Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_01s0010g03560.t01
CDS Infomation

cds chromosome:12X:1:20910124:20913498:1 gene:VIT_01s0010g03560 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAAGTCCTTCATATCAGCCATCCTCTCTCTCTCACCCCTTTGTTTTGCAGCCACACAC
CAAGCCTCATGGCCTCTTCTTCTCCTTCTCTTCTCTGTCTCCTCTCTCATCTTCACTCTC
TTCCTCAACTTCTGGCTTGTCCCTGGAGGCTTTGCATGGAGAAACCACCATGGAAAGTAC
TCTTCAAAGCTCTCTGGTCCCATTGGCTGGCCCTTGTTGGGGTCCTTACCTCTAATGGGT
TCGCTCGCTCATCGAAAACTGGCCACCATGGCTGCTTCCTGTGGTGCAACTCGGCTCATG
GCATTGAGCCTTGGTGTAACTCCAGTTATCATCAGTAGTCACCCGGACACGGCCAAAGAA
ATCCTATGTGGGTCTTCTTTCTCCAACCGTCCAGTGAAGGCATCAGCTCGTCTACTGATG
TTCGAGCGCGCCATTGGCTTCGCTCCCTCCGGGGACTACTGGCGCCATCTTAGGCGCATC
GCCGCAAACTACATGTTCTCTCCCAAGAGAATTTCTGGGTCTGAGGCTGTCCGCCTCCGT
GTGGCTGATGAGATGGTAGTAGGAGTGCGGAAGGAGATGGAGGAGAGAAGTGTTGTGAAA
TTAAGAGGGATTTTACAGAAGGGCTCTCTGAGTAACATCATGGAGAGTGTGTTTGGTAGG
GGTTTAGGAAGTGTAGAAGGAGAGGGATTAGGGTTTATGGTGATAGAAGGATATGAATTG
ATTGCAAAATTCAATTGGGAAGATTACTTTCCACTAGGGTTTATAGACTTTTACGGGGTA
AAGAGAAGGTGTAGTAAATTGGCAGCTAAGGTGAATGGTGTGGTGGGGAAGATGATAGAA
GAAAGAAAAAGAGTTGGAGAGTTGAGTGGTGGTGGAAATGATTTTCTCAGTGTTTTGCTG
TCTTTGCCAAAAGAGGATCAGCTGAGTGATTCAGATATGGTTGCTGTCTTGTGGGAGATG
ATATTTAGAGGCACAGACACAGTGGCCATTCTTCTTGAATGGATCATGGCCAGAATGGTT
ATACACCAAGACATCCAAGCAAAAGCCCAGGAAGAGCTTGACACGTGCCTTGGCAACCAG
TCGCACGTGCAAGACTCTCACATTCAAAGCCTCCCTTATCTCCAAGCCATTGTGAAAGAG
GCCCTCCGAATGCACCCTCCAGGCCCATTACTCTCATGGGCCCGGCTCGCGATCCATGAT
GTCCACGTAGGCAAGTTCTTTGTGCCAGCTGGCACAACTGCAATGGTCAATATGTGGGCC
ATAGCCCATGACCCGACAATTTGGAAAGATCCATGGGCCTTTAAACCAGATCGGTTCATT
AACGAGGATGTGTCGATCATGGGTTCGGATCTAAGGCTGGCACCATTCGGGTCAGGTCGT
CGGGCATGCCCGGGAAAGGCACTCGGTTTAGCCACGGTTCACTTATGGCTCGCTCGACTT
CTCCATCAGTTCAAATGGCTCCCAACCCATCCCGTGGATCTTGGAGAATGCTTGAGGCTC
TCCCTTGAAATGAAGAAACCTCTCATTTGTTGTGCAATTCCTCGAGTGTGA

Peptide Sequence

PEP ID

VIT_01s0010g03560.t01
PEP Infomation

pep chromosome:12X:1:20910124:20913498:1 gene:VIT_01s0010g03560 transcript:VIT_01s0010g03560.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MKSFISAILSLSPLCFAATHQASWPLLLLLFSVSSLIFTLFLNFWLVPGGFAWRNHHGKY
SSKLSGPIGWPLLGSLPLMGSLAHRKLATMAASCGATRLMALSLGVTPVIISSHPDTAKE
ILCGSSFSNRPVKASARLLMFERAIGFAPSGDYWRHLRRIAANYMFSPKRISGSEAVRLR
VADEMVVGVRKEMEERSVVKLRGILQKGSLSNIMESVFGRGLGSVEGEGLGFMVIEGYEL
IAKFNWEDYFPLGFIDFYGVKRRCSKLAAKVNGVVGKMIEERKRVGELSGGGNDFLSVLL
SLPKEDQLSDSDMVAVLWEMIFRGTDTVAILLEWIMARMVIHQDIQAKAQEELDTCLGNQ
SHVQDSHIQSLPYLQAIVKEALRMHPPGPLLSWARLAIHDVHVGKFFVPAGTTAMVNMWA
IAHDPTIWKDPWAFKPDRFINEDVSIMGSDLRLAPFGSGRRACPGKALGLATVHLWLARL
LHQFKWLPTHPVDLGECLRLSLEMKKPLICCAIPRV

Transcript Sequence

Transcript ID

VIT_01s0010g03560.t01
Transcript Infomation

cdna chromosome:12X:1:20910124:20913498:1 gene:VIT_01s0010g03560 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AATGAAGTCCTTCATATCAGCCATCCTCTCTCTCTCACCCCTTTGTTTTGCAGCCACACA
CCAAGCCTCATGGCCTCTTCTTCTCCTTCTCTTCTCTGTCTCCTCTCTCATCTTCACTCT
CTTCCTCAACTTCTGGCTTGTCCCTGGAGGCTTTGCATGGAGAAACCACCATGGAAAGTA
CTCTTCAAAGCTCTCTGGTCCCATTGGCTGGCCCTTGTTGGGGTCCTTACCTCTAATGGG
TTCGCTCGCTCATCGAAAACTGGCCACCATGGCTGCTTCCTGTGGTGCAACTCGGCTCAT
GGCATTGAGCCTTGGTGTAACTCCAGTTATCATCAGTAGTCACCCGGACACGGCCAAAGA
AATCCTATGTGGGTCTTCTTTCTCCAACCGTCCAGTGAAGGCATCAGCTCGTCTACTGAT
GTTCGAGCGCGCCATTGGCTTCGCTCCCTCCGGGGACTACTGGCGCCATCTTAGGCGCAT
CGCCGCAAACTACATGTTCTCTCCCAAGAGAATTTCTGGGTCTGAGGCTGTCCGCCTCCG
TGTGGCTGATGAGATGGTAGTAGGAGTGCGGAAGGAGATGGAGGAGAGAAGTGTTGTGAA
ATTAAGAGGGATTTTACAGAAGGGCTCTCTGAGTAACATCATGGAGAGTGTGTTTGGTAG
GGGTTTAGGAAGTGTAGAAGGAGAGGGATTAGGGTTTATGGTGATAGAAGGATATGAATT
GATTGCAAAATTCAATTGGGAAGATTACTTTCCACTAGGGTTTATAGACTTTTACGGGGT
AAAGAGAAGGTGTAGTAAATTGGCAGCTAAGGTGAATGGTGTGGTGGGGAAGATGATAGA
AGAAAGAAAAAGAGTTGGAGAGTTGAGTGGTGGTGGAAATGATTTTCTCAGTGTTTTGCT
GTCTTTGCCAAAAGAGGATCAGCTGAGTGATTCAGATATGGTTGCTGTCTTGTGGGAGAT
GATATTTAGAGGCACAGACACAGTGGCCATTCTTCTTGAATGGATCATGGCCAGAATGGT
TATACACCAAGACATCCAAGCAAAAGCCCAGGAAGAGCTTGACACGTGCCTTGGCAACCA
GTCGCACGTGCAAGACTCTCACATTCAAAGCCTCCCTTATCTCCAAGCCATTGTGAAAGA
GGCCCTCCGAATGCACCCTCCAGGCCCATTACTCTCATGGGCCCGGCTCGCGATCCATGA
TGTCCACGTAGGCAAGTTCTTTGTGCCAGCTGGCACAACTGCAATGGTCAATATGTGGGC
CATAGCCCATGACCCGACAATTTGGAAAGATCCATGGGCCTTTAAACCAGATCGGTTCAT
TAACGAGGATGTGTCGATCATGGGTTCGGATCTAAGGCTGGCACCATTCGGGTCAGGTCG
TCGGGCATGCCCGGGAAAGGCACTCGGTTTAGCCACGGTTCACTTATGGCTCGCTCGACT
TCTCCATCAGTTCAAATGGCTCCCAACCCATCCCGTGGATCTTGGAGAATGCTTGAGGCT
CTCCCTTGAAATGAAGAAACCTCTCATTTGTTGTGCAATTCCTCGAGTGTGAGTTTGTAA
TCCTCTCAAAAAAAAATGTGAATTTTTCG