Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_01s0011g00590.t01
CDS Infomation

cds chromosome:12X:1:543821:549831:-1 gene:VIT_01s0011g00590 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCTTTGACGGCTGCTTCAGCTTCTTGCTCTCGGCTTTTGTCTTCTCTGCCCTTGTCT
CCGAGGGGAATTTCAGGAAACTATGGACTACTCAGGATCAGAACAGTTGTTTCTCAGAGA
CCCTTTTCGCCGTTGCCGGAGATTCGGGCGTCTCCGGATCCGATTGATTTTTCCGGCAGG
TGCTTGAGATTTGGCGGTTGGAATGAGATGTTGAGGAGGCGAGGCAGCAAGGGGGGAGAA
CTCGGGGTTCCAGCAGCTGCAGCTGCAGATGCGGATGGAGTTGTAGAGCCTGCCAAGAGC
TTGTCGGAGAGATTCCCGGCGCTGGTCACCGGATCCTTTTTCATGACATGGTATTTTTCG
AATATCGTCTTCAACATACTCAACAAGAAGGTTTATAATTATTTCCCGTACCCACGCTTT
GTTGCTTTTATCCATCTCCTGGTGGGTGTGATCTACTGTCTTGTCTGTTGGTCTCTTGGC
TTACCAAAACGTGCTCCGATCGATAAGGAGTTCCTGCTGCTCCTCACTCCTGTTGCCTTC
TGCCATGCCCTTGGACATGTTATGACTAATGTATCATTTGCATCTGTGGCTGTGTCATTC
ACACACACTATCAAAGCCCTCGAGCCATTCTTCAATGCTGCGGCTTCTCAATTTGTTTTA
GGCCACCAGATTCCCTTCCCCCTCTGGCTGTCATTGGCCCCTGTTGTTTTTGGTGTATCA
ATGGCATCACTCACTGAACTTTCTTTCAACTGGACTGGTTTCATCAGTGCAATGGTTGCA
AATTTTGCTTTTACCTACAGAAGTTTATATTTAAAGAAAGCAATGACAGGGATGGACAGT
GCAAATGTGTGCGCTTATACTGCAATGATCGCCCTTGTGTTTTGCTTCCCACCTGCACTA
CTTATTGATGGGCCTCAGCTGATGCAACATGGGTTCAGGGACGCTATTGCTAAAGTGGGT
CTAGCTAAATTAGTGTCTGATTTATTCTGGGTTGGATTGTTTTTCCATTTGGACAATCAG
CTTGCTGTCAGCACCTTGGAACGGGTTTCGCCGCTCACACATGCAGTTGGAAGTGTGTTG
AAGCGAGTGGTCGTCATTGTGTTGTCTACCATTGTATTTGGTAATAAGATCACGACGCAG
ACTGCGATCGGTACTGCAATAGCCATTACTGGCGTTGCCATCTACTCCCTCATAAGGGCA
AATATGGAGGAAGAAAACCAGAATGCTGCGGCAACTTAA

Peptide Sequence

PEP ID

VIT_01s0011g00590.t01
PEP Infomation

pep chromosome:12X:1:543821:549831:-1 gene:VIT_01s0011g00590 transcript:VIT_01s0011g00590.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MALTAASASCSRLLSSLPLSPRGISGNYGLLRIRTVVSQRPFSPLPEIRASPDPIDFSGR
CLRFGGWNEMLRRRGSKGGELGVPAAAAADADGVVEPAKSLSERFPALVTGSFFMTWYFS
NIVFNILNKKVYNYFPYPRFVAFIHLLVGVIYCLVCWSLGLPKRAPIDKEFLLLLTPVAF
CHALGHVMTNVSFASVAVSFTHTIKALEPFFNAAASQFVLGHQIPFPLWLSLAPVVFGVS
MASLTELSFNWTGFISAMVANFAFTYRSLYLKKAMTGMDSANVCAYTAMIALVFCFPPAL
LIDGPQLMQHGFRDAIAKVGLAKLVSDLFWVGLFFHLDNQLAVSTLERVSPLTHAVGSVL
KRVVVIVLSTIVFGNKITTQTAIGTAIAITGVAIYSLIRANMEEENQNAAAT

Transcript Sequence

Transcript ID

VIT_01s0011g00590.t01
Transcript Infomation

cdna chromosome:12X:1:543821:549831:-1 gene:VIT_01s0011g00590 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ACCAGACAAACCTCCTCTCTCTCTTCCTTTCTCTCTCTCTCCTCCATGTGATAGGCTGAT
AGCCACATTATTGTTATTATAGTGAGTTTCACTCTCAATTCCTCATCACCAACATTACTT
AATGGAGGAGCTTGTTTTTCTTGTTTTTCACAATTTTCTCCCCTGCTTTCTTCACTCCTC
CATTCCAACTTCATCAATGACTTCCATCTTCTTCGGCTCACCAAAATCCAGTTCCCGTTT
CAGTTGGTTGCTCCTCATGTAGATTTAGAGTCCTGCATTGTGGTTTGTTTCTGATGGCTT
TGACGGCTGCTTCAGCTTCTTGCTCTCGGCTTTTGTCTTCTCTGCCCTTGTCTCCGAGGG
GAATTTCAGGAAACTATGGACTACTCAGGATCAGAACAGTTGTTTCTCAGAGACCCTTTT
CGCCGTTGCCGGAGATTCGGGCGTCTCCGGATCCGATTGATTTTTCCGGCAGGTGCTTGA
GATTTGGCGGTTGGAATGAGATGTTGAGGAGGCGAGGCAGCAAGGGGGGAGAACTCGGGG
TTCCAGCAGCTGCAGCTGCAGATGCGGATGGAGTTGTAGAGCCTGCCAAGAGCTTGTCGG
AGAGATTCCCGGCGCTGGTCACCGGATCCTTTTTCATGACATGGTATTTTTCGAATATCG
TCTTCAACATACTCAACAAGAAGGTTTATAATTATTTCCCGTACCCACGCTTTGTTGCTT
TTATCCATCTCCTGGTGGGTGTGATCTACTGTCTTGTCTGTTGGTCTCTTGGCTTACCAA
AACGTGCTCCGATCGATAAGGAGTTCCTGCTGCTCCTCACTCCTGTTGCCTTCTGCCATG
CCCTTGGACATGTTATGACTAATGTATCATTTGCATCTGTGGCTGTGTCATTCACACACA
CTATCAAAGCCCTCGAGCCATTCTTCAATGCTGCGGCTTCTCAATTTGTTTTAGGCCACC
AGATTCCCTTCCCCCTCTGGCTGTCATTGGCCCCTGTTGTTTTTGGTGTATCAATGGCAT
CACTCACTGAACTTTCTTTCAACTGGACTGGTTTCATCAGTGCAATGGTTGCAAATTTTG
CTTTTACCTACAGAAGTTTATATTTAAAGAAAGCAATGACAGGGATGGACAGTGCAAATG
TGTGCGCTTATACTGCAATGATCGCCCTTGTGTTTTGCTTCCCACCTGCACTACTTATTG
ATGGGCCTCAGCTGATGCAACATGGGTTCAGGGACGCTATTGCTAAAGTGGGTCTAGCTA
AATTAGTGTCTGATTTATTCTGGGTTGGATTGTTTTTCCATTTGGACAATCAGCTTGCTG
TCAGCACCTTGGAACGGGTTTCGCCGCTCACACATGCAGTTGGAAGTGTGTTGAAGCGAG
TGGTCGTCATTGTGTTGTCTACCATTGTATTTGGTAATAAGATCACGACGCAGACTGCGA
TCGGTACTGCAATAGCCATTACTGGCGTTGCCATCTACTCCCTCATAAGGGCAAATATGG
AGGAAGAAAACCAGAATGCTGCGGCAACTTAAGCATCATAGAACTGGTGGATTTACTCCC
ACGTCTCACAGCCCTGCATAATACCAAAATAAGTAAATAAAGGGGGTCATTGTAAACAGG
ACTTTTTTTTTTTTTTCTTTTGCGTGAAATCAGATGTATAATTTTTTTCTTGTGTCAGAT
TTTTATCATATTCCGAGTTGAGTTGAGTTAATGCCGATTGTTCAAATTTTTGCTTTGACC
AACCCAGAAAGCAATCAGATCCCAACCCAGCAATGAATCAGGACCGGTCCTGTATACTAG
AAATGAATGAAAAAGAATTGACTATTAAAGGAACAAGAAGCACAGGCACAAATTATGCAT
CAGGGCAGAAATCAAAATGAACCTAAAACCCTAGGATGGAAATATTGATTATTATGGATG
CGGCCCTACATCCCTAAAAATTATTGGCGATATTCAAGTGTCTGATTTGGATTAACATTG
CGTCATCCCTTTAGTTTTCCTCAAAAATCGCAAAAAGAATACAAAAACAAGGTGTTAGGA
GGCTACACTCTAGTATTCCTCCAGCTAAGACTCAAAATTGAGTACAATCTGGTAATTTAC
AAACATGGAGGAATATTCAAGGGAAAACCAAGGTTGGCATCGCCAAATGTTGCATGGGAA
TGCCACGATCCAAAGAGAAGAGAAGCAAAAGCAAACCTA