Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_01s0011g02240.t01
CDS Infomation

cds chromosome:12X:1:1967827:1970932:1 gene:VIT_01s0011g02240 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAGAGGAGAAGGCATGAGCATGATTTCGAAGAAGAGTGGAGGGAGGCGGGAATTTCG
AGAGGGTATTCTTACACTGACTACAACGTCAATGGCCGCAATATAGAGCGCATCGTAGAA
CCGGAAACGGTGGAGCAGGTGTTCAAGAACCTGGAGGTGCCGTCATGGAGGAAGCAGATA
ACGATTAGGGCAATGGTGACCAGCATCGTTCTCAGCTTTGTCTTCAACTTCGTAATCTGC
AAGCTTAGTCTCACCACTGGTATCATTCCCTCTTTCAACGTCGCTGCGGGGCTTCTCGGC
TTCGCCTTCGTCAAAGCCTGGGTTTCGCTCATTGAAAAGTTCGGACTCTTGAAGCAGCCT
TTCACTCGACAGGAGAACACTGTCATTCAGACTTGCGTGGTAGCCGCCTCCGGGATTGCT
TTTAACAATGGAACTTCAAGTTATTTGTTGGCAATGAGCTCAATCGTGGCTGATCAGGCG
GATAGGGACATTCCAACCAATGTGAAATCTCTCTCGCTTGGTTGGATAATTGGGTTTCTC
CTTACTGTGAGCTTCGTTGGCCTTTTCTTAATGGTTCCCTTGACAGAGATGATGATCATC
AAGTATAAGTTGACGTATCCAACTGGAACTGCAACTGCCTACCTTATCAATAGCTTTCAC
ACTCCTAGAGGAGCCAAGCTAGCAGGGCAGCAAGTTTCTGCGCTCTTCAAAAGCTTCTGT
TTCAGTTTTGCATTCGCCTTTTTTCAGTGGTTTTTCAGGTCTGGAAGCGACTGTGGGTTC
AGTAGTTTCCCTACATTTGGTCTCCAAGCATACTCTCATAGGTTCTACTTTGATTTCTCA
TCCACATACGTTGGTGTTGGAATGATTTGCCCTTATATGGTAAATGTATCTTTACTTCTG
GGTTCTATCTTGTCGTGGGGAATAATGTGGCCATTGATTGAAAAGAAGGCAGGCATCTGG
TACAGTGCCGACTTGCCTGCTAACAGTCTTCATGGCATCCAAGGATATAGGGTATTTCTG
GCTATTGCCATGATGCTGGGCGACGGGCTTTACCATGTTGCCTATATAATGGTGAAAACC
ATGGTAAATATCATACAGCAGCATAGCATGAAGAGGAAAGAAGCAACAGTCATTAATACT
CACTTTAGCAATCAGACGCTAGAGTCCATGTTGGAAAATTTCGATGAGAGACGCAGGAAA
GAGTTTTTCTTAAAAGATCAGATCCCTTCATGGGTTGCTATCCCTGGGTACATTTGCCTT
GCCGGCTTATCCATTGGCGTAATACCCGTTATCTTCCCGCAACTCAAACCGTATCATGTA
CTCGTTGCTTACCTTATGGCTCCCATTTTGGCCTTCTGCAATGCCTATGGATGTGGACTC
ACTGACTGGTCTCTAGCCTCCAACTATGGCAAGATGGCAATCATGGTCTTCAGCTCTTGG
GTCGGTCTTGAGAATGGTGGGGTTCTTGCTGGCCTAGCTTCTTGTGGGGTGATAATGAGC
ATTGTATCTACAGCTTCTGATCTGATGCAAGACTTCAAGACGGGATATCTCACGCTTGCA
TCCCCTCGCTCTATGTTCTTCAGCCAAGTCTTTGGAACCGCCATAGGATGTCTCTTCTCC
CCTCTGATCTTCTGGTTTTTCTACAAGGCTTACTCAGTAGGCGACCCCACCGGCTCCTAC
CCAGCACCTTATGGCCCCATGTACCGCGGCATGGCGCTTCTTGGAGTGGAAGGCGTCGCC
TCCCTCCCCAAAAATTGCCTTGAATTTGCAATCTGGTTTTTTGTTGCAGCCCTTCTTATA
AATCTGATAACCCATCTCTTCCAGCGCTATGAAACCAGGTACAGGATCTATAGATTCATT
CCTAGCCCAATGTGCATAGCCATACCTTTCTATCTTGGCGGATACTTTTCCATTGATATG
TGTATTGGGAGCTTGATTCTTCTCTTCTGGGGTATGAAGAACAAGCAGATGGCCAATGAC
TTCGGCCCTGCTGTGGCATCTGGCCTTATCTGTGGTGAGTCTTTGTGGGGTGTACCTGCA
GCTATGCTCTCTCTTGCTGGCCTCAATGCTCCAATTTGCATGAAGTTCCTTTCAGCCTCT
ACCAACAATAAAATTGATGCCATCTTGAGTGGTCTTTGA

Peptide Sequence

PEP ID

VIT_01s0011g02240.t01
PEP Infomation

pep chromosome:12X:1:1967827:1970932:1 gene:VIT_01s0011g02240 transcript:VIT_01s0011g02240.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MERRRHEHDFEEEWREAGISRGYSYTDYNVNGRNIERIVEPETVEQVFKNLEVPSWRKQI
TIRAMVTSIVLSFVFNFVICKLSLTTGIIPSFNVAAGLLGFAFVKAWVSLIEKFGLLKQP
FTRQENTVIQTCVVAASGIAFNNGTSSYLLAMSSIVADQADRDIPTNVKSLSLGWIIGFL
LTVSFVGLFLMVPLTEMMIIKYKLTYPTGTATAYLINSFHTPRGAKLAGQQVSALFKSFC
FSFAFAFFQWFFRSGSDCGFSSFPTFGLQAYSHRFYFDFSSTYVGVGMICPYMVNVSLLL
GSILSWGIMWPLIEKKAGIWYSADLPANSLHGIQGYRVFLAIAMMLGDGLYHVAYIMVKT
MVNIIQQHSMKRKEATVINTHFSNQTLESMLENFDERRRKEFFLKDQIPSWVAIPGYICL
AGLSIGVIPVIFPQLKPYHVLVAYLMAPILAFCNAYGCGLTDWSLASNYGKMAIMVFSSW
VGLENGGVLAGLASCGVIMSIVSTASDLMQDFKTGYLTLASPRSMFFSQVFGTAIGCLFS
PLIFWFFYKAYSVGDPTGSYPAPYGPMYRGMALLGVEGVASLPKNCLEFAIWFFVAALLI
NLITHLFQRYETRYRIYRFIPSPMCIAIPFYLGGYFSIDMCIGSLILLFWGMKNKQMAND
FGPAVASGLICGESLWGVPAAMLSLAGLNAPICMKFLSASTNNKIDAILSGL

Transcript Sequence

Transcript ID

VIT_01s0011g02240.t01
Transcript Infomation

cdna chromosome:12X:1:1967827:1970932:1 gene:VIT_01s0011g02240 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAGAGGAGAAGGCATGAGCATGATTTCGAAGAAGAGTGGAGGGAGGCGGGAATTTCG
AGAGGGTATTCTTACACTGACTACAACGTCAATGGCCGCAATATAGAGCGCATCGTAGAA
CCGGAAACGGTGGAGCAGGTGTTCAAGAACCTGGAGGTGCCGTCATGGAGGAAGCAGATA
ACGATTAGGGCAATGGTGACCAGCATCGTTCTCAGCTTTGTCTTCAACTTCGTAATCTGC
AAGCTTAGTCTCACCACTGGTATCATTCCCTCTTTCAACGTCGCTGCGGGGCTTCTCGGC
TTCGCCTTCGTCAAAGCCTGGGTTTCGCTCATTGAAAAGTTCGGACTCTTGAAGCAGCCT
TTCACTCGACAGGAGAACACTGTCATTCAGACTTGCGTGGTAGCCGCCTCCGGGATTGCT
TTTAACAATGGAACTTCAAGTTATTTGTTGGCAATGAGCTCAATCGTGGCTGATCAGGCG
GATAGGGACATTCCAACCAATGTGAAATCTCTCTCGCTTGGTTGGATAATTGGGTTTCTC
CTTACTGTGAGCTTCGTTGGCCTTTTCTTAATGGTTCCCTTGACAGAGATGATGATCATC
AAGTATAAGTTGACGTATCCAACTGGAACTGCAACTGCCTACCTTATCAATAGCTTTCAC
ACTCCTAGAGGAGCCAAGCTAGCAGGGCAGCAAGTTTCTGCGCTCTTCAAAAGCTTCTGT
TTCAGTTTTGCATTCGCCTTTTTTCAGTGGTTTTTCAGGTCTGGAAGCGACTGTGGGTTC
AGTAGTTTCCCTACATTTGGTCTCCAAGCATACTCTCATAGGTTCTACTTTGATTTCTCA
TCCACATACGTTGGTGTTGGAATGATTTGCCCTTATATGGTAAATGTATCTTTACTTCTG
GGTTCTATCTTGTCGTGGGGAATAATGTGGCCATTGATTGAAAAGAAGGCAGGCATCTGG
TACAGTGCCGACTTGCCTGCTAACAGTCTTCATGGCATCCAAGGATATAGGGTATTTCTG
GCTATTGCCATGATGCTGGGCGACGGGCTTTACCATGTTGCCTATATAATGGTGAAAACC
ATGGTAAATATCATACAGCAGCATAGCATGAAGAGGAAAGAAGCAACAGTCATTAATACT
CACTTTAGCAATCAGACGCTAGAGTCCATGTTGGAAAATTTCGATGAGAGACGCAGGAAA
GAGTTTTTCTTAAAAGATCAGATCCCTTCATGGGTTGCTATCCCTGGGTACATTTGCCTT
GCCGGCTTATCCATTGGCGTAATACCCGTTATCTTCCCGCAACTCAAACCGTATCATGTA
CTCGTTGCTTACCTTATGGCTCCCATTTTGGCCTTCTGCAATGCCTATGGATGTGGACTC
ACTGACTGGTCTCTAGCCTCCAACTATGGCAAGATGGCAATCATGGTCTTCAGCTCTTGG
GTCGGTCTTGAGAATGGTGGGGTTCTTGCTGGCCTAGCTTCTTGTGGGGTGATAATGAGC
ATTGTATCTACAGCTTCTGATCTGATGCAAGACTTCAAGACGGGATATCTCACGCTTGCA
TCCCCTCGCTCTATGTTCTTCAGCCAAGTCTTTGGAACCGCCATAGGATGTCTCTTCTCC
CCTCTGATCTTCTGGTTTTTCTACAAGGCTTACTCAGTAGGCGACCCCACCGGCTCCTAC
CCAGCACCTTATGGCCCCATGTACCGCGGCATGGCGCTTCTTGGAGTGGAAGGCGTCGCC
TCCCTCCCCAAAAATTGCCTTGAATTTGCAATCTGGTTTTTTGTTGCAGCCCTTCTTATA
AATCTGATAACCCATCTCTTCCAGCGCTATGAAACCAGGTACAGGATCTATAGATTCATT
CCTAGCCCAATGTGCATAGCCATACCTTTCTATCTTGGCGGATACTTTTCCATTGATATG
TGTATTGGGAGCTTGATTCTTCTCTTCTGGGGTATGAAGAACAAGCAGATGGCCAATGAC
TTCGGCCCTGCTGTGGCATCTGGCCTTATCTGTGGTGAGTCTTTGTGGGGTGTACCTGCA
GCTATGCTCTCTCTTGCTGGCCTCAATGCTCCAATTTGCATGAAGTTCCTTTCAGCCTCT
ACCAACAATAAAATTGATGCCATCTTGAGTGGTCTTTGA