Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_01s0011g01440.t01
CDS Infomation

cds chromosome:12X:1:1242559:1244982:-1 gene:VIT_01s0011g01440 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAAACGGGTTTTGTAGCAGTGGAGAAGATAGGGGGCAGATCAACGGTGACAAGATGC
TTCTCAAAGTATCCCCTGAAATTCATAATACCCAGAAAGGTGGGTTCCTCCATAACTGAT
GCTGTTTGGATTTACAGCCTCACCTATGGTGGTGGCATAGTCTCTGGAGATTCCATTTCA
TGTGGATTTACCATAGGAGATGGTTGTACCACAGTCTTGACAACCCAAGCTTCCACTAAG
GTATACAAGTCTGTAGGATCAAAATGCTCAGAACAAGTCTTGGAGGCAAGAATTGGAAGC
AATGCTCTTTTGGCCATCATTCCGGATCCAGTGACATGTTTTTCTACTGCAAGATACTCT
CAGAAGCAGGTCTTCAGAGTGTTCTCTGATTCATGCCTGGTTATTGTTGATTGGATTACC
AGTGGACGCCATGCAACCGGAGAAAAGTGGGATTTTGAACTTTACAAGAGCTCCAACCAC
ATTTTCCTAGATGATCAGCCTTTGTTTCTTGATACGGTATTGCTGGAGCAAGGAAGCGTC
TCTTCTATTGCTGAACGCATGAAGGATTACCAAGTAATTGCAATGCTCGTACTCTTAGGG
CCAACGTTGAAACACATCCAGAACCAAGTTCAAGAAGATGTTAAGAGGATGATGTCTGAG
CAATTACGCTTTCCTTCTACTGCCACAGGACGCCACAGAAGTTCTGATCACCGCTTGCTA
AAACCTACTTTTATTGCTTCTTGCAGTCCTTTTGGTCCTAAGGGAATAGGAGTAGTTGTG
CGAATAGCTGCTACGACAACTGAATCGGTTTACAGTTTCCTTCGGCATCAGTTGGCTGGC
ATGGAACCGCTGCTTGGGGTACCGCCTTATTGTTGA

Peptide Sequence

PEP ID

VIT_01s0011g01440.t01
PEP Infomation

pep chromosome:12X:1:1242559:1244982:-1 gene:VIT_01s0011g01440 transcript:VIT_01s0011g01440.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

METGFVAVEKIGGRSTVTRCFSKYPLKFIIPRKVGSSITDAVWIYSLTYGGGIVSGDSIS
CGFTIGDGCTTVLTTQASTKVYKSVGSKCSEQVLEARIGSNALLAIIPDPVTCFSTARYS
QKQVFRVFSDSCLVIVDWITSGRHATGEKWDFELYKSSNHIFLDDQPLFLDTVLLEQGSV
SSIAERMKDYQVIAMLVLLGPTLKHIQNQVQEDVKRMMSEQLRFPSTATGRHRSSDHRLL
KPTFIASCSPFGPKGIGVVVRIAATTTESVYSFLRHQLAGMEPLLGVPPYC

Transcript Sequence

Transcript ID

VIT_01s0011g01440.t01
Transcript Infomation

cdna chromosome:12X:1:1242559:1244982:-1 gene:VIT_01s0011g01440 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ACCAAACAGAGGGAAGAGATGGAAACGGGTTTTGTAGCAGTGGAGAAGATAGGGGGCAGA
TCAACGGTGACAAGATGCTTCTCAAAGTATCCCCTGAAATTCATAATACCCAGAAAGGTG
GGTTCCTCCATAACTGATGCTGTTTGGATTTACAGCCTCACCTATGGTGGTGGCATAGTC
TCTGGAGATTCCATTTCATGTGGATTTACCATAGGAGATGGTTGTACCACAGTCTTGACA
ACCCAAGCTTCCACTAAGGTATACAAGTCTGTAGGATCAAAATGCTCAGAACAAGTCTTG
GAGGCAAGAATTGGAAGCAATGCTCTTTTGGCCATCATTCCGGATCCAGTGACATGTTTT
TCTACTGCAAGATACTCTCAGAAGCAGGTCTTCAGAGTGTTCTCTGATTCATGCCTGGTT
ATTGTTGATTGGATTACCAGTGGACGCCATGCAACCGGAGAAAAGTGGGATTTTGAACTT
TACAAGAGCTCCAACCACATTTTCCTAGATGATCAGCCTTTGTTTCTTGATACGGTATTG
CTGGAGCAAGGAAGCGTCTCTTCTATTGCTGAACGCATGAAGGATTACCAAGTAATTGCA
ATGCTCGTACTCTTAGGGCCAACGTTGAAACACATCCAGAACCAAGTTCAAGAAGATGTT
AAGAGGATGATGTCTGAGCAATTACGCTTTCCTTCTACTGCCACAGGACGCCACAGAAGT
TCTGATCACCGCTTGCTAAAACCTACTTTTATTGCTTCTTGCAGTCCTTTTGGTCCTAAG
GGAATAGGAGTAGTTGTGCGAATAGCTGCTACGACAACTGAATCGGTTTACAGTTTCCTT
CGGCATCAGTTGGCTGGCATGGAACCGCTGCTTGGGGTACCGCCTTATTGTTGA