Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_01s0011g00270.t01
CDS Infomation

cds chromosome:12X:1_random:315715:320272:-1 gene:VIT_01s0011g00270 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCGGTTTCTGGAGATTTGAGGGTCGTTGCAACATTGAGCTCTTATCCTACGCATCCT
CTTCGAAGCTCTTTACTCTCTTCAAAGGTTGGATTTGCCGGTGCATTGAATGGAGAATCT
AGTATCCCTGATATCACACCTAGATGGCCTAGCTTAGTACTTAATGGCCATCCCGTGCAC
TGTCATTCAAAAAGAATTTTTGGGATCATGGGTGATAATAAGCTATCTCCAAGATCGATT
AGCCAAGAAGCGGAGAGTCTCCTCCTAAATGCTATAAATATGAACTTCCTTGAGCGTTTA
AACTTGGCTTGGAAGATTATATTCCCACCACAAAAAACAAGACACTCTAATGCAAGGATT
GCGAAGCAGCGCCTGCAGATGATTCTCTTCTCCGACCGCTGTGCAGTTAGTGATGAGGCA
AAACAGAAGATTGTCAACAACATTGTGCATGCTCTGTCAGATTTTGTGGAGATAGAATCA
CAGGATAAAGTCCAGCTGAGTGTTTCAACGGACCCAAATCTTGGGACTGTTTACTCTGTC
ACGGTGCCAGTACGGCGGGTGAAGCCAGAGTACCAAGCTGTAGATGAGATGGGAACAATA
GCAAACATCGAGTACAAAGATAATGGAGATAGTTCTGGTTCTGTTGATGTCAGGTTTGAT
TTCGTCATCCCAAGTTAG

Peptide Sequence

PEP ID

VIT_01s0011g00270.t01
PEP Infomation

pep chromosome:12X:1_random:315715:320272:-1 gene:VIT_01s0011g00270 transcript:VIT_01s0011g00270.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAVSGDLRVVATLSSYPTHPLRSSLLSSKVGFAGALNGESSIPDITPRWPSLVLNGHPVH
CHSKRIFGIMGDNKLSPRSISQEAESLLLNAINMNFLERLNLAWKIIFPPQKTRHSNARI
AKQRLQMILFSDRCAVSDEAKQKIVNNIVHALSDFVEIESQDKVQLSVSTDPNLGTVYSV
TVPVRRVKPEYQAVDEMGTIANIEYKDNGDSSGSVDVRFDFVIPS

Transcript Sequence

Transcript ID

VIT_01s0011g00270.t01
Transcript Infomation

cdna chromosome:12X:1_random:315715:320272:-1 gene:VIT_01s0011g00270 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AAGCCGTGAGAGAGAGGCAGTGGATGCTGAAGATTTGAGGGGAGAAAAATGGCGGTTTCT
GGAGATTTGAGGGTCGTTGCAACATTGAGCTCTTATCCTACGCATCCTCTTCGAAGCTCT
TTACTCTCTTCAAAGGTTGGATTTGCCGGTGCATTGAATGGAGAATCTAGTATCCCTGAT
ATCACACCTAGATGGCCTAGCTTAGTACTTAATGGCCATCCCGTGCACTGTCATTCAAAA
AGAATTTTTGGGATCATGGGTGATAATAAGCTATCTCCAAGATCGATTAGCCAAGAAGCG
GAGAGTCTCCTCCTAAATGCTATAAATATGAACTTCCTTGAGCGTTTAAACTTGGCTTGG
AAGATTATATTCCCACCACAAAAAACAAGACACTCTAATGCAAGGATTGCGAAGCAGCGC
CTGCAGATGATTCTCTTCTCCGACCGCTGTGCAGTTAGTGATGAGGCAAAACAGAAGATT
GTCAACAACATTGTGCATGCTCTGTCAGATTTTGTGGAGATAGAATCACAGGATAAAGTC
CAGCTGAGTGTTTCAACGGACCCAAATCTTGGGACTGTTTACTCTGTCACGGTGCCAGTA
CGGCGGGTGAAGCCAGAGTACCAAGCTGTAGATGAGATGGGAACAATAGCAAACATCGAG
TACAAAGATAATGGAGATAGTTCTGGTTCTGTTGATGTCAGGTTTGATTTCGTCATCCCA
AGTTAGAATTCTTGGCAATGACTGAAGCAAAAAGCTGGGGACAAGATTGGCCGGTTGCAA
AAGTTTATTGTTTTAAATTTTCAAGTTTTTAGCCTGTTGGCCAACCTTACATTTCTGTAT
ATATATATTTGCAATTTCCCGTGAGGAAATTGAAGAGTTTGTTGCTTTTGAAATTTCTAG
TATGGTGGGTTGA