Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_01s0011g01080.t01
CDS Infomation

cds chromosome:12X:1:949639:957904:1 gene:VIT_01s0011g01080 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCCTCTTCTCCTCTTCTCCACCACCCAACCCACTGCTTCATCTCCAGTAACCAGGGT
TTCTGCAATGGGTTGTCTTCATCACGACCCAACTACTCTTGGATGCGCGGCTCTGGAAAT
AACATTAGACCCATCAAAGCTGCCGTAGAGATGCCTCCTTTTCCACTCTTTGAACCTCCA
CAAATTGAAAGTGACACACCTTCTCAGTTGGAGCCTGCAGACCCTGATTTCTACAAGATA
GGGTATGTTCGGAGTGTTCGAGCATACGGTGTTGAATTCAAGGAAGGGCCTGATGGATTT
GGAGTCTATGCCTCTAAAGATGTTGAACCACTTCGCAGAGCAAGGATGATCATGGAAATT
CCACTGGAATTGATGTTAACAATAAGAAAAAAGCTCCCATGGATGTTTTTCCCAGACATC
GTACCAGTGGGACATCCTATATTTGATATTATCAACTCAACCAATCCGGAGACAGATTGG
GATCTGCGGTTAGCATGCCTTCTTTTGTTTGCATTTGATCAAGAGGATAACTTCTGGCAG
CTATATGGTGATTTTTTACCTAGTGAAGGAGAGTGCACTAGCTTGCTTCTAGCTAAAGAG
GAGGACCTTTTGGAGCTGCAGGATCCGAAATTGGCTTCAACTATGAGAGATCAGCAACGC
CGAGCTTCAGAATTTTGGGAAAAGAATTGGCACTCTGGTGTCCCCCTTAAAATAAAGCGC
CTTGCTCGTGATCCCAATAGATTCATTTGGGCAGTGAGTATAGCACAATCACGATGCATA
AACATGCAAATGAGGATTGGTGCACTAGTTCAAGATGCAAATATGCTAATTCCTTATGCT
GACATGCTAAACCATTCCTTTCAGCCAAATTGTTTCTTTCATTGGCGTTTCAAGGACCGC
ATGCTTGAGGTGATGATAAATGCTGGACAAAGGATTAAGAAAGGGGAGGAGATGACTGTC
AATTACATGAGTGGGCTGAAAAATGACATGTTAATGCAAAGATATGGTTTTTCATCCCCT
GTGAATCCTTGGGATGTCATCCAGTTCTCTGGAAATGCACAGATTCATTTGGACTCCTTC
TTGTCAGTCTTCAATATATCTGGCCTTCCTGAAGAATATTATCATAACAGTCGGTTATCT
AATAATGGAGATAGTTTTGTTGATGGAGCGGTAATAGCAGCAGCAAGAACATTGCCCACT
TGGTCAGATGGGGATGTGCCTCCAATGCCAAGCATGGAGCGGAAAGCTGTGAAGCAGTTA
CAAGAAGAATGTCAACAGATGCTTTTGGAATTCCCCACAACTTCGGAGCAAGATCAAAAA
ATTCTAGATTCTATGACAGAAGAAAGGAGAACACTTGAAGCTGCAATCAAGTACAGATTG
CACAGGAAGTTGCTGATAGAGAAGGTCATCCAGGCATTGGACATTTACCAAGAGCGGATA
TTGTTTTGA

Peptide Sequence

PEP ID

VIT_01s0011g01080.t01
PEP Infomation

pep chromosome:12X:1:949639:957904:1 gene:VIT_01s0011g01080 transcript:VIT_01s0011g01080.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MASSPLLHHPTHCFISSNQGFCNGLSSSRPNYSWMRGSGNNIRPIKAAVEMPPFPLFEPP
QIESDTPSQLEPADPDFYKIGYVRSVRAYGVEFKEGPDGFGVYASKDVEPLRRARMIMEI
PLELMLTIRKKLPWMFFPDIVPVGHPIFDIINSTNPETDWDLRLACLLLFAFDQEDNFWQ
LYGDFLPSEGECTSLLLAKEEDLLELQDPKLASTMRDQQRRASEFWEKNWHSGVPLKIKR
LARDPNRFIWAVSIAQSRCINMQMRIGALVQDANMLIPYADMLNHSFQPNCFFHWRFKDR
MLEVMINAGQRIKKGEEMTVNYMSGLKNDMLMQRYGFSSPVNPWDVIQFSGNAQIHLDSF
LSVFNISGLPEEYYHNSRLSNNGDSFVDGAVIAAARTLPTWSDGDVPPMPSMERKAVKQL
QEECQQMLLEFPTTSEQDQKILDSMTEERRTLEAAIKYRLHRKLLIEKVIQALDIYQERI
LF

Transcript Sequence

Transcript ID

VIT_01s0011g01080.t01
Transcript Infomation

cdna chromosome:12X:1:949639:957904:1 gene:VIT_01s0011g01080 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GTGGATAACGTTCGCTGCTGCTGGTACTACTACTCCTAGTGTTACAGAAAGAGAGAAAAC
TACATGGAAAATTGAAATTTACAATGGCCTCTTCTCCTCTTCTCCACCACCCAACCCACT
GCTTCATCTCCAGTAACCAGGGTTTCTGCAATGGGTTGTCTTCATCACGACCCAACTACT
CTTGGATGCGCGGCTCTGGAAATAACATTAGACCCATCAAAGCTGCCGTAGAGATGCCTC
CTTTTCCACTCTTTGAACCTCCACAAATTGAAAGTGACACACCTTCTCAGTTGGAGCCTG
CAGACCCTGATTTCTACAAGATAGGGTATGTTCGGAGTGTTCGAGCATACGGTGTTGAAT
TCAAGGAAGGGCCTGATGGATTTGGAGTCTATGCCTCTAAAGATGTTGAACCACTTCGCA
GAGCAAGGATGATCATGGAAATTCCACTGGAATTGATGTTAACAATAAGAAAAAAGCTCC
CATGGATGTTTTTCCCAGACATCGTACCAGTGGGACATCCTATATTTGATATTATCAACT
CAACCAATCCGGAGACAGATTGGGATCTGCGGTTAGCATGCCTTCTTTTGTTTGCATTTG
ATCAAGAGGATAACTTCTGGCAGCTATATGGTGATTTTTTACCTAGTGAAGGAGAGTGCA
CTAGCTTGCTTCTAGCTAAAGAGGAGGACCTTTTGGAGCTGCAGGATCCGAAATTGGCTT
CAACTATGAGAGATCAGCAACGCCGAGCTTCAGAATTTTGGGAAAAGAATTGGCACTCTG
GTGTCCCCCTTAAAATAAAGCGCCTTGCTCGTGATCCCAATAGATTCATTTGGGCAGTGA
GTATAGCACAATCACGATGCATAAACATGCAAATGAGGATTGGTGCACTAGTTCAAGATG
CAAATATGCTAATTCCTTATGCTGACATGCTAAACCATTCCTTTCAGCCAAATTGTTTCT
TTCATTGGCGTTTCAAGGACCGCATGCTTGAGGTGATGATAAATGCTGGACAAAGGATTA
AGAAAGGGGAGGAGATGACTGTCAATTACATGAGTGGGCTGAAAAATGACATGTTAATGC
AAAGATATGGTTTTTCATCCCCTGTGAATCCTTGGGATGTCATCCAGTTCTCTGGAAATG
CACAGATTCATTTGGACTCCTTCTTGTCAGTCTTCAATATATCTGGCCTTCCTGAAGAAT
ATTATCATAACAGTCGGTTATCTAATAATGGAGATAGTTTTGTTGATGGAGCGGTAATAG
CAGCAGCAAGAACATTGCCCACTTGGTCAGATGGGGATGTGCCTCCAATGCCAAGCATGG
AGCGGAAAGCTGTGAAGCAGTTACAAGAAGAATGTCAACAGATGCTTTTGGAATTCCCCA
CAACTTCGGAGCAAGATCAAAAAATTCTAGATTCTATGACAGAAGAAAGGAGAACACTTG
AAGCTGCAATCAAGTACAGATTGCACAGGAAGTTGCTGATAGAGAAGGTCATCCAGGCAT
TGGACATTTACCAAGAGCGGATATTGTTTTGATCCTGGAATTTTCAGATTTTCCAGGAAA
ATGAGACAGTTTTGTTTGGTTGTAATGCTCCAAAATCGCCATTGTTTTGATAACTTCTGT
TCATTTGGTTACATTTGCATTTTCATCCCTAGTGTGAGCTTCATGTATCAACTCCGAATA
CTGTAGATGAGCCCACATGAAAGCTGCAAATACCTCACTTTGGATTAAAAAGCCAAAAGC
TCTTCTGTAAACTCAATAAGAGCTTCAGTAGCTATTTGGCAAATTTTATTAAAAGTTAGG
CAACTTTTACTTTTT