Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_01s0010g03300.t01
CDS Infomation

cds chromosome:12X:1:20625434:20652903:1 gene:VIT_01s0010g03300 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAGTGGAAATGGAAGAAGAAGTGCTCGAAGTAGAATCAAATCCTCCGCGGATGTCGAT
GAATTCGATCGTCGCCGGAACTCAAAACCTGACCGGGAAGTCCGAAAGGACAGAATCGGA
GATCACAGCTTCATTAGAATTTTAAATGTTAATATCAAGGCTCTGCTTGGGTTTGTGGTT
TTGGCTTTCTTCATTGTCTTGTTCCTAATTCTTCACTTAATGAAACCGGTTGAAGATGCT
CAAAGACCTAGGGTTGTTACGCCATTTCCTGCCCCAAAGATCATGGATCTTCCTCAGTTC
CAAGGCGAGCACAAGGAGAGCTTGTATTGGGGAACATATCGCCCTCAGGTTTATCTTGGA
ATTCGTGCCAGGACACCCCAATCTTTGGTTGCTGGTTTGATGTGGATTGGAGTAAAGGAT
GGAAGATATTTCATGCGACATGTCTGCCAAGATTCTGATGAGCTCAGCACGTATGGTTGG
ACACATCACAATGGAAGGGATTATGGACATCAGGTGCTGATTGACCATGGCATGACCTTG
GCTACAAGTTTCTTGAAATCCAAGGAGGACGGCAGTGGCTATGGAGGAGACTGGACGGTT
CGAATTGATGTGAAAAGTGAGAAGTGGAATGAGGAAATGTTGAGAAGTGCACACCTTTTT
TTCTATTTGGCTGATGAAGATGGAAATGCTCTAAGTTTGAGTGGAGACATCTTGGACATT
CGTGAGAATTCTCTTCTGGCATTGGGTTCAAGAATGGATGTCGGAGGTTGGCAGCTGCAT
TTAGAATCAGTGGATGATTTGGAAGTCCATTATTCTGGTTTCAGGACACCTCACATTCAC
AATTTATCTGATCTTGTCCAGGAAAGTCTTGGAGAGCAAGTAAGAAAGTTTGGTCGTCTG
CAGCTCCCAGACACATCTGATAATTCTCCAAACATTTTAGTTTTTCAGATTTCTGCTAAG
GTTCCTTTCAAAATAGACATTCCTTTTCTATCTGGAACTGGTTTGAAAAGCTCAAGGGTA
GAAGAACGTCTCAATAGCCTTACAGGTACCTCCCTGACCAGAGAATTAATTGAGAAGCAA
AATGAATTTGACAACAAATTTGAGAAATGCTTCAATCTTACCAGCAAGGTTGACTCTGAA
TCTTTGATTGTTGGTAAGGCTGCTATTGGAAATATGTTAGGTGGCATTGGCTATTTCTAT
GGCCAATCAAAAATTTCACTCCCAAAAAACAATAATTTTAAGAGTCATGATAATTTTATT
TCATATTGGCCGGCTGAACTTTACACAGCTGTTCCAAGTCGATCCTTCTTTCCAAGGGGA
TTTTTATGGGATGAAGGTTTTCATCAGCTACTAATTTGGCGTTGGGACATCCGCATTTGT
TTGGATATAATTGGACATTGGTTAGATTTAATGAACATTGATGGATGGATACCAAGGGAG
CAAATTTTGGGTGCCGAAGCTCTAAGTAAGGTCCCAGAGGAATTTGTTCTTCAGCATCCA
ACTAATGGAAATCCCCCAACTTTATTTTTGGTTTTACATGATCTAGTTTCTAGCTTAAAA
AGAAACAAGTTTACTTCCATGGAAAGCAATGAGATATCTTCCTTCCTAGAACGGGCATTT
GTTCGTCTGGAAGCTTGGTTCCAATGGTTCAATACTACACAATCAGGAAATGAGATGAGT
AGCTATTTTTGGCACGGAAGAGACAGCACCACAACTCGGGAACTAAATCCAAAGACACTG
TCCTCTGGCTTGGACGATTACCCACGAGCATCACACCCTAGTGGAGAAGAGCACCATGTG
GATCTTAGATGCTGGATGCTTCTTGCAGCTGAATGCATGCATTCCATCACAGAGTTATTC
CGGAAGGAAAATGGACTGGAAAAGGAGTATGGTTCAACTGCTAAGCTGCTCTCAGATTTT
GACATTCTGAATCAGATGCACCTTGATAAGGCACATGGAGCTTATTTTGATTTTGGAAAT
CATACAGAGAAGGTTCGATTAAGTTGGAAAGAAGTGAGGGCAGGGAACAACTATCCTACT
CGAGAACTCGTTAGAGAAACATTAGAGAAGCCAGAGTTGAGGCTGGTTCCACATATTGGT
TATGTCAGCCTTTTTCCATTTATGGAGAAGATCATTCCACCCGAGTCATGGATCCTAGAA
AAACAGCTTGACCTAATTTCAAACAGGAGCACCTTATGGACCGACTATGGACTCCGCTCC
CTTTCTAAAACAAGCTCATTATACATGAAACGTAACACAGAGCATGACCCACCTTACTGG
AGAGGTCCAATTTGGATGAACATGAATTACAGGATTCTTTCTGCACTCCACCATTATTCC
CAAGTTGATGGACCATACAGAGACAAGGCCAGAATCATCTACAATGACTTGAGGGGAAAT
TTGATTAGAAATGTGGTTCACAACTACTACCAGTCTGGTTATTTGTGGGAACAGTATGAT
CAAAAGAAGGGGAAGGGAAAAGGTGCACGGCCGTTTACTGGCTGGACATCCCTTGTGTTA
CTGATTATGGCAGAAACATATTGTGAGAGGTAG

Peptide Sequence

PEP ID

VIT_01s0010g03300.t01
PEP Infomation

pep chromosome:12X:1:20625434:20652903:1 gene:VIT_01s0010g03300 transcript:VIT_01s0010g03300.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MSGNGRRSARSRIKSSADVDEFDRRRNSKPDREVRKDRIGDHSFIRILNVNIKALLGFVV
LAFFIVLFLILHLMKPVEDAQRPRVVTPFPAPKIMDLPQFQGEHKESLYWGTYRPQVYLG
IRARTPQSLVAGLMWIGVKDGRYFMRHVCQDSDELSTYGWTHHNGRDYGHQVLIDHGMTL
ATSFLKSKEDGSGYGGDWTVRIDVKSEKWNEEMLRSAHLFFYLADEDGNALSLSGDILDI
RENSLLALGSRMDVGGWQLHLESVDDLEVHYSGFRTPHIHNLSDLVQESLGEQVRKFGRL
QLPDTSDNSPNILVFQISAKVPFKIDIPFLSGTGLKSSRVEERLNSLTGTSLTRELIEKQ
NEFDNKFEKCFNLTSKVDSESLIVGKAAIGNMLGGIGYFYGQSKISLPKNNNFKSHDNFI
SYWPAELYTAVPSRSFFPRGFLWDEGFHQLLIWRWDIRICLDIIGHWLDLMNIDGWIPRE
QILGAEALSKVPEEFVLQHPTNGNPPTLFLVLHDLVSSLKRNKFTSMESNEISSFLERAF
VRLEAWFQWFNTTQSGNEMSSYFWHGRDSTTTRELNPKTLSSGLDDYPRASHPSGEEHHV
DLRCWMLLAAECMHSITELFRKENGLEKEYGSTAKLLSDFDILNQMHLDKAHGAYFDFGN
HTEKVRLSWKEVRAGNNYPTRELVRETLEKPELRLVPHIGYVSLFPFMEKIIPPESWILE
KQLDLISNRSTLWTDYGLRSLSKTSSLYMKRNTEHDPPYWRGPIWMNMNYRILSALHHYS
QVDGPYRDKARIIYNDLRGNLIRNVVHNYYQSGYLWEQYDQKKGKGKGARPFTGWTSLVL
LIMAETYCER

Transcript Sequence

Transcript ID

VIT_01s0010g03300.t01
Transcript Infomation

cdna chromosome:12X:1:20625434:20652903:1 gene:VIT_01s0010g03300 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AAACCTCACTCCATCGTTGACATCCGTGAATCTGTGTTTTCCAATAAATGAGTGGAAATG
GAAGAAGAAGTGCTCGAAGTAGAATCAAATCCTCCGCGGATGTCGATGAATTCGATCGTC
GCCGGAACTCAAAACCTGACCGGGAAGTCCGAAAGGACAGAATCGGAGATCACAGCTTCA
TTAGAATTTTAAATGTTAATATCAAGGCTCTGCTTGGGTTTGTGGTTTTGGCTTTCTTCA
TTGTCTTGTTCCTAATTCTTCACTTAATGAAACCGGTTGAAGATGCTCAAAGACCTAGGG
TTGTTACGCCATTTCCTGCCCCAAAGATCATGGATCTTCCTCAGTTCCAAGGCGAGCACA
AGGAGAGCTTGTATTGGGGAACATATCGCCCTCAGGTTTATCTTGGAATTCGTGCCAGGA
CACCCCAATCTTTGGTTGCTGGTTTGATGTGGATTGGAGTAAAGGATGGAAGATATTTCA
TGCGACATGTCTGCCAAGATTCTGATGAGCTCAGCACGTATGGTTGGACACATCACAATG
GAAGGGATTATGGACATCAGGTGCTGATTGACCATGGCATGACCTTGGCTACAAGTTTCT
TGAAATCCAAGGAGGACGGCAGTGGCTATGGAGGAGACTGGACGGTTCGAATTGATGTGA
AAAGTGAGAAGTGGAATGAGGAAATGTTGAGAAGTGCACACCTTTTTTTCTATTTGGCTG
ATGAAGATGGAAATGCTCTAAGTTTGAGTGGAGACATCTTGGACATTCGTGAGAATTCTC
TTCTGGCATTGGGTTCAAGAATGGATGTCGGAGGTTGGCAGCTGCATTTAGAATCAGTGG
ATGATTTGGAAGTCCATTATTCTGGTTTCAGGACACCTCACATTCACAATTTATCTGATC
TTGTCCAGGAAAGTCTTGGAGAGCAAGTAAGAAAGTTTGGTCGTCTGCAGCTCCCAGACA
CATCTGATAATTCTCCAAACATTTTAGTTTTTCAGATTTCTGCTAAGGTTCCTTTCAAAA
TAGACATTCCTTTTCTATCTGGAACTGGTTTGAAAAGCTCAAGGGTAGAAGAACGTCTCA
ATAGCCTTACAGGTACCTCCCTGACCAGAGAATTAATTGAGAAGCAAAATGAATTTGACA
ACAAATTTGAGAAATGCTTCAATCTTACCAGCAAGGTTGACTCTGAATCTTTGATTGTTG
GTAAGGCTGCTATTGGAAATATGTTAGGTGGCATTGGCTATTTCTATGGCCAATCAAAAA
TTTCACTCCCAAAAAACAATAATTTTAAGAGTCATGATAATTTTATTTCATATTGGCCGG
CTGAACTTTACACAGCTGTTCCAAGTCGATCCTTCTTTCCAAGGGGATTTTTATGGGATG
AAGGTTTTCATCAGCTACTAATTTGGCGTTGGGACATCCGCATTTGTTTGGATATAATTG
GACATTGGTTAGATTTAATGAACATTGATGGATGGATACCAAGGGAGCAAATTTTGGGTG
CCGAAGCTCTAAGTAAGGTCCCAGAGGAATTTGTTCTTCAGCATCCAACTAATGGAAATC
CCCCAACTTTATTTTTGGTTTTACATGATCTAGTTTCTAGCTTAAAAAGAAACAAGTTTA
CTTCCATGGAAAGCAATGAGATATCTTCCTTCCTAGAACGGGCATTTGTTCGTCTGGAAG
CTTGGTTCCAATGGTTCAATACTACACAATCAGGAAATGAGATGAGTAGCTATTTTTGGC
ACGGAAGAGACAGCACCACAACTCGGGAACTAAATCCAAAGACACTGTCCTCTGGCTTGG
ACGATTACCCACGAGCATCACACCCTAGTGGAGAAGAGCACCATGTGGATCTTAGATGCT
GGATGCTTCTTGCAGCTGAATGCATGCATTCCATCACAGAGTTATTCCGGAAGGAAAATG
GACTGGAAAAGGAGTATGGTTCAACTGCTAAGCTGCTCTCAGATTTTGACATTCTGAATC
AGATGCACCTTGATAAGGCACATGGAGCTTATTTTGATTTTGGAAATCATACAGAGAAGG
TTCGATTAAGTTGGAAAGAAGTGAGGGCAGGGAACAACTATCCTACTCGAGAACTCGTTA
GAGAAACATTAGAGAAGCCAGAGTTGAGGCTGGTTCCACATATTGGTTATGTCAGCCTTT
TTCCATTTATGGAGAAGATCATTCCACCCGAGTCATGGATCCTAGAAAAACAGCTTGACC
TAATTTCAAACAGGAGCACCTTATGGACCGACTATGGACTCCGCTCCCTTTCTAAAACAA
GCTCATTATACATGAAACGTAACACAGAGCATGACCCACCTTACTGGAGAGGTCCAATTT
GGATGAACATGAATTACAGGATTCTTTCTGCACTCCACCATTATTCCCAAGTTGATGGAC
CATACAGAGACAAGGCCAGAATCATCTACAATGACTTGAGGGGAAATTTGATTAGAAATG
TGGTTCACAACTACTACCAGTCTGGTTATTTGTGGGAACAGTATGATCAAAAGAAGGGGA
AGGGAAAAGGTGCACGGCCGTTTACTGGCTGGACATCCCTTGTGTTACTGATTATGGCAG
AAACATATTGTGAGAGGTAGGGCATGTCATTTTTGTAACTTATCAAAAAATTGCAATGTC
CAACATTAGTGGGAGTTCTGTACTACAATATTTAACAAAGTAACAACATTAA