Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_01s0011g00220.t01
CDS Infomation

cds chromosome:12X:1_random:297588:311938:1 gene:VIT_01s0011g00220 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGACTAAAAACGATGAAACGTCACTATCATCATCGGCATCAGCATCGAGAGCTTCTGCT
CCTCTACGGCCTACTATAACGCTGCCCCCTCGTTCCTCCATGGAAACTCTCTTTCCTGGA
GGTCCCGGCTTCAGTCCCGGTCCCATGACTCTCGTCTCTAATTTTTTCTCCGACAACGAC
CCCGACTCCGACTGCCGCTCCTTCTCTCAGCTGCTCGCCGGCGCTATGGCCTCGCCCGCA
GCTTTTCCCGGCCCCAGGCCCAGTTTTTCCACCGACCCTCAGGTCTCCGCTTCTTCCAAG
GAAGACAGGACTTCCGTTGATGCCGCTGGTGATTTTGAATTTCGGTTCAAGCAGAACCGG
CCCTCCGGTTTGGTGATTGCTCAGTCCCCGTTGTTTACAGTTCCTCCCGGGTTAAGCCCG
ACCTGTTTGCTCGATTCCCCAGGTTTCTTTTCGCAGGGACCATTTGTAATGTCCCATCAG
CAGGCCTTAGCTCAGGTTACCGCTCAGGCTGCACAAGCCCATTCCCATATGCAACTCCAA
GCCAAATTTCCGTCTTCTTTATCAGTGGCACCCGCTGCATCATTGACACAGTTTCCATCC
TTTGCTAGCAACACAAAAGCACATGAGCAGATGCCACCCTTAGTATCAGATACTAGAACT
GCTGTGAAGGAATCATCTGGTTTATCTCAATCTGATCAGAGATCCCAACCTTCTTCATTT
ACAGTTGATAAGCCTGCTGATGATGGCTACAATTGGCGGAAATATGGGCAGAAGCAAGTG
AAGGGAAGTGAATATCCTCGAAGCTATTACAAATGTACACATCCAAGTTGTCCTGTTAAA
AAAAAGGTTGAACGTTCTCTTGATGGCCAAGTAACAGAGATTATTTATAAGGGCCAGCAC
AACCATCAAGCACCACTACCCAACAAGCGTGCAAAAGATACAGGAAATCCTAATGGAAAT
TCAAATTTTCAGGAGAATCCTGAATTAGCCTCCCAAAACCAGACTGGAAACTTGAACAAA
CCGAAAGAAGGGTTACCTGCATATTCACTGTCCAAGAAGGATCAAGAATCTAGTCAAGCC
ATACCTGAACACTTACCTGGATCAAGTGACAGTGAGGAAATGGATGATGCTGAGACTAGA
GGTGATGAAAAGGGTGAAGATGAACCTGACCCCAAAAGAAGGAATACAGAGGTCAGGGTT
TCAGATCAGGTTTCCTCCCATAGAACAGTCACAGAACCTAGGATTATTGTGCAGACAACC
AGTGAAGTTGATCTCTTGGATGATGGCTATAGGTGGCGCAAGTATGGGCAGAAAGTTGTC
AAAGGAAATCCTTATCCAAGGAGCTACTATAAATGCACAAATCCAGGATGCAATGTCCGT
AAGCATGTTGAGAGGGCAGCAACAGACCCGAAAGCCGTCATAACAACATATGAAGGTAAA
CATAATCATGATGTGCCAGCAGCTAAAAGTAGTAGCCACAACACAGCCAACAGCATTGCA
TCACAATAA

Peptide Sequence

PEP ID

VIT_01s0011g00220.t01
PEP Infomation

pep chromosome:12X:1_random:297588:311938:1 gene:VIT_01s0011g00220 transcript:VIT_01s0011g00220.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MTKNDETSLSSSASASRASAPLRPTITLPPRSSMETLFPGGPGFSPGPMTLVSNFFSDND
PDSDCRSFSQLLAGAMASPAAFPGPRPSFSTDPQVSASSKEDRTSVDAAGDFEFRFKQNR
PSGLVIAQSPLFTVPPGLSPTCLLDSPGFFSQGPFVMSHQQALAQVTAQAAQAHSHMQLQ
AKFPSSLSVAPAASLTQFPSFASNTKAHEQMPPLVSDTRTAVKESSGLSQSDQRSQPSSF
TVDKPADDGYNWRKYGQKQVKGSEYPRSYYKCTHPSCPVKKKVERSLDGQVTEIIYKGQH
NHQAPLPNKRAKDTGNPNGNSNFQENPELASQNQTGNLNKPKEGLPAYSLSKKDQESSQA
IPEHLPGSSDSEEMDDAETRGDEKGEDEPDPKRRNTEVRVSDQVSSHRTVTEPRIIVQTT
SEVDLLDDGYRWRKYGQKVVKGNPYPRSYYKCTNPGCNVRKHVERAATDPKAVITTYEGK
HNHDVPAAKSSSHNTANSIASQ

Transcript Sequence

Transcript ID

VIT_01s0011g00220.t01
Transcript Infomation

cdna chromosome:12X:1_random:297588:311938:1 gene:VIT_01s0011g00220 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AATGATAGAGAAGCTGGAAGCCCGGAACAAAGAAGAAGAAGGTTGAAAGAGTGAACAAAA
AAAATTAAGTCAATGACTAAAAACGATGAAACGTCACTATCATCATCGGCATCAGCATCG
AGAGCTTCTGCTCCTCTACGGCCTACTATAACGCTGCCCCCTCGTTCCTCCATGGAAACT
CTCTTTCCTGGAGGTCCCGGCTTCAGTCCCGGTCCCATGACTCTCGTCTCTAATTTTTTC
TCCGACAACGACCCCGACTCCGACTGCCGCTCCTTCTCTCAGCTGCTCGCCGGCGCTATG
GCCTCGCCCGCAGCTTTTCCCGGCCCCAGGCCCAGTTTTTCCACCGACCCTCAGGTCTCC
GCTTCTTCCAAGGAAGACAGGACTTCCGTTGATGCCGCTGGTGATTTTGAATTTCGGTTC
AAGCAGAACCGGCCCTCCGGTTTGGTGATTGCTCAGTCCCCGTTGTTTACAGTTCCTCCC
GGGTTAAGCCCGACCTGTTTGCTCGATTCCCCAGGTTTCTTTTCGCAGGGACCATTTGTA
ATGTCCCATCAGCAGGCCTTAGCTCAGGTTACCGCTCAGGCTGCACAAGCCCATTCCCAT
ATGCAACTCCAAGCCAAATTTCCGTCTTCTTTATCAGTGGCACCCGCTGCATCATTGACA
CAGTTTCCATCCTTTGCTAGCAACACAAAAGCACATGAGCAGATGCCACCCTTAGTATCA
GATACTAGAACTGCTGTGAAGGAATCATCTGGTTTATCTCAATCTGATCAGAGATCCCAA
CCTTCTTCATTTACAGTTGATAAGCCTGCTGATGATGGCTACAATTGGCGGAAATATGGG
CAGAAGCAAGTGAAGGGAAGTGAATATCCTCGAAGCTATTACAAATGTACACATCCAAGT
TGTCCTGTTAAAAAAAAGGTTGAACGTTCTCTTGATGGCCAAGTAACAGAGATTATTTAT
AAGGGCCAGCACAACCATCAAGCACCACTACCCAACAAGCGTGCAAAAGATACAGGAAAT
CCTAATGGAAATTCAAATTTTCAGGAGAATCCTGAATTAGCCTCCCAAAACCAGACTGGA
AACTTGAACAAACCGAAAGAAGGGTTACCTGCATATTCACTGTCCAAGAAGGATCAAGAA
TCTAGTCAAGCCATACCTGAACACTTACCTGGATCAAGTGACAGTGAGGAAATGGATGAT
GCTGAGACTAGAGGTGATGAAAAGGGTGAAGATGAACCTGACCCCAAAAGAAGGAATACA
GAGGTCAGGGTTTCAGATCAGGTTTCCTCCCATAGAACAGTCACAGAACCTAGGATTATT
GTGCAGACAACCAGTGAAGTTGATCTCTTGGATGATGGCTATAGGTGGCGCAAGTATGGG
CAGAAAGTTGTCAAAGGAAATCCTTATCCAAGGAGCTACTATAAATGCACAAATCCAGGA
TGCAATGTCCGTAAGCATGTTGAGAGGGCAGCAACAGACCCGAAAGCCGTCATAACAACA
TATGAAGGTAAACATAATCATGATGTGCCAGCAGCTAAAAGTAGTAGCCACAACACAGCC
AACAGCATTGCATCACAATAACCACAGAACGTGGTGGACAAGAAGCGGGCCTTTATTGAC
AATAATGATCAATGTCCCATAGGACGATTACAGTTAAAAGAAGAGCAGATAATGTAATCT
CTTGGAGATGCAAACTTGAAAAGAGACAAGGCGATGTAGAATATCCAAAGAAATGCCGCA
AGTGAATCTGGTGGAAATGCAAGTTATCTTTGGTTGAATCTGTTTTTCATACCTGGGGGC
CATAGTTTTTATGAAGGCTTGTTCCCCAGCTGGTAAAACACAAACAAAAGAGGAAACATA
AAAAGGCAGAATGATAGAGAGAATTAAATTGAAACCTAAAATGCTGTCAGAAATAGATCT
TCAGGAATTGAATTGAACAGTAATTATTGTTATATGTAAACTGGTTTATTGGGGGCAAAT
TGTATTTGAC