Gene sequences

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Trait-Related Loci

Vitis vinifera

CDS Sequence

CDS ID	VIT_01s0010g02890.t01
CDS Infomation	cds chromosome:12X:1:19925500:19929463:-1 gene:VIT_01s0010g02890 gene_biotype:protein_coding transcript_biotype:protein_coding description:RING-type E3 ubiquitin transferase [Source:UniProtKB/TrEMBL;Acc:F6HG65]
Sequence	ATGGATATTCATGAGGTTGAAGAGAGTTTGTTCGCGGTCAGTGATGCCAAGTTACATGGA GGGATGTGCAGGATGCTCTCCACGATTTATTGCAAAATACTGGAAATTTTCCCTGTTCTG GAAGCAGCAAGGCCTAGGAGCAAATCAGGTATTCAGGCATTATGCTCATTGCACATAGCG CTGGAGAAGGCCAAGAATATTCTTCAGCATTGCTCAGAATGTAGTAAACTTTATTTGGCT ATTACTGGTGATTCAGTGGCTTTAAAATTCGAGAAGGCACGATGTGCTCTTGCAGATAGT CTGAGGCGAGTTGAAGATATTGTTCCACAAACTATTGGTGTCCAGATTTCTGAGATAGTA AGTGAACTTGAGGGAACTGCATTCGCACTTGATCCATTGGAGAAGCAAGTTGGTGATGAT ATAATTGCATTGCTCCAGCAGGGCAGAAAATTCAACAACAGCAATGACAATAATGAGCTC GAGTCTTTTCACCAAGCTGCTTCTAGACTTGGTATCACCTCTTCAAGAGCAGCCCTTACA GAGAGAAGAGCTCTTAAGAAGCTCATAGAAAGAGCTCGTATTGAGGAAGACAAGCGGAAA GAATCAATTGTTGCTTATCTTTTACATCTCATGAGAAAATACTCTAAGTTATTTAGAAGT GAGTTATCAGATGACAATGATTCACAGGGTTCGGCTCCTTGTTCGCCGACTGTTATGGGT TCTCTTGAAGATGGTGTTGGACCTGCAGTCTATGGTCATGCCTTTGAGAGACAGCTCTCA AAACTTGGTTCTTTCAATTTCAAGCCAAATAATAGGAGATCTGGGCAGATGCCTCTTCCA CAAGAAGAGTTGAGGTGTCCAATATCATTGCAGCTCATGTATGATCCAGTGATAATATCT TCTGGGCAAACGTATGAAAGAATCTGCATTGAGAAATGGTTCAGTGATGGGCACAACACT TGCCCGAAAACTCAACAGCAGCTATCTCATCTTTGTCTAACTCCTAATTACTGTGTTAAG GGTCTCATTGCGAGCTGGTGTGAACAGAATGGAGTTCCTGTTCCTGATGGCCCTCCAGAG TCTCTTGATCTCAACTACTGGAGGCTCGCTTTGTCTGAGTGTGAGTCAACAAATTCGAAA TCAATGGACAGCATTGGTTCCTGCAAGATGAAGGGGGTAAAGGTGGTTCCTTTAGAGGAG AGTGGCATAATTGAGGAGGTCGAGGGAAATGAAATGGAAAATGTGCATGAACAGGATGAA GAGTCTGAAAACGTGTTTGAAAGATATGAGAACTTTCTGGCTATCTTGGATGGAGAGGAA GACTTGAGGAAAAAGTGCAAGGTGGCAGAACAGATCAGACACTTGCTAAAGGACGATGAG GAAGCCAGGAATTTTATGGGAGCTAATGGGTTTGTTGAAGCATTGATGCGCTTTTTAGAG TTGGCTGTGCGAGGAAGGAATGAAATGGCTCAGGAAATTGGGGCTATGGCTCTGTTCAAT CTTGCTGTTAACAATAACAGAAACAAGGAACTGATGTTGGCATCGGGAGTACTCCCATTG CTTGAGGAAATGATCCCCAATTCCAACTCCCATGGATCAGCTACAGCCCTCTACCTGAAC CTTTCTTGTCTTGAAGAAGCCAAGCCCATGATTAGCACAAGCCAAGCTGTCCCCTTTTTA ATCCATCTGCTTGGAGCTAAAACTGAACCGCAATGCAAGCTTGATGCCCTCCATGCCCTC TATAATCTCTCCACCCATCCTGCCAATATCCCCAACCTACTTGCAGCTGGCATTATCAGC GGCCTCCATTCCCTTCTCACAGACCCGGCTGACAACACATGGACAGAAAAAACCTTGGCT GTCTTTGTAAACTTGGCTTCAAATAAATTAGGAAAAGATGAAATCATGGTAGCCCCTGGC CTTATTAGTGGGTTGGCAACGATACTGGATGTTGGTGAGGCCATTGAGCAGGAGCAAGCT GTTGTCTGTCTTCTGATCTTATGTAATGGGAGTGAGAAATGCAGTCAGATGGTCCTCCAA GAAGGGGTGATACCTGCATTGGTTTCCATATCAGTGAATGGGACCGTGAGAGGGAAAGAA AAGGCTCAGAAACTTCTGATGCTGTTTCGGGAGCAGCGGCAGCGAGACCCATCACCTGTT GGGAGTCCTCATCATACTGAAAGCAGTACCGAGGCTGTGCCTGGTCCTGAATCAAAGCCA TTGGAATCAAAAGCGCTGGAAACAAAGCCATTGGAATCCAAGCCATATTGTAAATCGATC TCAAGAAGAAAAGTGGGAAAGGCTTGGAATTACTTGTGGAAGAGCAAGAACTATTCGGTT TACCAGTGTTGA

Peptide Sequence

PEP ID	VIT_01s0010g02890.t01
PEP Infomation	pep chromosome:12X:1:19925500:19929463:-1 gene:VIT_01s0010g02890 transcript:VIT_01s0010g02890.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:RING-type E3 ubiquitin transferase [Source:UniProtKB/TrEMBL;Acc:F6HG65]
Sequence	MDIHEVEESLFAVSDAKLHGGMCRMLSTIYCKILEIFPVLEAARPRSKSGIQALCSLHIA LEKAKNILQHCSECSKLYLAITGDSVALKFEKARCALADSLRRVEDIVPQTIGVQISEIV SELEGTAFALDPLEKQVGDDIIALLQQGRKFNNSNDNNELESFHQAASRLGITSSRAALT ERRALKKLIERARIEEDKRKESIVAYLLHLMRKYSKLFRSELSDDNDSQGSAPCSPTVMG SLEDGVGPAVYGHAFERQLSKLGSFNFKPNNRRSGQMPLPQEELRCPISLQLMYDPVIIS SGQTYERICIEKWFSDGHNTCPKTQQQLSHLCLTPNYCVKGLIASWCEQNGVPVPDGPPE SLDLNYWRLALSECESTNSKSMDSIGSCKMKGVKVVPLEESGIIEEVEGNEMENVHEQDE ESENVFERYENFLAILDGEEDLRKKCKVAEQIRHLLKDDEEARNFMGANGFVEALMRFLE LAVRGRNEMAQEIGAMALFNLAVNNNRNKELMLASGVLPLLEEMIPNSNSHGSATALYLN LSCLEEAKPMISTSQAVPFLIHLLGAKTEPQCKLDALHALYNLSTHPANIPNLLAAGIIS GLHSLLTDPADNTWTEKTLAVFVNLASNKLGKDEIMVAPGLISGLATILDVGEAIEQEQA VVCLLILCNGSEKCSQMVLQEGVIPALVSISVNGTVRGKEKAQKLLMLFREQRQRDPSPV GSPHHTESSTEAVPGPESKPLESKALETKPLESKPYCKSISRRKVGKAWNYLWKSKNYSV YQC

Transcript Sequence

Transcript ID	VIT_01s0010g02890.t01
Transcript Infomation	cdna chromosome:12X:1:19925500:19929463:-1 gene:VIT_01s0010g02890 gene_biotype:protein_coding transcript_biotype:protein_coding description:RING-type E3 ubiquitin transferase [Source:UniProtKB/TrEMBL;Acc:F6HG65]
Sequence	ATGGATATTCATGAGGTTGAAGAGAGTTTGTTCGCGGTCAGTGATGCCAAGTTACATGGA GGGATGTGCAGGATGCTCTCCACGATTTATTGCAAAATACTGGAAATTTTCCCTGTTCTG GAAGCAGCAAGGCCTAGGAGCAAATCAGGTATTCAGGCATTATGCTCATTGCACATAGCG CTGGAGAAGGCCAAGAATATTCTTCAGCATTGCTCAGAATGTAGTAAACTTTATTTGGCT ATTACTGGTGATTCAGTGGCTTTAAAATTCGAGAAGGCACGATGTGCTCTTGCAGATAGT CTGAGGCGAGTTGAAGATATTGTTCCACAAACTATTGGTGTCCAGATTTCTGAGATAGTA AGTGAACTTGAGGGAACTGCATTCGCACTTGATCCATTGGAGAAGCAAGTTGGTGATGAT ATAATTGCATTGCTCCAGCAGGGCAGAAAATTCAACAACAGCAATGACAATAATGAGCTC GAGTCTTTTCACCAAGCTGCTTCTAGACTTGGTATCACCTCTTCAAGAGCAGCCCTTACA GAGAGAAGAGCTCTTAAGAAGCTCATAGAAAGAGCTCGTATTGAGGAAGACAAGCGGAAA GAATCAATTGTTGCTTATCTTTTACATCTCATGAGAAAATACTCTAAGTTATTTAGAAGT GAGTTATCAGATGACAATGATTCACAGGGTTCGGCTCCTTGTTCGCCGACTGTTATGGGT TCTCTTGAAGATGGTGTTGGACCTGCAGTCTATGGTCATGCCTTTGAGAGACAGCTCTCA AAACTTGGTTCTTTCAATTTCAAGCCAAATAATAGGAGATCTGGGCAGATGCCTCTTCCA CAAGAAGAGTTGAGGTGTCCAATATCATTGCAGCTCATGTATGATCCAGTGATAATATCT TCTGGGCAAACGTATGAAAGAATCTGCATTGAGAAATGGTTCAGTGATGGGCACAACACT TGCCCGAAAACTCAACAGCAGCTATCTCATCTTTGTCTAACTCCTAATTACTGTGTTAAG GGTCTCATTGCGAGCTGGTGTGAACAGAATGGAGTTCCTGTTCCTGATGGCCCTCCAGAG TCTCTTGATCTCAACTACTGGAGGCTCGCTTTGTCTGAGTGTGAGTCAACAAATTCGAAA TCAATGGACAGCATTGGTTCCTGCAAGATGAAGGGGGTAAAGGTGGTTCCTTTAGAGGAG AGTGGCATAATTGAGGAGGTCGAGGGAAATGAAATGGAAAATGTGCATGAACAGGATGAA GAGTCTGAAAACGTGTTTGAAAGATATGAGAACTTTCTGGCTATCTTGGATGGAGAGGAA GACTTGAGGAAAAAGTGCAAGGTGGCAGAACAGATCAGACACTTGCTAAAGGACGATGAG GAAGCCAGGAATTTTATGGGAGCTAATGGGTTTGTTGAAGCATTGATGCGCTTTTTAGAG TTGGCTGTGCGAGGAAGGAATGAAATGGCTCAGGAAATTGGGGCTATGGCTCTGTTCAAT CTTGCTGTTAACAATAACAGAAACAAGGAACTGATGTTGGCATCGGGAGTACTCCCATTG CTTGAGGAAATGATCCCCAATTCCAACTCCCATGGATCAGCTACAGCCCTCTACCTGAAC CTTTCTTGTCTTGAAGAAGCCAAGCCCATGATTAGCACAAGCCAAGCTGTCCCCTTTTTA ATCCATCTGCTTGGAGCTAAAACTGAACCGCAATGCAAGCTTGATGCCCTCCATGCCCTC TATAATCTCTCCACCCATCCTGCCAATATCCCCAACCTACTTGCAGCTGGCATTATCAGC GGCCTCCATTCCCTTCTCACAGACCCGGCTGACAACACATGGACAGAAAAAACCTTGGCT GTCTTTGTAAACTTGGCTTCAAATAAATTAGGAAAAGATGAAATCATGGTAGCCCCTGGC CTTATTAGTGGGTTGGCAACGATACTGGATGTTGGTGAGGCCATTGAGCAGGAGCAAGCT GTTGTCTGTCTTCTGATCTTATGTAATGGGAGTGAGAAATGCAGTCAGATGGTCCTCCAA GAAGGGGTGATACCTGCATTGGTTTCCATATCAGTGAATGGGACCGTGAGAGGGAAAGAA AAGGCTCAGAAACTTCTGATGCTGTTTCGGGAGCAGCGGCAGCGAGACCCATCACCTGTT GGGAGTCCTCATCATACTGAAAGCAGTACCGAGGCTGTGCCTGGTCCTGAATCAAAGCCA TTGGAATCAAAAGCGCTGGAAACAAAGCCATTGGAATCCAAGCCATATTGTAAATCGATC TCAAGAAGAAAAGTGGGAAAGGCTTGGAATTACTTGTGGAAGAGCAAGAACTATTCGGTT TACCAGTGTTGAAGTCACGTATTTCTCTGGTCAGTGTTGTAAATTTCTCTTGTATTTTGC TTTTGTCCTGTCCCCGTGGACGCTATTTATTTTTGGTTTTTCAAAGAGAAGAAGAGATGT ACAGGCCCCTGTAATC