Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_01s0010g03720.t01
CDS Infomation

cds chromosome:12X:1:21076452:21078724:-1 gene:VIT_01s0010g03720 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGAACTCACCTCCAAGCTTCTGCTCAAGATAATGAGCACATTTTCAGGAGCCAGCAT
CAAGCAGTTCCAGTGCCAGATAACATGACACTGCCGGACTTTGTGCTTCAGGATGCTGAA
TTGTATGCTGAAAAGGTGGCATTTGTGGAGGCTGTGACAGGGAAGGAGTATACTTATGGT
GAAGTTGTCAGAGATGTAAGGAGGTTTGCTAAGGCCTTGAGGTCAATTGGGCTGAGGAAG
GGGAGAGTGGTGGTTGTTGTACTGCCAAATGTGGCTGAGTACGCCATCGTCGCGCTGGGA
ATAATGGCCGCTGGCGGCGTGTTTTCAGGCGCAAACCCAGCTGGGCATGCTTCAGAGATT
AAGAAGCAGGTGGAGGCTGCTGATGCCAAGCTTGTTGTCACAAATGGGGCCATGTATGAG
AAGGTGAAAAGCCTGGAGCTACCAGTAATTGTGATGGGGGAAGAACATGTTGCAGGCGCC
ATAAACTGGGGTGAGCTGCTTGAAGCAGCAGACCGGGCAAACACCGATACAATCAGCGAG
GATGTGCACCAGAATGATCTATGTGCCCTCCCATTCTCATCAGGGACTACAGGAATTTCA
AAGGGAGTAATGCTCACTCACCGGAATCTGGTAGCTAACCTCTGCTCCACCCTCTTCAGT
GTTGGGCCAGAGATGGTGGGACAAATCACTATTCTAGGCCTAATGCCATTCTTTCACATA
TATGGAATCACTGGAATATGCTGTGCCACACTTAGGAACAAGGGGAAGGTAGTGGTGATT
GGGAGGTATGAGCTTAGAACTTTTCTGAATGCATTGATCACACATGAGATCACATTTGCC
CCAATTGTGCCGCCAATCATTTTGGCATTGGTTAAGAATCCGATCGTGGAGGAGTTTGAT
CTCAGCAGGCTCAAGCTTAGGGCAGTCATGACTGCTGCAGCTCCCCTGGCACCTGAGCTC
CTCTCTGCCTTTGAGAAGAAGTTCCCTAGTGTCCAAGTCCAAGAGGCATATGGACTGACT
GAGCACAGCTGCATTACACTTACTCATGGAGACCCCACTAAAGGCCATGCCACTGCTAAG
AAAAACTCAGTTGGGTTCATCCTTCCCAACATGGAGCTCAAGTTCATCGATCCTGAAACC
GGTATCTCCCTCCCCAAGAACACCCCTGGTGAAATCTGTGTTAGAAGCCAATGTGTAATG
CAAGGCTACTATAAGAACGAGGAGGAGACAGCTCGAACAATTGACAACAATGGATGGCTC
CATACTGGCGACATTGGCTACATAGACGATGATGGGGACGTCTTTGTGGTTGATCGCATC
AAAGAGTTGATCAAGTACAAAGGCTTCCAAGTAGCTCCTGCTGAGCTAGAGGCCATCCTT
CTAAGTCACCCTTCAGTTGAAGACACTGCTGTTGTATCACTGCCTGATGAAGAGGCAGGG
GAGATTCCAGCAGCATGTGTAGTGCTCAACCCAGAAGCAAAAGAGACAGAGGAAGAAATT
GTGAAGTATGTTGCCTCTAATGTGGCACAGTATAAGAGAGTGAGGGTGGTGCACTTTGTG
GAGACTATCCCAAAATCACCATCTGGGAAAATTATGAGAAGGCTTCTTAGAGAAAAGATG
CTAGAAAAAATGAAGAACAACACCAAATCTGGTGCTATATTACCCTAA

Peptide Sequence

PEP ID

VIT_01s0010g03720.t01
PEP Infomation

pep chromosome:12X:1:21076452:21078724:-1 gene:VIT_01s0010g03720 transcript:VIT_01s0010g03720.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MGTHLQASAQDNEHIFRSQHQAVPVPDNMTLPDFVLQDAELYAEKVAFVEAVTGKEYTYG
EVVRDVRRFAKALRSIGLRKGRVVVVVLPNVAEYAIVALGIMAAGGVFSGANPAGHASEI
KKQVEAADAKLVVTNGAMYEKVKSLELPVIVMGEEHVAGAINWGELLEAADRANTDTISE
DVHQNDLCALPFSSGTTGISKGVMLTHRNLVANLCSTLFSVGPEMVGQITILGLMPFFHI
YGITGICCATLRNKGKVVVIGRYELRTFLNALITHEITFAPIVPPIILALVKNPIVEEFD
LSRLKLRAVMTAAAPLAPELLSAFEKKFPSVQVQEAYGLTEHSCITLTHGDPTKGHATAK
KNSVGFILPNMELKFIDPETGISLPKNTPGEICVRSQCVMQGYYKNEEETARTIDNNGWL
HTGDIGYIDDDGDVFVVDRIKELIKYKGFQVAPAELEAILLSHPSVEDTAVVSLPDEEAG
EIPAACVVLNPEAKETEEEIVKYVASNVAQYKRVRVVHFVETIPKSPSGKIMRRLLREKM
LEKMKNNTKSGAILP

Transcript Sequence

Transcript ID

VIT_01s0010g03720.t01
Transcript Infomation

cdna chromosome:12X:1:21076452:21078724:-1 gene:VIT_01s0010g03720 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGAACTCACCTCCAAGCTTCTGCTCAAGATAATGAGCACATTTTCAGGAGCCAGCAT
CAAGCAGTTCCAGTGCCAGATAACATGACACTGCCGGACTTTGTGCTTCAGGATGCTGAA
TTGTATGCTGAAAAGGTGGCATTTGTGGAGGCTGTGACAGGGAAGGAGTATACTTATGGT
GAAGTTGTCAGAGATGTAAGGAGGTTTGCTAAGGCCTTGAGGTCAATTGGGCTGAGGAAG
GGGAGAGTGGTGGTTGTTGTACTGCCAAATGTGGCTGAGTACGCCATCGTCGCGCTGGGA
ATAATGGCCGCTGGCGGCGTGTTTTCAGGCGCAAACCCAGCTGGGCATGCTTCAGAGATT
AAGAAGCAGGTGGAGGCTGCTGATGCCAAGCTTGTTGTCACAAATGGGGCCATGTATGAG
AAGGTGAAAAGCCTGGAGCTACCAGTAATTGTGATGGGGGAAGAACATGTTGCAGGCGCC
ATAAACTGGGGTGAGCTGCTTGAAGCAGCAGACCGGGCAAACACCGATACAATCAGCGAG
GATGTGCACCAGAATGATCTATGTGCCCTCCCATTCTCATCAGGGACTACAGGAATTTCA
AAGGGAGTAATGCTCACTCACCGGAATCTGGTAGCTAACCTCTGCTCCACCCTCTTCAGT
GTTGGGCCAGAGATGGTGGGACAAATCACTATTCTAGGCCTAATGCCATTCTTTCACATA
TATGGAATCACTGGAATATGCTGTGCCACACTTAGGAACAAGGGGAAGGTAGTGGTGATT
GGGAGGTATGAGCTTAGAACTTTTCTGAATGCATTGATCACACATGAGATCACATTTGCC
CCAATTGTGCCGCCAATCATTTTGGCATTGGTTAAGAATCCGATCGTGGAGGAGTTTGAT
CTCAGCAGGCTCAAGCTTAGGGCAGTCATGACTGCTGCAGCTCCCCTGGCACCTGAGCTC
CTCTCTGCCTTTGAGAAGAAGTTCCCTAGTGTCCAAGTCCAAGAGGCATATGGACTGACT
GAGCACAGCTGCATTACACTTACTCATGGAGACCCCACTAAAGGCCATGCCACTGCTAAG
AAAAACTCAGTTGGGTTCATCCTTCCCAACATGGAGCTCAAGTTCATCGATCCTGAAACC
GGTATCTCCCTCCCCAAGAACACCCCTGGTGAAATCTGTGTTAGAAGCCAATGTGTAATG
CAAGGCTACTATAAGAACGAGGAGGAGACAGCTCGAACAATTGACAACAATGGATGGCTC
CATACTGGCGACATTGGCTACATAGACGATGATGGGGACGTCTTTGTGGTTGATCGCATC
AAAGAGTTGATCAAGTACAAAGGCTTCCAAGTAGCTCCTGCTGAGCTAGAGGCCATCCTT
CTAAGTCACCCTTCAGTTGAAGACACTGCTGTTGTATCACTGCCTGATGAAGAGGCAGGG
GAGATTCCAGCAGCATGTGTAGTGCTCAACCCAGAAGCAAAAGAGACAGAGGAAGAAATT
GTGAAGTATGTTGCCTCTAATGTGGCACAGTATAAGAGAGTGAGGGTGGTGCACTTTGTG
GAGACTATCCCAAAATCACCATCTGGGAAAATTATGAGAAGGCTTCTTAGAGAAAAGATG
CTAGAAAAAATGAAGAACAACACCAAATCTGGTGCTATATTACCCTAA