Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_01s0010g03350.t01
CDS Infomation

cds chromosome:12X:1:20690942:20695040:1 gene:VIT_01s0010g03350 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGCCGATCGCCTCTACCTCAATCTTCCGCTACAGCAATCCTTCCTCACTCCTCCTCCTC
CGCCGTGGCGCTGCTGCCTCTTTCCGCCACCTCTCCTTTGTCGCCAAACACCAAAACCCC
ATCTCCAGAAAACCTCAAAATAAGAATCTCCTCCGAGCAAAACAGACAGTCAAGCACCTC
TCCTCCCTCTCGCCGACGCTCCCAGTGAACCATCGCCCCCTCCTGTCCGCCACTGAAGCC
GTCGGCATGGTTGCTGCTGCCCAAGCAAACTTCATGCGAGTCATAGTCGAAGATTCTAGA
GTCGAAGACGGCGACGGCGGCGGCGACGGAGATGGCGATGGCGATGCCGTCAGGGTTGGG
GTTGAGCTGCTGTGTGTGGTGAGAGCCGTGTTGAAGAAGATCAAGAGGAGGGTTTTGGTG
GGAGATAAGGTGTTGGTTGGGTCGATAGATTGGGTGGATCGCCGGGGCGTGATTGAGAAT
GTGTTCTCGAGGAAATCGGAGATTCTGGACCCTCCAGTGGCCAATGTGGATCACCTGTTG
GTGCTTTTCGCGATGGAGCAGCCAAAATTGGAGGTGTATTCGCTTACTCGGTTTTTGGTG
GAGGCTGAGTCCACTGGGATTCCGATCACACTCGCATTGAACAAATCGGAACTCGTCGAC
GAAGAGACACGAGTTGCTTGGAAATCAAGGCTCCGAAGTTGGGGCTATGGGCCAGTTTTT
TGCAGTGTTGAATCCAAGTTTGGACTTGATACTCTTGCATTCAGCTTGAGAGAACAAACA
ACTGTGATTGTAGGTCCAAGTGGAGTAGGGAAGTCTAGTCTCATAAATGCTTTGAGAAGC
AACCACCCTCTTATTAATGTTTCTTCTGAAGAGAACAATTGGTTTGATTCTATTTTAGGG
AGCAAATTGTTAGAAGAACAGCGTGTTGGGGAAGTGTCAGTAAGAAGTGGGAGAGGGAAG
CACACTACTCGCCATGTATCCTTACTTCCGCTATCTGGAGGGGGATATCTTGCTGATACT
CCTGGGTTTAACCAACCAAGCTTGCTGAAAGTAACAACTCAATCTCTTGCACAGACTTTC
CCAGAGATCAGGAAATTGCTCAGTGGCAGTGCTAATGAACCTGAAAAATGCTCATTCAAT
GATTGCTTGCATCTTGGTGAGCCAGGGTGCGTTGTGAAAGGAGATTGGGAAAGATATCCA
TACTATTTTCAACTGCTTGATGAGATAAAAATCAGAGAAGAATTTCAGTTGAGGACCCTG
GGAACCAAAAGAGAGGGTGATGTGAGGTACAAGACAGGTGATATGGGTGTCAAGCAAGCA
GAACCACGACTTGAGCCTAAGAAGCACAGAAGACAATCTCGCAAGAGGATGAACCAGTCC
ATCCTAGACGAGTTGGACGACCTTGATGATGATGATAGCTTATTAGATGCTGAAGGTGAC
TCGATTTTAAATGAAATAGGCAATGAAAATCAGTAG

Peptide Sequence

PEP ID

VIT_01s0010g03350.t01
PEP Infomation

pep chromosome:12X:1:20690942:20695040:1 gene:VIT_01s0010g03350 transcript:VIT_01s0010g03350.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MPIASTSIFRYSNPSSLLLLRRGAAASFRHLSFVAKHQNPISRKPQNKNLLRAKQTVKHL
SSLSPTLPVNHRPLLSATEAVGMVAAAQANFMRVIVEDSRVEDGDGGGDGDGDGDAVRVG
VELLCVVRAVLKKIKRRVLVGDKVLVGSIDWVDRRGVIENVFSRKSEILDPPVANVDHLL
VLFAMEQPKLEVYSLTRFLVEAESTGIPITLALNKSELVDEETRVAWKSRLRSWGYGPVF
CSVESKFGLDTLAFSLREQTTVIVGPSGVGKSSLINALRSNHPLINVSSEENNWFDSILG
SKLLEEQRVGEVSVRSGRGKHTTRHVSLLPLSGGGYLADTPGFNQPSLLKVTTQSLAQTF
PEIRKLLSGSANEPEKCSFNDCLHLGEPGCVVKGDWERYPYYFQLLDEIKIREEFQLRTL
GTKREGDVRYKTGDMGVKQAEPRLEPKKHRRQSRKRMNQSILDELDDLDDDDSLLDAEGD
SILNEIGNENQ

Transcript Sequence

Transcript ID

VIT_01s0010g03350.t01
Transcript Infomation

cdna chromosome:12X:1:20690942:20695040:1 gene:VIT_01s0010g03350 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AACGGATAGACCTCAAAGCTCATGAGAATAGGAATCGAATCCAATTAATTTCCCTAATTC
CTAACCCTAACTGTGAAAATCATCTCGATGCCGATCGCCTCTACCTCAATCTTCCGCTAC
AGCAATCCTTCCTCACTCCTCCTCCTCCGCCGTGGCGCTGCTGCCTCTTTCCGCCACCTC
TCCTTTGTCGCCAAACACCAAAACCCCATCTCCAGAAAACCTCAAAATAAGAATCTCCTC
CGAGCAAAACAGACAGTCAAGCACCTCTCCTCCCTCTCGCCGACGCTCCCAGTGAACCAT
CGCCCCCTCCTGTCCGCCACTGAAGCCGTCGGCATGGTTGCTGCTGCCCAAGCAAACTTC
ATGCGAGTCATAGTCGAAGATTCTAGAGTCGAAGACGGCGACGGCGGCGGCGACGGAGAT
GGCGATGGCGATGCCGTCAGGGTTGGGGTTGAGCTGCTGTGTGTGGTGAGAGCCGTGTTG
AAGAAGATCAAGAGGAGGGTTTTGGTGGGAGATAAGGTGTTGGTTGGGTCGATAGATTGG
GTGGATCGCCGGGGCGTGATTGAGAATGTGTTCTCGAGGAAATCGGAGATTCTGGACCCT
CCAGTGGCCAATGTGGATCACCTGTTGGTGCTTTTCGCGATGGAGCAGCCAAAATTGGAG
GTGTATTCGCTTACTCGGTTTTTGGTGGAGGCTGAGTCCACTGGGATTCCGATCACACTC
GCATTGAACAAATCGGAACTCGTCGACGAAGAGACACGAGTTGCTTGGAAATCAAGGCTC
CGAAGTTGGGGCTATGGGCCAGTTTTTTGCAGTGTTGAATCCAAGTTTGGACTTGATACT
CTTGCATTCAGCTTGAGAGAACAAACAACTGTGATTGTAGGTCCAAGTGGAGTAGGGAAG
TCTAGTCTCATAAATGCTTTGAGAAGCAACCACCCTCTTATTAATGTTTCTTCTGAAGAG
AACAATTGGTTTGATTCTATTTTAGGGAGCAAATTGTTAGAAGAACAGCGTGTTGGGGAA
GTGTCAGTAAGAAGTGGGAGAGGGAAGCACACTACTCGCCATGTATCCTTACTTCCGCTA
TCTGGAGGGGGATATCTTGCTGATACTCCTGGGTTTAACCAACCAAGCTTGCTGAAAGTA
ACAACTCAATCTCTTGCACAGACTTTCCCAGAGATCAGGAAATTGCTCAGTGGCAGTGCT
AATGAACCTGAAAAATGCTCATTCAATGATTGCTTGCATCTTGGTGAGCCAGGGTGCGTT
GTGAAAGGAGATTGGGAAAGATATCCATACTATTTTCAACTGCTTGATGAGATAAAAATC
AGAGAAGAATTTCAGTTGAGGACCCTGGGAACCAAAAGAGAGGGTGATGTGAGGTACAAG
ACAGGTGATATGGGTGTCAAGCAAGCAGAACCACGACTTGAGCCTAAGAAGCACAGAAGA
CAATCTCGCAAGAGGATGAACCAGTCCATCCTAGACGAGTTGGACGACCTTGATGATGAT
GATAGCTTATTAGATGCTGAAGGTGACTCGATTTTAAATGAAATAGGCAATGAAAATCAG
TAGGGAGCATGCTTGGCTCGTTCATATGCTGTGAACAGTTCTTGACCAGCTCTTTTGTTA
TAAATCATGAAGAGG