Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_01s0011g01640.t01
CDS Infomation

cds chromosome:12X:1:1467398:1495262:1 gene:VIT_01s0011g01640 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCTGATACTGCAACAAATCAAGTGGGTAACTCTTATGGTGAGGCAAATGACTCTCAG
GAAATTGCATTTGATTTAGGAGTATTTGTTGGGGATTTAAATTTTGAGGAGGATGTAAGC
AGTGATGATATATCCCTGGAAGGATTACAAAAAGAATTAGAAGAATGTAGAAACGATGAT
GTAGTTGCAAACATACTGTCTAAAGGTACAAAATTAAGAGAATATACAAAGGGTGTTGAG
AACAATTTACGGCAAGTCGAGTTGGACTCGATTCAGGATTATATAAAAGAAAGTGATAAT
TTAGTCTCTCTTCATGATCAAATCCGTGATTGCGACAGTATACTGTCACAGATGGAAACA
CTTCTCAGTGGATTTCAGGCTGAGATTGGTTCCATAAGTTCAGACATAAAAATTCTCCAG
GAGAAGTCTATGGATATGGGTCTGAAGCTGAAGAACCGTAAGGTAGCAGAGTCAAAACTG
GCAAAATTTGTTGAAGATATTATAGTTCCTCCAAGGATGGTAGACATAATTGTTGATGGA
GAGGTGAATGAGGAATATATGAGAACTCTTGAGATCCTAAGTAAGAAGTTGAAGTTTGTT
GAAGTGGAACCTATGGTTAAAACTTCAAAAGCTCTAAAAGATGTTCAACCCGAGCTAGAA
AAACTTCGTCAAAAAGCAGTCTCAAAGGTGTTTGAGTTCATTGTTCAGAAGCTTTATGCA
TTGAGGAAACCTAAAACAAATATCCAGATCCTTCAACAGAGTGTTCTTCTAAAATACAAG
TATGTTGTTTCCTTTCTCAAGGAACATGGCAAAGAGGTATATATTGAAGTCCGTGCGGCA
TACATTGATACAATGAACAAGGTTTTAAGTGCACATTTCCGTGCTTATATTCAAGCTTTA
GAAAAATTGCAATTGGATATAGCGACATCCAGCGATTTGATTGGTGTTGACACCAGAAGC
ACCAGTCTTTTCTCAAGAGGAAGAGAACCTTTGAAGAACCGATCTGCTGTTTATGCTTTG
GGGGAGAGGATAAGCATTTTAAAGGAGATTGATCAACCTGCATTGATTCCACATATTGCT
GAAGCCAGCTCCACAAAGTATCCTTATGAGGTCCTCTTCAGGAGTTTGCACAAGCTGCTT
ATGGATACTGCTAGTTCCGAGTACCTTTTCTGTGATGATTTTTTTGGGGAAGAAAATATA
TTTTATGAAATTTTTGCAGGTCCATTTGCTGTCATTGATGAACACTTCAATTCAATCCTT
CCAAATTGTTTTGATGCAATTGGCCTGATGCTTATGATCCGCATAATACATCAACACCAG
CTTGTTATGTCTCGTCGGCGGATTCCATGCTTGGATTCATATTTGGATAAGGTCAATATT
TCTCTGTGGCCACGTTTCAAGATGGTATTTGACATGCACTTGAACAGCTTGCGCAATGCC
AACATGAGGGCATTGTGGGAAGATGATATTCATCCTCACTATGTCATGAGGCGTTATGCT
GAGTTTACATCCTCACTTATTCACCTCAATGTTGAATATGGAGATGGGCAGCTTGAACTA
AACTTGGAACGGTTGAGGATGGCTATTGATGATATGGTCATCAAGCTTGCTAAAACATTC
TCAAAAACTAAACTACAGACTGTGTTTCTTATAAACAACTATGATATGACAATTGCCATT
TTGAAGGAAGCTGGTCCAGAAGGTGGGAAAATTCAACTGCACTTCGAGGAACTTCTGAAG
AGCAACACAGCAATATTTGTGGAGGAACTACTACTAGAGCATTTCGGTGACCTAATCAAG
TTTGTAAAGACCAGGGCCTCCGAGGACCCGAGTTCCAGCTCCGAGAGGCCCATAACTGTG
GCTGAAGTTGAACCGCTTGTGAAGGACTTTGCAAGCAGATGGAAATCTGCGATAGAGCTG
ATGCACAAAGATGTGATTACCTCTTTCAGCAATTTCTTGTGCGGTATGGAGATCTTGAGA
GCTGCATTGACACAGCTGCTGCTTTATTATACCAGACTTTCCGATTGCATAAAAAGAATT
CCCGGTGGATCGGCCCTGAACAAAGATCTCGTTTCCATATCATCGATCATGTATGAAATC
AGAAAATACTCGAGAACTTTCTAA

Peptide Sequence

PEP ID

VIT_01s0011g01640.t01
PEP Infomation

pep chromosome:12X:1:1467398:1495262:1 gene:VIT_01s0011g01640 transcript:VIT_01s0011g01640.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MADTATNQVGNSYGEANDSQEIAFDLGVFVGDLNFEEDVSSDDISLEGLQKELEECRNDD
VVANILSKGTKLREYTKGVENNLRQVELDSIQDYIKESDNLVSLHDQIRDCDSILSQMET
LLSGFQAEIGSISSDIKILQEKSMDMGLKLKNRKVAESKLAKFVEDIIVPPRMVDIIVDG
EVNEEYMRTLEILSKKLKFVEVEPMVKTSKALKDVQPELEKLRQKAVSKVFEFIVQKLYA
LRKPKTNIQILQQSVLLKYKYVVSFLKEHGKEVYIEVRAAYIDTMNKVLSAHFRAYIQAL
EKLQLDIATSSDLIGVDTRSTSLFSRGREPLKNRSAVYALGERISILKEIDQPALIPHIA
EASSTKYPYEVLFRSLHKLLMDTASSEYLFCDDFFGEENIFYEIFAGPFAVIDEHFNSIL
PNCFDAIGLMLMIRIIHQHQLVMSRRRIPCLDSYLDKVNISLWPRFKMVFDMHLNSLRNA
NMRALWEDDIHPHYVMRRYAEFTSSLIHLNVEYGDGQLELNLERLRMAIDDMVIKLAKTF
SKTKLQTVFLINNYDMTIAILKEAGPEGGKIQLHFEELLKSNTAIFVEELLLEHFGDLIK
FVKTRASEDPSSSSERPITVAEVEPLVKDFASRWKSAIELMHKDVITSFSNFLCGMEILR
AALTQLLLYYTRLSDCIKRIPGGSALNKDLVSISSIMYEIRKYSRTF

Transcript Sequence

Transcript ID

VIT_01s0011g01640.t01
Transcript Infomation

cdna chromosome:12X:1:1467398:1495262:1 gene:VIT_01s0011g01640 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TTGACACTCTCGACGGTTCAGTTGGCGCCAGACGATGACTAAAATGGCTGATACTGCAAC
AAATCAAGTGGGTAACTCTTATGGTGAGGCAAATGACTCTCAGGAAATTGCATTTGATTT
AGGAGTATTTGTTGGGGATTTAAATTTTGAGGAGGATGTAAGCAGTGATGATATATCCCT
GGAAGGATTACAAAAAGAATTAGAAGAATGTAGAAACGATGATGTAGTTGCAAACATACT
GTCTAAAGGTACAAAATTAAGAGAATATACAAAGGGTGTTGAGAACAATTTACGGCAAGT
CGAGTTGGACTCGATTCAGGATTATATAAAAGAAAGTGATAATTTAGTCTCTCTTCATGA
TCAAATCCGTGATTGCGACAGTATACTGTCACAGATGGAAACACTTCTCAGTGGATTTCA
GGCTGAGATTGGTTCCATAAGTTCAGACATAAAAATTCTCCAGGAGAAGTCTATGGATAT
GGGTCTGAAGCTGAAGAACCGTAAGGTAGCAGAGTCAAAACTGGCAAAATTTGTTGAAGA
TATTATAGTTCCTCCAAGGATGGTAGACATAATTGTTGATGGAGAGGTGAATGAGGAATA
TATGAGAACTCTTGAGATCCTAAGTAAGAAGTTGAAGTTTGTTGAAGTGGAACCTATGGT
TAAAACTTCAAAAGCTCTAAAAGATGTTCAACCCGAGCTAGAAAAACTTCGTCAAAAAGC
AGTCTCAAAGGTGTTTGAGTTCATTGTTCAGAAGCTTTATGCATTGAGGAAACCTAAAAC
AAATATCCAGATCCTTCAACAGAGTGTTCTTCTAAAATACAAGTATGTTGTTTCCTTTCT
CAAGGAACATGGCAAAGAGGTATATATTGAAGTCCGTGCGGCATACATTGATACAATGAA
CAAGGTTTTAAGTGCACATTTCCGTGCTTATATTCAAGCTTTAGAAAAATTGCAATTGGA
TATAGCGACATCCAGCGATTTGATTGGTGTTGACACCAGAAGCACCAGTCTTTTCTCAAG
AGGAAGAGAACCTTTGAAGAACCGATCTGCTGTTTATGCTTTGGGGGAGAGGATAAGCAT
TTTAAAGGAGATTGATCAACCTGCATTGATTCCACATATTGCTGAAGCCAGCTCCACAAA
GTATCCTTATGAGGTCCTCTTCAGGAGTTTGCACAAGCTGCTTATGGATACTGCTAGTTC
CGAGTACCTTTTCTGTGATGATTTTTTTGGGGAAGAAAATATATTTTATGAAATTTTTGC
AGGTCCATTTGCTGTCATTGATGAACACTTCAATTCAATCCTTCCAAATTGTTTTGATGC
AATTGGCCTGATGCTTATGATCCGCATAATACATCAACACCAGCTTGTTATGTCTCGTCG
GCGGATTCCATGCTTGGATTCATATTTGGATAAGGTCAATATTTCTCTGTGGCCACGTTT
CAAGATGGTATTTGACATGCACTTGAACAGCTTGCGCAATGCCAACATGAGGGCATTGTG
GGAAGATGATATTCATCCTCACTATGTCATGAGGCGTTATGCTGAGTTTACATCCTCACT
TATTCACCTCAATGTTGAATATGGAGATGGGCAGCTTGAACTAAACTTGGAACGGTTGAG
GATGGCTATTGATGATATGGTCATCAAGCTTGCTAAAACATTCTCAAAAACTAAACTACA
GACTGTGTTTCTTATAAACAACTATGATATGACAATTGCCATTTTGAAGGAAGCTGGTCC
AGAAGGTGGGAAAATTCAACTGCACTTCGAGGAACTTCTGAAGAGCAACACAGCAATATT
TGTGGAGGAACTACTACTAGAGCATTTCGGTGACCTAATCAAGTTTGTAAAGACCAGGGC
CTCCGAGGACCCGAGTTCCAGCTCCGAGAGGCCCATAACTGTGGCTGAAGTTGAACCGCT
TGTGAAGGACTTTGCAAGCAGATGGAAATCTGCGATAGAGCTGATGCACAAAGATGTGAT
TACCTCTTTCAGCAATTTCTTGTGCGGTATGGAGATCTTGAGAGCTGCATTGACACAGCT
GCTGCTTTATTATACCAGACTTTCCGATTGCATAAAAAGAATTCCCGGTGGATCGGCCCT
GAACAAAGATCTCGTTTCCATATCATCGATCATGTATGAAATCAGAAAATACTCGAGAAC
TTTCTAAATCATCGACCTAATGCTGCTGCTCTGCTGGTGGAAAACAAGGCTTTGAACAGA
GGTTGATTGTTGTCATGGCAACGGAAACCATTTTGGACGTAGGCTCAAATTTGAGGATAA
ACTTAACAAACATTAAAATGGAGAGGGAAAAAAATACAGAAAAACAAACTATAATTCGTA
ATTATTTTGAATGTTTCGTGACCGTTGCAAACGGTGAGTAAAGTTTGGAATGTGATTTTT
ATTATTAGTTGTTTCTAATAAAATAGGAATTTGAACT