIYIVAPALAFCNAYGAGLTDWSLASTYGKLAI
FAIGAWAGESHGGVLAGLAACGVMMNIVSTASDLMQDFKTGYMTRSSPRSMFFSQIIGTA
MGCLISPCVFWLFYKAFKDLGSPESQYPAPYAAVYRSMSILGVEGFGALPDHCLTLCYVF
FFGAIIINLIRDTIAKKWAKYIPLPMAMAIPFYLGSYFAIDMCVGSLILFIWGKLNKAKA
DAFGPAVASGLICGDGIWTLPSSILALAGVQPPICMKFLSRGTNSMVDKFLSS

Transcript Sequence

Transcript ID

VIT_01s0011g02260.t01
Transcript Infomation

cdna chromosome:12X:1:1989810:1993774:1 gene:VIT_01s0011g02260 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATCCTCCAGACTCTACGTTCCAAAACCATGGTTACCCGCAACGGTGAGAGAAGCTTTCAC
GGCGATAGCCACGAGAGCGGCACCTTCTCCGTCGAGGAAAATCCGGCGAGCAGGACTATG
ACTATAGAGGACGAAGATCACGGCGATGGTGGTCGTCGTCTTGATTCAGATGATAAGTTG
CCGTCGGTGGAGATGATATTTAAGGGGCAGGTGGAGCCCTCCTGGAGGGAGCAGCTGACT
ATTAGGGCTTTTGTTGTGAGCTTCGTGTTGGGTGTGCTCTTCACTTTCATAGTGATGAAG
CTCAATTTGACCACTGGGATTATTCCCTCTCTGAATGTTTCCGCTGGCTTGTTGGGGTTC
TTCTTCCTGAAGTCATGGACCAAGTTGATGGAGAAGTCTGGGTTGTTGAAGCAGCCCTTC
ACCAGGCAGGAGAACACCGTCATTCAGACTTGTGTCGTCGCCACCTCCGGCATCGCCTTC
AGCGGAGGCTTTGGGAGCTACCTCTTTGGAATGAGCTCCACTGTGGCAGGTCAGTCATCA
GAGACCAACGCTGCCCAGAATACCAAGGATCCAAGCTTGTCATGGATAATTGGGTTTCTG
TTTGCCGTTAGTTTCCTTGGTCTCTTCTCCGTTTTGCCTCTACGAAAGATCATGATTATA
GACTACAAATTGACATACCCTAGTGGCACTGCAACTGCTCACCTTATCAACAGCTTCCAT
ACTCCTCAAGGAGCCAAGCTAGCCAAGAAACAAGTAAGAACTTTGGGCAAGTTTTTCTCC
TTCAGCTTTCTGTGGGGTTTCTTCCAATGGTTCTTTACTGCTGGGGATGGATGTGGATTT
GTAAACTTCCCCACATTTGGCCTGAAAGCCTTTGACAACAGGTTTTACTTCGACTTCTCA
GCTACATATGTTGGCGTAGGGATGATCTGTCCTTACTTAATCAACATATCTGTATTAGTT
GGTGCAATTCTGTCATGGGGCCTAATGTGGCCTCTCATAAAAAACAGGAAGGGGGATTGG
TACTCATCCGAGCTTAGTGAAAGCAGTCTCCATGGCCTCCAAGGTTACCGGGTCTTCATC
TCTATTGCAATGATCCTTGGTGATGGCCTCTACAACTTTATCAAGGTTCTTGGCCGAACG
ATTCAGGGCTTCATCAAACAATATAAAAAGAAGGAAGTTATACCTGTTACTGAACGAGAC
TCTCCTCAGAAAGTATCCAACTCTTATGATGACGAGGTCCGGACCAAACTCTTCCTCAAG
GACGGAATACCAATGTGGGTATCATTCGCTGGCTATGTTGCAATTGCTGCCGTTTCCATG
GGAGTAATTCCTAAAATTTTCCATCAGATGAAATGGTACTATGTCCTGGTCATATACATA
GTCGCTCCAGCTCTAGCCTTCTGTAATGCATATGGGGCTGGGCTGACTGACTGGTCACTT
GCCTCAACTTATGGAAAGCTTGCCATTTTCGCCATTGGAGCATGGGCCGGAGAATCTCAT
GGAGGTGTCCTTGCAGGTCTTGCCGCATGTGGGGTTATGATGAATATTGTATCAACAGCT
TCTGACCTAATGCAGGACTTCAAAACTGGGTACATGACTAGATCTTCCCCCAGATCCATG
TTTTTCAGCCAAATAATTGGAACTGCGATGGGCTGCCTCATCTCCCCATGTGTCTTTTGG
CTCTTCTACAAGGCTTTCAAAGATCTAGGCTCACCGGAGTCACAGTACCCTGCACCTTAT
GCTGCTGTCTACAGAAGCATGTCAATCCTGGGTGTTGAAGGCTTTGGGGCTTTGCCCGAT
CACTGCCTCACCCTTTGCTATGTCTTCTTCTTCGGCGCCATCATTATCAACCTCATCAGG
GATACTATTGCAAAGAAGTGGGCAAAGTACATCCCCCTTCCAATGGCCATGGCTATACCA
TTTTATCTCGGCTCCTACTTTGCCATTGACATGTGCGTTGGAAGCTTGATCCTCTTTATC
TGGGGCAAGCTGAACAAGGCCAAGGCAGACGCTTTTGGACCAGCTGTTGCTTCTGGTTTG
ATATGTGGCGATGGAATATGGACTTTGCCCAGTTCCATCCTAGCTTTGGCTGGGGTGCAA
CCACCCATCTGCATGAAGTTTCTGTCAAGGGGAACAAACTCCATGGTGGATAAATTCTTA
AGTTCTTAG