Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_01s0011g01290.t01
CDS Infomation

cds chromosome:12X:1:1098416:1102667:-1 gene:VIT_01s0011g01290 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCTCATTCATATGTGAGGAGAATCTCGAAGCCTCAAATGATGATCGTCGTTGTCACA
TCCTCATCCTCGATTTTCTCTTTCTGTTTCGCGCTTTCACTGCTGGCTTTCTTTGCTTCT
GCTCATATTCTCACTGATACAGAGGGCAAGAACAGTGATTTGTTTCCTGAAGTTCTACGG
GAAGAAGCAGTGGCAAGGCTCTATGAACTTGGAAAGGTAAGCGACGCTGAGGGCTATCTT
GAGCGGACCTTCTTGAGTCCAGCGTCTATAAGGGCAGGAAATCTTATTCGAGAATGGATG
GAGGATGCCGGTTTGAGAACGTGGATGGACCAAATGGGCAATGTACATGGTCGAGTTGAA
GGAATGAATCCAAGTGCTGATGCTTTGTTAATTGGTTCTCATTTGGATACGGTTGTTGAT
GCTGGAATATTTGATGGGTCACTAGGCATAATTTCTGCTATCTCTGTGTTGAAGGTTTTG
AATATCACTGCCAAGTTACAGAAGTTGAGGCGGCCAATTGAGGTGATTGCATTTAGTGAT
GAGGAGGGAGTTAGGTTTCAGTCCACCTTTTTAGGAAGTGCAGCTGTAGCTGGTGTTTTA
CCAGCTTCAGCCTTGCAGATATCTGATAAGAGTGGTGTAACAGTGCAAAATGCTCTTATG
GATAACTCTATAGAAGCTACAGAGGAAACATTGTCTCAACTGAAGTATGACCCAAAATCT
GTTTGGGGTTATGTTGAGGTTCACATTGAACAAGGACCTGTACTAGAAGGGATTGGTCTT
CCTCTAGCTGTGGTGAAAGGCATAGCAGGACAGACACGGCTAAAGGTAACAGTGAGAGGT
TCACAAGGGCATGCTGGAACGGTCCCAATGTCCATGCGCCAGGATCCTATGGCTGCTGCT
GCTGAATTAATTGTTCTATTGGAAAGCCTTTGCAAACGTCCCAAGGATTTTCTATCATAT
GATGGTCAATGTAATGGTTTTGCAGTTGAATCTCTTTCTGGTTCCCTGGTCTGTACTGTT
GGAGAGATATCATCCTGGCCAAGCGCAAGTAATGTGATTCCAGGACAGGTAACATTCACA
GTAGATTTACGTGCAATTGATGACATGGGGCGTGAGGCGGTCCTTTATGAATTATCTGAC
CGGATGTACCAAATATGTGAGAAGCGTTCTGTTTCTTGCACCATTGAGCGGAAGCATGAT
GCAAATGCTGTGATCTGCGATACTGAATTGAGCACACAGCTGAAGTCTGCTACATACTCT
ACACTCAAAAGAATGGAAGGCGAGATTCAAGGTGATGTGCCTGTGCTGATGAGTGGAGCA
GGGCACGATGCCATGGCAATGTCCCATTTAACTAAGGTTGGCATGCTGTTTGTGCGGTGT
CGCGGGGGAATCAGTCACTCTCCTGCAGAGCATGTGTTGGACGAGGATGTCTGGGCTGCT
GGCTTGGCCATTCTAGCATTCCTGGAGACCCACTTGTAA

Peptide Sequence

PEP ID

VIT_01s0011g01290.t01
PEP Infomation

pep chromosome:12X:1:1098416:1102667:-1 gene:VIT_01s0011g01290 transcript:VIT_01s0011g01290.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAHSYVRRISKPQMMIVVVTSSSSIFSFCFALSLLAFFASAHILTDTEGKNSDLFPEVLR
EEAVARLYELGKVSDAEGYLERTFLSPASIRAGNLIREWMEDAGLRTWMDQMGNVHGRVE
GMNPSADALLIGSHLDTVVDAGIFDGSLGIISAISVLKVLNITAKLQKLRRPIEVIAFSD
EEGVRFQSTFLGSAAVAGVLPASALQISDKSGVTVQNALMDNSIEATEETLSQLKYDPKS
VWGYVEVHIEQGPVLEGIGLPLAVVKGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMAAA
AELIVLLESLCKRPKDFLSYDGQCNGFAVESLSGSLVCTVGEISSWPSASNVIPGQVTFT
VDLRAIDDMGREAVLYELSDRMYQICEKRSVSCTIERKHDANAVICDTELSTQLKSATYS
TLKRMEGEIQGDVPVLMSGAGHDAMAMSHLTKVGMLFVRCRGGISHSPAEHVLDEDVWAA
GLAILAFLETHL

Transcript Sequence

Transcript ID

VIT_01s0011g01290.t01
Transcript Infomation

cdna chromosome:12X:1:1098416:1102667:-1 gene:VIT_01s0011g01290 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ACCAGGAAATTTTAGAGCAATTGTGGACAGCTGTGGTGTTTTGTGGAGGTGGTGACCGTG
GCGGCGGCGACGGCGGAGGTGGCAGTATTTGGGGCGCAGCCATGGCTCATTCATATGTGA
GGAGAATCTCGAAGCCTCAAATGATGATCGTCGTTGTCACATCCTCATCCTCGATTTTCT
CTTTCTGTTTCGCGCTTTCACTGCTGGCTTTCTTTGCTTCTGCTCATATTCTCACTGATA
CAGAGGGCAAGAACAGTGATTTGTTTCCTGAAGTTCTACGGGAAGAAGCAGTGGCAAGGC
TCTATGAACTTGGAAAGGTAAGCGACGCTGAGGGCTATCTTGAGCGGACCTTCTTGAGTC
CAGCGTCTATAAGGGCAGGAAATCTTATTCGAGAATGGATGGAGGATGCCGGTTTGAGAA
CGTGGATGGACCAAATGGGCAATGTACATGGTCGAGTTGAAGGAATGAATCCAAGTGCTG
ATGCTTTGTTAATTGGTTCTCATTTGGATACGGTTGTTGATGCTGGAATATTTGATGGGT
CACTAGGCATAATTTCTGCTATCTCTGTGTTGAAGGTTTTGAATATCACTGCCAAGTTAC
AGAAGTTGAGGCGGCCAATTGAGGTGATTGCATTTAGTGATGAGGAGGGAGTTAGGTTTC
AGTCCACCTTTTTAGGAAGTGCAGCTGTAGCTGGTGTTTTACCAGCTTCAGCCTTGCAGA
TATCTGATAAGAGTGGTGTAACAGTGCAAAATGCTCTTATGGATAACTCTATAGAAGCTA
CAGAGGAAACATTGTCTCAACTGAAGTATGACCCAAAATCTGTTTGGGGTTATGTTGAGG
TTCACATTGAACAAGGACCTGTACTAGAAGGGATTGGTCTTCCTCTAGCTGTGGTGAAAG
GCATAGCAGGACAGACACGGCTAAAGGTAACAGTGAGAGGTTCACAAGGGCATGCTGGAA
CGGTCCCAATGTCCATGCGCCAGGATCCTATGGCTGCTGCTGCTGAATTAATTGTTCTAT
TGGAAAGCCTTTGCAAACGTCCCAAGGATTTTCTATCATATGATGGTCAATGTAATGGTT
TTGCAGTTGAATCTCTTTCTGGTTCCCTGGTCTGTACTGTTGGAGAGATATCATCCTGGC
CAAGCGCAAGTAATGTGATTCCAGGACAGGTAACATTCACAGTAGATTTACGTGCAATTG
ATGACATGGGGCGTGAGGCGGTCCTTTATGAATTATCTGACCGGATGTACCAAATATGTG
AGAAGCGTTCTGTTTCTTGCACCATTGAGCGGAAGCATGATGCAAATGCTGTGATCTGCG
ATACTGAATTGAGCACACAGCTGAAGTCTGCTACATACTCTACACTCAAAAGAATGGAAG
GCGAGATTCAAGGTGATGTGCCTGTGCTGATGAGTGGAGCAGGGCACGATGCCATGGCAA
TGTCCCATTTAACTAAGGTTGGCATGCTGTTTGTGCGGTGTCGCGGGGGAATCAGTCACT
CTCCTGCAGAGCATGTGTTGGACGAGGATGTCTGGGCTGCTGGCTTGGCCATTCTAGCAT
TCCTGGAGACCCACTTGTAATTTAGTATATTTCAGTCACTGATGTGCCTCAAAAATAAAA
CTGAATTGTCCTAATGGATGATTTAAGGCAACAATGTTCGTCAATTTGTACAACCTCTTC
GTTAATTG