Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_01s0010g03710.t01
CDS Infomation

cds chromosome:12X:1:21064260:21071687:-1 gene:VIT_01s0010g03710 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGATTTCTTTCTCAATGATGGAGTGGAATGCAAAAGCTCCCGTACAGTGGGACTGGGAG
AACCTTGACATTTTCAATGCAAAATCAACTGAAATTCCAAAAAAGTTACAATCAGACTGG
GAAATTGAAGGAGAAGGAGGAATTGACACTGGTTCTTTCTATTCATCTGGATGTGGTGCT
GGTAGTGGTGGTTCTGGCTCTGATTTGGGACATGCATATTCATCAAAGAGCTCAAAATCA
GCTTCAATTGATTCTTCATCAAAGGTGGGAATAAAGACATCCAACTTCACTTTTGAGGCT
TTCCAAGATTTTTCTCAAGATTTTAACAAGAAGAGAGATTTGGAGAGGGCTGAGCCAACT
GGAAGTTCTCCAAACCTTGAAGCCTCGATTGGCTCTGGTGAACCTTTAATTGGTCTAAAG
CTTGGTAAAAGGACATACTTCGAGGATGTTTCTGCAGGGGCCAATGCTAAGGGCTCAGTG
TTTTCTGTGATTCCCATATCATCTGATACCACAGCAAAGAGATCCAGGTTATCTTGTCAG
AATGCACATGTCTCGCGCTGTCAAGTTGAAGGATGCAACCTTGACCTTTCAACAGCCAAA
GATTACCATCGCAAACATAGAGTTTGTGAAAGTCATACCAAATGCCCAAAGGTCATTGTA
GGTGGTCTGGAGCGCCGTTTTTGCCAACAGTGTAGCAGGTTCCATAGTTTGTCAGAGTTT
GATGAAAAAAAGAGAAGCTGTCGCAGGCGTCTTTCTGATCACAATGCACGCCGGCGCAAA
CCACAACCAGAAGGGATCCAGTCAAATTCGGCAAGGCTTTCATCATTCTATGGTGGGAAG
CAGCAAATGAGTCTTGTGTTGAGCTCGGTCCCCATTGTTCATACAAGGCCTGCTGTAAAT
CCTTCATGGGAAGGCACATGCAGCAAGTTCACACAAACAAAAGGGTTAGTAAGGCCTGGT
AACACAGGAGGTATCGACCGGCAGCTGCATTTGCCTGGCAGTGAACTGCAGAATGGCATT
AGTACGCTTTGTCATGATTCCAGTAGGCTTTTGCACTCTAAGGGTGCAATAGCTGAGGTT
CTCAATCAAGGTCTAGGGGATTCTATGATCTCTTCCAACTTGGACACATCACAGGATCTT
CGTCGTGCTCTCTCTCTTCTGTCAACGAATTCTTGGGGCTCATGTGAAACACAACCAATT
CCATCTGACCACCCTATGCATGTAAACCAAACCAGCATGCCTCAATCTATTATGCATGCA
GTGTCCCAAGGTATGTTACATTCAACCTCAGAACACTGGAGGACCGAGCTTCCCTCAACT
GATTCCCGGGTGCATATCTTGCCTTCACAAGGTGATGGTAACACCCACTTTCAAGAGTTC
AAGCTGTTCAAAGCGCCATACGAGTCTGGCTTTTCTTCTGGTCAGTTGAACTGA

Peptide Sequence

PEP ID

VIT_01s0010g03710.t01
PEP Infomation

pep chromosome:12X:1:21064260:21071687:-1 gene:VIT_01s0010g03710 transcript:VIT_01s0010g03710.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MISFSMMEWNAKAPVQWDWENLDIFNAKSTEIPKKLQSDWEIEGEGGIDTGSFYSSGCGA
GSGGSGSDLGHAYSSKSSKSASIDSSSKVGIKTSNFTFEAFQDFSQDFNKKRDLERAEPT
GSSPNLEASIGSGEPLIGLKLGKRTYFEDVSAGANAKGSVFSVIPISSDTTAKRSRLSCQ
NAHVSRCQVEGCNLDLSTAKDYHRKHRVCESHTKCPKVIVGGLERRFCQQCSRFHSLSEF
DEKKRSCRRRLSDHNARRRKPQPEGIQSNSARLSSFYGGKQQMSLVLSSVPIVHTRPAVN
PSWEGTCSKFTQTKGLVRPGNTGGIDRQLHLPGSELQNGISTLCHDSSRLLHSKGAIAEV
LNQGLGDSMISSNLDTSQDLRRALSLLSTNSWGSCETQPIPSDHPMHVNQTSMPQSIMHA
VSQGMLHSTSEHWRTELPSTDSRVHILPSQGDGNTHFQEFKLFKAPYESGFSSGQLN

Transcript Sequence

Transcript ID

VIT_01s0010g03710.t01
Transcript Infomation

cdna chromosome:12X:1:21064260:21071687:-1 gene:VIT_01s0010g03710 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CCACACTCTTCTTCCTTCCGAAACCCATTTCCCCATTTTTCCTCTTTCCCGTAAAAACCA
TTACCCATCTGATTTTTTCCTACTATTTCCCGGAAAAGTCGGTGCCACAATGCGCCACTC
TTTATGATCTTCCAAGTATTAGTGGTATAGGCTTTTTGACTTTGCATCTATTTTGGCTTC
AAATCTTGACTTAGACACAGAGGAATTAGATTGTTACTGTGGAGTTGGGTGGATTTGAGC
AGCATCATCGGTTCTACTTGGTCGACTTGGGGAAGAAAGGACAATCGATATCCTTCTCTA
AAAGGGGATAAGGAATTTCCTTTCTGTGGCATGTTAATCCAGCAGGATCTGCAACTGAAG
TCTATGGAGAAGAGGAGTGTGTGAGATTTATGATTTCTTTCTCAATGATGGAGTGGAATG
CAAAAGCTCCCGTACAGTGGGACTGGGAGAACCTTGACATTTTCAATGCAAAATCAACTG
AAATTCCAAAAAAGTTACAATCAGACTGGGAAATTGAAGGAGAAGGAGGAATTGACACTG
GTTCTTTCTATTCATCTGGATGTGGTGCTGGTAGTGGTGGTTCTGGCTCTGATTTGGGAC
ATGCATATTCATCAAAGAGCTCAAAATCAGCTTCAATTGATTCTTCATCAAAGGTGGGAA
TAAAGACATCCAACTTCACTTTTGAGGCTTTCCAAGATTTTTCTCAAGATTTTAACAAGA
AGAGAGATTTGGAGAGGGCTGAGCCAACTGGAAGTTCTCCAAACCTTGAAGCCTCGATTG
GCTCTGGTGAACCTTTAATTGGTCTAAAGCTTGGTAAAAGGACATACTTCGAGGATGTTT
CTGCAGGGGCCAATGCTAAGGGCTCAGTGTTTTCTGTGATTCCCATATCATCTGATACCA
CAGCAAAGAGATCCAGGTTATCTTGTCAGAATGCACATGTCTCGCGCTGTCAAGTTGAAG
GATGCAACCTTGACCTTTCAACAGCCAAAGATTACCATCGCAAACATAGAGTTTGTGAAA
GTCATACCAAATGCCCAAAGGTCATTGTAGGTGGTCTGGAGCGCCGTTTTTGCCAACAGT
GTAGCAGGTTCCATAGTTTGTCAGAGTTTGATGAAAAAAAGAGAAGCTGTCGCAGGCGTC
TTTCTGATCACAATGCACGCCGGCGCAAACCACAACCAGAAGGGATCCAGTCAAATTCGG
CAAGGCTTTCATCATTCTATGGTGGGAAGCAGCAAATGAGTCTTGTGTTGAGCTCGGTCC
CCATTGTTCATACAAGGCCTGCTGTAAATCCTTCATGGGAAGGCACATGCAGCAAGTTCA
CACAAACAAAAGGGTTAGTAAGGCCTGGTAACACAGGAGGTATCGACCGGCAGCTGCATT
TGCCTGGCAGTGAACTGCAGAATGGCATTAGTACGCTTTGTCATGATTCCAGTAGGCTTT
TGCACTCTAAGGGTGCAATAGCTGAGGTTCTCAATCAAGGTCTAGGGGATTCTATGATCT
CTTCCAACTTGGACACATCACAGGATCTTCGTCGTGCTCTCTCTCTTCTGTCAACGAATT
CTTGGGGCTCATGTGAAACACAACCAATTCCATCTGACCACCCTATGCATGTAAACCAAA
CCAGCATGCCTCAATCTATTATGCATGCAGTGTCCCAAGGTATGTTACATTCAACCTCAG
AACACTGGAGGACCGAGCTTCCCTCAACTGATTCCCGGGTGCATATCTTGCCTTCACAAG
GTGATGGTAACACCCACTTTCAAGAGTTCAAGCTGTTCAAAGCGCCATACGAGTCTGGCT
TTTCTTCTGGTCAGTTGAACTGACTCCTTGATTCCAATCCCAGTGTAGGTCATACGTTAT
GAAAGGTCAGTAGGCTCTTGGATTCACTTTCTAACATCTTCAAATAGTGGAGGGAACCAG
GCAATCCAATGGTGAGAACCATTATGTGGTGGGATCACCTGGTTCAAATTGATGCCAAAT
TAAATTGTCTCTATTCTTTGCTTGTAGCCTCCTAATTCATCATACTTTGCAAAATGTTTG
CCTGTCTCCACTTTAGTTTGATAAAAATGGTGTTTGATGAGAATGGACCATCATCTCCAG
GAGCTATCAACTTCCACTGCCACGGATTCCAGGGACTGGCATCTGGTCTCCTTGCAGTAC
TCAACATGTGACATGTATTTTTGGTCCATTGACATGCAAAACACGATCATTTTGTAGTAT
TGCGTTGAAACGTCTTGTAATTTGGGTCATTTTGTAACTGCGCTTTTGTTTCTTAGAATT
AGAATTATGAATTAATTAGT