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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_01s0010g03620.t01
CDS Infomation

cds chromosome:12X:1:20954792:20957007:-1 gene:VIT_01s0010g03620 gene_biotype:protein_coding transcript_biotype:protein_coding description:Chlorophyll a-b binding protein, chloroplastic [Source:UniProtKB/TrEMBL;Acc:D7TAY3]
Sequence

ATGGCCTCTGTCTGTGCCTCCTCCGCCATGGCTGCTGTTGCCACCATCTCTCCCAGTTCT
CAGAAGACTGGGTCTGTTGTGGGAGCAACCAAGGCCTCTTTTCTTGGGGGGAAGAGACTG
AGCCTGAAGAAGTTCACGGCACCGGCAGCTGGGACGCGGTCTTTTACTGTATCCGCGGCG
GCGGCAGATCCTAACAGGCCTCTTTGGTTCCCAGGCAGCACCCCTCCTCCATGGCTTGAT
GGCAGCCTTCCTGGAGACTTTGGTTTCGATCCCCTTGGCCTTGGATCTGATCCAGAGACA
CTGAAATGGATGGTTCAGTCAGAGATAGTGCACTGCAGATGGGCAATGTTGGGAGCAGCT
GGAATTTTCATCCCAGAGTTCCTAACAAAAATTGGGATACTAAACACCCCATCCTGGTAC
ACTGCTGGAGAATTGGAGTACTTCACCGACAAAACCACACTCTTCATTGTTGAGATGATT
TTCATCGGTTGGGCTGAGGGGAGAAGATGGGCTGACATCATCAAGCCTGGGTGCGTCAAC
ACTGACCCCATTTTCCCCAACAACAAGCTCACCGGGACTGATGTTGGCTACCCAGGTGGG
CTCTGGTTCGACCCTCTTGGCTGGGGAAGCGGTTCGCCCGACAAGATCAAGGAGTTGAGA
ACAAAGGAGATCAAGAATGGGAGATTGGCTATGTTGGCTGTGATGGGTGCTTGGTTCCAA
GCCATCTACACTGGCACTGGCCCCATTGACAACCTCTTTGCCCACCTTGCTGATCCCGGA
CATGCCACCATTTTTGCTGCTTTCACCCCCAAGTGA

Peptide Sequence

PEP ID

VIT_01s0010g03620.t01
PEP Infomation

pep chromosome:12X:1:20954792:20957007:-1 gene:VIT_01s0010g03620 transcript:VIT_01s0010g03620.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Chlorophyll a-b binding protein, chloroplastic [Source:UniProtKB/TrEMBL;Acc:D7TAY3]
Sequence

MASVCASSAMAAVATISPSSQKTGSVVGATKASFLGGKRLSLKKFTAPAAGTRSFTVSAA
AADPNRPLWFPGSTPPPWLDGSLPGDFGFDPLGLGSDPETLKWMVQSEIVHCRWAMLGAA
GIFIPEFLTKIGILNTPSWYTAGELEYFTDKTTLFIVEMIFIGWAEGRRWADIIKPGCVN
TDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPDKIKELRTKEIKNGRLAMLAVMGAWFQ
AIYTGTGPIDNLFAHLADPGHATIFAAFTPK

Transcript Sequence

Transcript ID

VIT_01s0010g03620.t01
Transcript Infomation

cdna chromosome:12X:1:20954792:20957007:-1 gene:VIT_01s0010g03620 gene_biotype:protein_coding transcript_biotype:protein_coding description:Chlorophyll a-b binding protein, chloroplastic [Source:UniProtKB/TrEMBL;Acc:D7TAY3]
Sequence

ATCCCACCACCAATCAATTAACCTTCTCCATTGCTGATCACAAACCCTCCTCCATGGCCT
CTGTCTGTGCCTCCTCCGCCATGGCTGCTGTTGCCACCATCTCTCCCAGTTCTCAGAAGA
CTGGGTCTGTTGTGGGAGCAACCAAGGCCTCTTTTCTTGGGGGGAAGAGACTGAGCCTGA
AGAAGTTCACGGCACCGGCAGCTGGGACGCGGTCTTTTACTGTATCCGCGGCGGCGGCAG
ATCCTAACAGGCCTCTTTGGTTCCCAGGCAGCACCCCTCCTCCATGGCTTGATGGCAGCC
TTCCTGGAGACTTTGGTTTCGATCCCCTTGGCCTTGGATCTGATCCAGAGACACTGAAAT
GGATGGTTCAGTCAGAGATAGTGCACTGCAGATGGGCAATGTTGGGAGCAGCTGGAATTT
TCATCCCAGAGTTCCTAACAAAAATTGGGATACTAAACACCCCATCCTGGTACACTGCTG
GAGAATTGGAGTACTTCACCGACAAAACCACACTCTTCATTGTTGAGATGATTTTCATCG
GTTGGGCTGAGGGGAGAAGATGGGCTGACATCATCAAGCCTGGGTGCGTCAACACTGACC
CCATTTTCCCCAACAACAAGCTCACCGGGACTGATGTTGGCTACCCAGGTGGGCTCTGGT
TCGACCCTCTTGGCTGGGGAAGCGGTTCGCCCGACAAGATCAAGGAGTTGAGAACAAAGG
AGATCAAGAATGGGAGATTGGCTATGTTGGCTGTGATGGGTGCTTGGTTCCAAGCCATCT
ACACTGGCACTGGCCCCATTGACAACCTCTTTGCCCACCTTGCTGATCCCGGACATGCCA
CCATTTTTGCTGCTTTCACCCCCAAGTGACAGAAGCAAAGGAGAATGGTATCTTCTAGGA
AAACATTGGTGAAACATGTTTGGAGACCAAGAAAGGACATGGGAAAATGTGTGTTTTTCA
GAGAAATGTTTGTATCATTGGAACTTGTATTGCCTCTGATTATGTCTTCTAAAGAATGCT
CATGCAGTGTACAAATACCTCTATTAACTTAGATTCCATTTAAACAAGTTGGTCGTC