Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_01s0011g01240.t01
CDS Infomation

cds chromosome:12X:1:1071831:1078323:-1 gene:VIT_01s0011g01240 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGGAAGAAGAAGAAGAGAGTGGCAGCGAAGGTGTGGTGCTACTACTGCGATCGTGAA
TTCGAGGACGAGAAGATACTGGTACAGCACCAGAAGGCCAAGCACTTCAAATGCCATGTC
TGTCACAAGAAGCTCTCCACCGCCGGTGGCATGGTCATCCACGTCCTCCAGGTCCACAAA
GAGACCGTTTCCAAGGTTCCCAATGCAAAACCTGGCCGCGAGTCAACCGAAATTGAAATA
TATGGAATGGAAGGAATCCCACATGAAATCTTAGCAGCTCATTATGGAGAGGAAGATGAA
GATGTCCCATCAAAATTGGCTAAAGTGGAGATCCCAAGTTCACAACTTGGTGGTGGTGCA
GTACCTGGAACTTTAGGAATTGGAGTTCCTCCTCAACCAGCATTAGGTGCAATGCCACCA
GTTTACAATCCTGCATTAGCAGTGCCTCCTGCTGGTTGGCCGGTTCCTGCTCGTCCCCAG
CCTTGGTACTCTCAGCACCCAGCAATCTCTATTCCTCCTGCTCCATTGGGGATGACACAA
CAGCCTTTGTTTCCAATACAACCTGTCAAGCCTCCTCTGCCATCCACTATGTCTTCTGCT
CTTCAACCATCATTGCAAATAACTCCTCCTGGGCTTCCCATACCTTCACCTTCTGCTCCT
TTACCTCAACCCTTGTTCCCTGTCGGTGTTAATAACAATTTACCTACTAAAAATTCACCA
TTTTCTACACCTATGCTTTCAACAAGTATTCCATTAAGCTCTCAAGCAGAACTTAATAGC
TCAATTGAAGCACATTCCAGCACTAACAGTTCTCTTGCAAGTAGCTACAGTGCCCCAAGC
ATTCAAGGTGGGCCATCAATCAACTCACATTCTTATGCTTCTGGTCCAAATACTGGTGGT
CCTTCAATTGGGCCACCTCCTGTCATTGCAAATAAAGTTCCTGCTACTCAGCCAGCCGGC
AACGAGGTGTATTTGGTTTGGGATGATGAGGCAATGTCCATGGAGGAAAGAAGAATGTCA
TTAATGAAGTACCAGGTGCATGATGAAACTAGCCAGATGAGCTCAATTGATGCAGCCATA
GATAGAAGGATACTGGAGAGCAGGCTTGCTGGCCGAATGGCATTTTAG

Peptide Sequence

PEP ID

VIT_01s0011g01240.t01
PEP Infomation

pep chromosome:12X:1:1071831:1078323:-1 gene:VIT_01s0011g01240 transcript:VIT_01s0011g01240.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MGKKKKRVAAKVWCYYCDREFEDEKILVQHQKAKHFKCHVCHKKLSTAGGMVIHVLQVHK
ETVSKVPNAKPGRESTEIEIYGMEGIPHEILAAHYGEEDEDVPSKLAKVEIPSSQLGGGA
VPGTLGIGVPPQPALGAMPPVYNPALAVPPAGWPVPARPQPWYSQHPAISIPPAPLGMTQ
QPLFPIQPVKPPLPSTMSSALQPSLQITPPGLPIPSPSAPLPQPLFPVGVNNNLPTKNSP
FSTPMLSTSIPLSSQAELNSSIEAHSSTNSSLASSYSAPSIQGGPSINSHSYASGPNTGG
PSIGPPPVIANKVPATQPAGNEVYLVWDDEAMSMEERRMSLMKYQVHDETSQMSSIDAAI
DRRILESRLAGRMAF

Transcript Sequence

Transcript ID

VIT_01s0011g01240.t01
Transcript Infomation

cdna chromosome:12X:1:1071831:1078323:-1 gene:VIT_01s0011g01240 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AGGAAGAGAGAGAGAATCCAGAAAGAGAAAAAAAGGAGCGAAAAACCCTAGGAGCTAGGG
TTCGTTGTGAGATCGGAAATGGGGAAGAAGAAGAAGAGAGTGGCAGCGAAGGTGTGGTGC
TACTACTGCGATCGTGAATTCGAGGACGAGAAGATACTGGTACAGCACCAGAAGGCCAAG
CACTTCAAATGCCATGTCTGTCACAAGAAGCTCTCCACCGCCGGTGGCATGGTCATCCAC
GTCCTCCAGGTCCACAAAGAGACCGTTTCCAAGGTTCCCAATGCAAAACCTGGCCGCGAG
TCAACCGAAATTGAAATATATGGAATGGAAGGAATCCCACATGAAATCTTAGCAGCTCAT
TATGGAGAGGAAGATGAAGATGTCCCATCAAAATTGGCTAAAGTGGAGATCCCAAGTTCA
CAACTTGGTGGTGGTGCAGTACCTGGAACTTTAGGAATTGGAGTTCCTCCTCAACCAGCA
TTAGGTGCAATGCCACCAGTTTACAATCCTGCATTAGCAGTGCCTCCTGCTGGTTGGCCG
GTTCCTGCTCGTCCCCAGCCTTGGTACTCTCAGCACCCAGCAATCTCTATTCCTCCTGCT
CCATTGGGGATGACACAACAGCCTTTGTTTCCAATACAACCTGTCAAGCCTCCTCTGCCA
TCCACTATGTCTTCTGCTCTTCAACCATCATTGCAAATAACTCCTCCTGGGCTTCCCATA
CCTTCACCTTCTGCTCCTTTACCTCAACCCTTGTTCCCTGTCGGTGTTAATAACAATTTA
CCTACTAAAAATTCACCATTTTCTACACCTATGCTTTCAACAAGTATTCCATTAAGCTCT
CAAGCAGAACTTAATAGCTCAATTGAAGCACATTCCAGCACTAACAGTTCTCTTGCAAGT
AGCTACAGTGCCCCAAGCATTCAAGGTGGGCCATCAATCAACTCACATTCTTATGCTTCT
GGTCCAAATACTGGTGGTCCTTCAATTGGGCCACCTCCTGTCATTGCAAATAAAGTTCCT
GCTACTCAGCCAGCCGGCAACGAGGTGTATTTGGTTTGGGATGATGAGGCAATGTCCATG
GAGGAAAGAAGAATGTCATTAATGAAGTACCAGGTGCATGATGAAACTAGCCAGATGAGC
TCAATTGATGCAGCCATAGATAGAAGGATACTGGAGAGCAGGCTTGCTGGCCGAATGGCA
TTTTAGATCTGTGGCGATCATATCTCTGCATCATCAACATCTGGAATGTAGTTTGCACTT
GCAAGTGAGTGCTAGTCTTCTTAATCCTTGCTTGTCTTCTTTGCAAGAAAGGCTTAGGAG
AGAGCAATTCTTTTGACAATGGGCTGAGGGGTCTCAGAAAAAAGTAGACAAATTCTTTGT
A