Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_01s0010g02900.t01
CDS Infomation

cds chromosome:12X:1:19942816:19949698:1 gene:VIT_01s0010g02900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Proteasome subunit beta type [Source:UniProtKB/TrEMBL;Acc:D7TAR8]
Sequence

ATGAAGCTTGACACTAGTGGTCTTGAGTCAACTGTACCGCTCTTCGGGGCTAATAGCGAG
CTTCTTGGTGGGTTTTCAGCTGCTCCTTCATTTGAGCTTCCAAACACTACTGATTTTGAT
GGGTTTCAGAAAGATGCTATTCAAATGGTGAAGCCAGCAAAGGGAACAACAACTCTTGCC
TTCATTTTTAAGGAGGGTGTAATGGTTGCTGCTGATTCTCGTGCTAGCATGGGAGGATAT
ATCTCATCACAATCTGTGAAGAAAATTATTGAAATTAATCCCTACATGCTTGGCACAATG
GCTGGAGGAGCTGCTGATTGCCAGTTTTGGCACAGAAATTTGGGCATTAAGTGCCGACTG
CATGAACTTGCAAACAAGCGAAGGATTTCAGTTACAGGGGCTTCAAAACTGCTGGCAAAC
ATTCTATATTCTTACCGTGGAATGGGTCTATCTGTTGGGACCATGATTGCTGGGTGGGAT
GAAACGGGTCCTGGACTGTATTATGTGGACAGTGAAGGGGGCAGGCTGAAAGGAACACGA
TTCTCTGTTGGATCTGGTTCGCCTTATGCTTATGGTGTACTGGATAATGGATACCGTTAT
GATATGTCTGTTGAGGAAGCTGCTGAATTGGCTAGACGATCTATTTATCATGCGACATTC
CGTGATGGAGCTAGTGGTGGAGTTGCAAGCGTTTATTATGTGGGGCCAAATGGGTGGAAG
AAGCTGTCTGGTGATGATGTCGGAGAACTCCACTACAAATACTACCCGGTTATGCCAAGC
ACAGTGGAACAGGAAATGGTTGAAGTAGCAGGAGCTTGA

Peptide Sequence

PEP ID

VIT_01s0010g02900.t01
PEP Infomation

pep chromosome:12X:1:19942816:19949698:1 gene:VIT_01s0010g02900 transcript:VIT_01s0010g02900.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Proteasome subunit beta type [Source:UniProtKB/TrEMBL;Acc:D7TAR8]
Sequence

MKLDTSGLESTVPLFGANSELLGGFSAAPSFELPNTTDFDGFQKDAIQMVKPAKGTTTLA
FIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRL
HELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTR
FSVGSGSPYAYGVLDNGYRYDMSVEEAAELARRSIYHATFRDGASGGVASVYYVGPNGWK
KLSGDDVGELHYKYYPVMPSTVEQEMVEVAGA

Transcript Sequence

Transcript ID

VIT_01s0010g02900.t01
Transcript Infomation

cdna chromosome:12X:1:19942816:19949698:1 gene:VIT_01s0010g02900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Proteasome subunit beta type [Source:UniProtKB/TrEMBL;Acc:D7TAR8]
Sequence

CAGTTCTTCTCCAAACGCTGCGTTTCGATCGATCTGTGAGTTCTAGGCTATAAGCATGAA
GCTTGACACTAGTGGTCTTGAGTCAACTGTACCGCTCTTCGGGGCTAATAGCGAGCTTCT
TGGTGGGTTTTCAGCTGCTCCTTCATTTGAGCTTCCAAACACTACTGATTTTGATGGGTT
TCAGAAAGATGCTATTCAAATGGTGAAGCCAGCAAAGGGAACAACAACTCTTGCCTTCAT
TTTTAAGGAGGGTGTAATGGTTGCTGCTGATTCTCGTGCTAGCATGGGAGGATATATCTC
ATCACAATCTGTGAAGAAAATTATTGAAATTAATCCCTACATGCTTGGCACAATGGCTGG
AGGAGCTGCTGATTGCCAGTTTTGGCACAGAAATTTGGGCATTAAGTGCCGACTGCATGA
ACTTGCAAACAAGCGAAGGATTTCAGTTACAGGGGCTTCAAAACTGCTGGCAAACATTCT
ATATTCTTACCGTGGAATGGGTCTATCTGTTGGGACCATGATTGCTGGGTGGGATGAAAC
GGGTCCTGGACTGTATTATGTGGACAGTGAAGGGGGCAGGCTGAAAGGAACACGATTCTC
TGTTGGATCTGGTTCGCCTTATGCTTATGGTGTACTGGATAATGGATACCGTTATGATAT
GTCTGTTGAGGAAGCTGCTGAATTGGCTAGACGATCTATTTATCATGCGACATTCCGTGA
TGGAGCTAGTGGTGGAGTTGCAAGCGTTTATTATGTGGGGCCAAATGGGTGGAAGAAGCT
GTCTGGTGATGATGTCGGAGAACTCCACTACAAATACTACCCGGTTATGCCAAGCACAGT
GGAACAGGAAATGGTTGAAGTAGCAGGAGCTTGAGAGAAAGATGCCTTGGAACAACTTAG
ACCAGGTTTGAGATGTTCTCGTTCTTAATACATGACATGAAGGGATGGATTCGCCTATGT
TCTGATGAACCCAAAAATCCTTGAATACATGTACTTTGGTTTGATCCCAAACAACTCATT
AACAGACCCGGGTTTCAGTTATTGTCATAAGAACCTTTACTATTATGATC