Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_01s0011g00540.t01
CDS Infomation

cds chromosome:12X:1:506835:513187:-1 gene:VIT_01s0011g00540 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGATCCACCGCAACAGAGACCAGAGTCTCCGATGGAAATCCCCATGGATCAGCAGGGC
CGGAGATCCGAAACTCCGCCGCCTCGCCCTCGACCAGCACCAGCAGCAGCCGCAGGCGGA
GATTTCTCTGCGATCATCACCGTGCTTTTCTTCTTCATCCTCATTTTCTCCTTTGTAGCA
TTCCAGTCATCCTCAACATTAACAAACAACTTAACCCTTTTACACCAAGTCCCAGAAGGT
CATGTTGGGATGTATTGGAGAGGAGGTGCTCTTCTAAAAACAATTACAGAGCCAGGTTTC
CATCTAAAGATGCCCTTGGTAACCCAGTTTGAGCCCATTCAAGTGACTCTCCAGACGGAT
CAGGTTAGGGATATTCCATGTGGTACCAAAGGAGGCGTCATGATCAACTTTGAGAAGATA
GAGGTTGTTAACCGGCTTCATAAGGACTATGTGTATGAGACACTGCTAAACTATGGTGTG
CAGTATGACAACACATGGATATATGATAAGATTCACCATGAGATCAATCAGTTTTGCAGT
GCTCATTCCCTTCAACAAGTTTATATTGATATGTTTGATCAGATTGATGAAAAAATGAAA
GATGCTCTTCAAGGTGATTGCACACGTTATGCTCCTGGTATTGAAATCATCAGTGTGCGT
GTCACAAAACCTAGTATCCCGGAGAGTATAAGGCGCAATTTCGAACAGATGGAGCAGGAA
CGCACTAATGTTTTGATTGCCATGGAGAAACAGAAGGTCGCCGAGAAGGAGGCAGAGACA
CGGAAGAAGATGGCTATAACTGAAGCCGAGAAGAATGCCCAGGTTAGCAAGATCCTCATG
CAACAAAAGTTGATGGAGAAAGACAGTTCCAGAATGCAGGAGGAAATTGAGAACCAAATG
TACATGGCTCGAGAAAAGAGCTTGGCAGATGCTAGTTTCTATAGGCTGATGAAAGAAGCA
GAAGCAAACAAGTTGAAGCTTACTCCTGAGTACTTGGAGCTCAGATTCATTGAAGCCATA
GCTAATAATTCCAAAATCTTTTTTGGAAACAAGGTCCCAAATATGGTTTTTGACCAGAGA
CTACTTGGGAACTTCCTCCAAAGTGTAGCCAAAAGGGGGGACACCGAAGCTGAGTTCTAG

Peptide Sequence

PEP ID

VIT_01s0011g00540.t01
PEP Infomation

pep chromosome:12X:1:506835:513187:-1 gene:VIT_01s0011g00540 transcript:VIT_01s0011g00540.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MDPPQQRPESPMEIPMDQQGRRSETPPPRPRPAPAAAAGGDFSAIITVLFFFILIFSFVA
FQSSSTLTNNLTLLHQVPEGHVGMYWRGGALLKTITEPGFHLKMPLVTQFEPIQVTLQTD
QVRDIPCGTKGGVMINFEKIEVVNRLHKDYVYETLLNYGVQYDNTWIYDKIHHEINQFCS
AHSLQQVYIDMFDQIDEKMKDALQGDCTRYAPGIEIISVRVTKPSIPESIRRNFEQMEQE
RTNVLIAMEKQKVAEKEAETRKKMAITEAEKNAQVSKILMQQKLMEKDSSRMQEEIENQM
YMAREKSLADASFYRLMKEAEANKLKLTPEYLELRFIEAIANNSKIFFGNKVPNMVFDQR
LLGNFLQSVAKRGDTEAEF

Transcript Sequence

Transcript ID

VIT_01s0011g00540.t01
Transcript Infomation

cdna chromosome:12X:1:506835:513187:-1 gene:VIT_01s0011g00540 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TATTCTTTGCTTACCTGCTGCGAAACCAATAGAAGGAAGAAGAGAAAGGGCTGAGAAGTT
CGACAACTAATCTTCACGCTTTCCGAAACAGCACTCAGTTGACGGAGTGAAAAGCCATGG
ATCCACCGCAACAGAGACCAGAGTCTCCGATGGAAATCCCCATGGATCAGCAGGGCCGGA
GATCCGAAACTCCGCCGCCTCGCCCTCGACCAGCACCAGCAGCAGCCGCAGGCGGAGATT
TCTCTGCGATCATCACCGTGCTTTTCTTCTTCATCCTCATTTTCTCCTTTGTAGCATTCC
AGTCATCCTCAACATTAACAAACAACTTAACCCTTTTACACCAAGTCCCAGAAGGTCATG
TTGGGATGTATTGGAGAGGAGGTGCTCTTCTAAAAACAATTACAGAGCCAGGTTTCCATC
TAAAGATGCCCTTGGTAACCCAGTTTGAGCCCATTCAAGTGACTCTCCAGACGGATCAGG
TTAGGGATATTCCATGTGGTACCAAAGGAGGCGTCATGATCAACTTTGAGAAGATAGAGG
TTGTTAACCGGCTTCATAAGGACTATGTGTATGAGACACTGCTAAACTATGGTGTGCAGT
ATGACAACACATGGATATATGATAAGATTCACCATGAGATCAATCAGTTTTGCAGTGCTC
ATTCCCTTCAACAAGTTTATATTGATATGTTTGATCAGATTGATGAAAAAATGAAAGATG
CTCTTCAAGGTGATTGCACACGTTATGCTCCTGGTATTGAAATCATCAGTGTGCGTGTCA
CAAAACCTAGTATCCCGGAGAGTATAAGGCGCAATTTCGAACAGATGGAGCAGGAACGCA
CTAATGTTTTGATTGCCATGGAGAAACAGAAGGTCGCCGAGAAGGAGGCAGAGACACGGA
AGAAGATGGCTATAACTGAAGCCGAGAAGAATGCCCAGGTTAGCAAGATCCTCATGCAAC
AAAAGTTGATGGAGAAAGACAGTTCCAGAATGCAGGAGGAAATTGAGAACCAAATGTACA
TGGCTCGAGAAAAGAGCTTGGCAGATGCTAGTTTCTATAGGCTGATGAAAGAAGCAGAAG
CAAACAAGTTGAAGCTTACTCCTGAGTACTTGGAGCTCAGATTCATTGAAGCCATAGCTA
ATAATTCCAAAATCTTTTTTGGAAACAAGGTCCCAAATATGGTTTTTGACCAGAGACTAC
TTGGGAACTTCCTCCAAAGTGTAGCCAAAAGGGGGGACACCGAAGCTGAGTTCTAGGCTA
CACCAACTCTGTTACTATATAATAATGATGAGAACCATATGCAATTTGAAAATCCAAGGG
GATTTATGATCATATAGTCCAAATCATTTCAGTGATTCAGCTCATATTGGTAGTCACCTG
TAGTCATGTGATGAACAATCCTGCAGTTGCTGTGGAGAGCATCATCTAAAGCCATAGAGA
AAACAAGTGTTTTTCCAGTTCATATTTTCCCAGGTATCTGTTCCCTTTCTTCTCCTGTTC
TCCCCCAAAAGTTGTAATAAGGAAATACTAGTTTTTTTCTTTTCCTTGTGAAAAGGCATC
GGGTACAATGGTTGTTTGAGCAGGTTGTGGTGGCAACCGTGACTGTAAATGGGGTGTGTT
TCCTGTTCCATGGGGCTGAAAATTATGTTCACGTTGTCCATGGTCCTTTCTTCTGGCTAC
TTTTTGGACTTGGATAATCAGATTCGTATATGCCAAATTAATATTTCCGTTCCCCTC