Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_01s0011g00480.t01
CDS Infomation

cds chromosome:12X:1_random:466951:492640:1 gene:VIT_01s0011g00480 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGATGATGGCATCTCCCGCAACAACAACAACAGCAACCAAATTCTTTGCCCAATCAAA
CCGATTCGGTGCATCGTTAAGCTTGGAGGTGCAGCAATTACCTGCAAAAATGAAATAGAG
AAGATGAATGAAGAAAGTATTGAGAAAGTTTCATCACAGCTGAGACAGGCAATGATTTCA
GGGCTTTCTTCTCTGAAGATTTGTGGGATGGATTGGAGCAAGCGACCTGGAAACTCTGAA
GCTTCACCTACTGTGGATGATTTTAGTGATCAATCATTGTTGGACTCTGACAGATTTATT
GTTGTTCATGGAGCAGGTTCTTTTGGGCACTTTCAGGCTAGCAAATCTGGAGTTCATAAA
GGAGGATTGAACCAACCTCTTGTCAAGGCTGGGTTTGTTGCTACACGCATTTCTGTTACA
ACACTCAATCTTGAAATTGTTAGAGCACTGGCTAGAGAGGGTATTCCTTCAATTGGGATG
TCTCCATTTTCATGTGGATGGTTGACTTCTGAAAGAAATGTAGCCTCAGCTGATGTGTCC
ATGGTGGCAAAGGCTATTGACTCAGGTTTTGTACCTGTTCTGCATGGAGATGCGGTCCTA
GATGAAGCTCAGGACTGCACCATATTGAGTGGAGATGTAATCATTCGTCATCTTGCAGCA
CAACTAAAGCCTGAATATGTTGTTTTTCTTACAGATGTTCTTGGGGTATATGACCGTCCG
CCAACAGAACCTAATGCAGTACTTTTAAAGGAAATTGCTGTGAGCGAAGATGGGAGCTGG
TCTGTAGTTAAACCAACACTGAAGGAGATGAATAAGCAAGTTGAGATAACCGTAGCAGCC
CATGATACAACTGGAGGAATGGTAACCAAGATATGGGAAGCTGCAATGATTGCTAAACTT
GGAATTGATGTCTACATTGTGAAGGCAGCCACAGACGACTCTCTTAGGGCCCTGAGAGGG
GAACTTAAAGGCAACAACGTTCCTGAGGAGTGGCTGGGGACTGTCATCAGATTGTTGAGA
TAG

Peptide Sequence

PEP ID

VIT_01s0011g00480.t01
PEP Infomation

pep chromosome:12X:1_random:466951:492640:1 gene:VIT_01s0011g00480 transcript:VIT_01s0011g00480.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MDDGISRNNNNSNQILCPIKPIRCIVKLGGAAITCKNEIEKMNEESIEKVSSQLRQAMIS
GLSSLKICGMDWSKRPGNSEASPTVDDFSDQSLLDSDRFIVVHGAGSFGHFQASKSGVHK
GGLNQPLVKAGFVATRISVTTLNLEIVRALAREGIPSIGMSPFSCGWLTSERNVASADVS
MVAKAIDSGFVPVLHGDAVLDEAQDCTILSGDVIIRHLAAQLKPEYVVFLTDVLGVYDRP
PTEPNAVLLKEIAVSEDGSWSVVKPTLKEMNKQVEITVAAHDTTGGMVTKIWEAAMIAKL
GIDVYIVKAATDDSLRALRGELKGNNVPEEWLGTVIRLLR

Transcript Sequence

Transcript ID

VIT_01s0011g00480.t01
Transcript Infomation

cdna chromosome:12X:1_random:466951:492640:1 gene:VIT_01s0011g00480 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AGAGAAATACATCCAGAAGCCTGGAGAAGCTGCGGTGGTTTGAGGTGGGTTTTTAGTTAT
ATTATAAAGCGCTGTTCTCAGCCTCCAAGGACTAAGCATCTGAGAAAGCCAGAAAGCTCG
AAAAATGGATGATGGCATCTCCCGCAACAACAACAACAGCAACCAAATTCTTTGCCCAAT
CAAACCGATTCGGTGCATCGTTAAGCTTGGAGGTGCAGCAATTACCTGCAAAAATGAAAT
AGAGAAGATGAATGAAGAAAGTATTGAGAAAGTTTCATCACAGCTGAGACAGGCAATGAT
TTCAGGGCTTTCTTCTCTGAAGATTTGTGGGATGGATTGGAGCAAGCGACCTGGAAACTC
TGAAGCTTCACCTACTGTGGATGATTTTAGTGATCAATCATTGTTGGACTCTGACAGATT
TATTGTTGTTCATGGAGCAGGTTCTTTTGGGCACTTTCAGGCTAGCAAATCTGGAGTTCA
TAAAGGAGGATTGAACCAACCTCTTGTCAAGGCTGGGTTTGTTGCTACACGCATTTCTGT
TACAACACTCAATCTTGAAATTGTTAGAGCACTGGCTAGAGAGGGTATTCCTTCAATTGG
GATGTCTCCATTTTCATGTGGATGGTTGACTTCTGAAAGAAATGTAGCCTCAGCTGATGT
GTCCATGGTGGCAAAGGCTATTGACTCAGGTTTTGTACCTGTTCTGCATGGAGATGCGGT
CCTAGATGAAGCTCAGGACTGCACCATATTGAGTGGAGATGTAATCATTCGTCATCTTGC
AGCACAACTAAAGCCTGAATATGTTGTTTTTCTTACAGATGTTCTTGGGGTATATGACCG
TCCGCCAACAGAACCTAATGCAGTACTTTTAAAGGAAATTGCTGTGAGCGAAGATGGGAG
CTGGTCTGTAGTTAAACCAACACTGAAGGAGATGAATAAGCAAGTTGAGATAACCGTAGC
AGCCCATGATACAACTGGAGGAATGGTAACCAAGATATGGGAAGCTGCAATGATTGCTAA
ACTTGGAATTGATGTCTACATTGTGAAGGCAGCCACAGACGACTCTCTTAGGGCCCTGAG
AGGGGAACTTAAAGGCAACAACGTTCCTGAGGAGTGGCTGGGGACTGTCATCAGATTGTT
GAGATAGAAAATCTGGCCG