Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_01s0011g02100.t01
CDS Infomation

cds chromosome:12X:1:1779062:1784511:1 gene:VIT_01s0011g02100 gene_biotype:protein_coding transcript_biotype:protein_coding description:ATP-dependent Clp protease proteolytic subunit [Source:UniProtKB/TrEMBL;Acc:F6HF49]
Sequence

ATGCGTGCCCTAACCAAACTCTGCAGTGCCGCCACCGGACGGCGGTTGTTTCCGGCGGCG
ACTGCAGTGTCTACCAGGTCATACGCTCTGATTCCGATGGTGATAGAACACTCCTCAAGA
GGGGAGAGAGCCTACGACATCTTCTCTCGCCTTCTCAAAGAGCGAATCGTGTGTATCAAC
GGTCCGATCTCCGACGATACTGCCCACGTCGTGGTCGCTCAACTGCTCTTCCTTGAGTCC
GAGAACCCTTCTAAACCTATCCACATGTATCTCAACTCTCCCGGCGGCGCTGTCAGCGCA
GGTCTTGCTATTTATGATACAATGCAGTACATTAGGTCGCCAGTTAATACCATTTGTTTG
GGTCAAGCTGCATCAATGGGTTCCCTTCTATTGGCTGCGGGTGCCAAGGGTGAGAGACGG
GCACTCCCAAATGCCACAATTATGATTCACCAGCCTTCAGGTGGGTACAGTGGGCAGGCA
AAGGATATGACTATTCACACAAAACAGATTATTCGGGTTTGGGATTCGCTGAATGCATTG
TATGCAAAGCATACTGGACAGTCATTAGATATTATTCAAAAGAATATGGATAGGGATTAT
TTTATGACCCCAGAAGAGGCAAAGGAGTTTGGGATAATTGATGAGGTTATTGATCAGAGA
CCAATGGCTTTAGTGACTGATGCAGTTGGGAATGAAGGCAAAGATAAAGGCTCTAATAAG
GATTGA

Peptide Sequence

PEP ID

VIT_01s0011g02100.t01
PEP Infomation

pep chromosome:12X:1:1779062:1784511:1 gene:VIT_01s0011g02100 transcript:VIT_01s0011g02100.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:ATP-dependent Clp protease proteolytic subunit [Source:UniProtKB/TrEMBL;Acc:F6HF49]
Sequence

MRALTKLCSAATGRRLFPAATAVSTRSYALIPMVIEHSSRGERAYDIFSRLLKERIVCIN
GPISDDTAHVVVAQLLFLESENPSKPIHMYLNSPGGAVSAGLAIYDTMQYIRSPVNTICL
GQAASMGSLLLAAGAKGERRALPNATIMIHQPSGGYSGQAKDMTIHTKQIIRVWDSLNAL
YAKHTGQSLDIIQKNMDRDYFMTPEEAKEFGIIDEVIDQRPMALVTDAVGNEGKDKGSNK
D

Transcript Sequence

Transcript ID

VIT_01s0011g02100.t01
Transcript Infomation

cdna chromosome:12X:1:1779062:1784511:1 gene:VIT_01s0011g02100 gene_biotype:protein_coding transcript_biotype:protein_coding description:ATP-dependent Clp protease proteolytic subunit [Source:UniProtKB/TrEMBL;Acc:F6HF49]
Sequence

GGAGAGGAAGCCAAACTGAACCTTCTACTGAAACGAGAACTCTTGAATCCATTAACCTAA
GCCAATCCAGAACCTTCTCCTCAGAACTGTTGAATCCGTTAACCCTAACTCCATTTTGCA
GAGCCATGCGTGCCCTAACCAAACTCTGCAGTGCCGCCACCGGACGGCGGTTGTTTCCGG
CGGCGACTGCAGTGTCTACCAGGTCATACGCTCTGATTCCGATGGTGATAGAACACTCCT
CAAGAGGGGAGAGAGCCTACGACATCTTCTCTCGCCTTCTCAAAGAGCGAATCGTGTGTA
TCAACGGTCCGATCTCCGACGATACTGCCCACGTCGTGGTCGCTCAACTGCTCTTCCTTG
AGTCCGAGAACCCTTCTAAACCTATCCACATGTATCTCAACTCTCCCGGCGGCGCTGTCA
GCGCAGGTCTTGCTATTTATGATACAATGCAGTACATTAGGTCGCCAGTTAATACCATTT
GTTTGGGTCAAGCTGCATCAATGGGTTCCCTTCTATTGGCTGCGGGTGCCAAGGGTGAGA
GACGGGCACTCCCAAATGCCACAATTATGATTCACCAGCCTTCAGGTGGGTACAGTGGGC
AGGCAAAGGATATGACTATTCACACAAAACAGATTATTCGGGTTTGGGATTCGCTGAATG
CATTGTATGCAAAGCATACTGGACAGTCATTAGATATTATTCAAAAGAATATGGATAGGG
ATTATTTTATGACCCCAGAAGAGGCAAAGGAGTTTGGGATAATTGATGAGGTTATTGATC
AGAGACCAATGGCTTTAGTGACTGATGCAGTTGGGAATGAAGGCAAAGATAAAGGCTCTA
ATAAGGATTGAGGGTGATGGGGTAGCTGGCTGCAGCTATGGCTTTATTTCGGGGACTCTT
TTTTTTTTTTGTACGGGGCTAGCATTCACTTATCTATTTATGAATCAAGTCATTATTTTA
ATACTCAATAATTTAGATTTTCATCGGGAACATGCTTAGCAATTTTGTGAGACTTTCTTT
TTTTCACATATTTATGACTGAAACTCAAGCGGATTCTCATCAACACCATTTTGATTGTAA
ATTTGAAGATGGCATTGCTATCACATTCATAGGAAAGGAGTTTCTGTAACACTCGGATAA
AA