Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_01s0010g02860.t01
CDS Infomation

cds chromosome:12X:1:19893107:19896199:1 gene:VIT_01s0010g02860 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGCCTTCAGCAACAACCGTTCTGTCAACATACAGCACCTTTGCTGCATCAGCAATGCTG
GTCCGGACGGTGTTCAGTGAAATTCAGACCACAGTCACCCAGATCATACCTCCAAAAATC
CGGGAGAAAATCTTGTCCAAGATTGGAAGCCTTCTTGGTAATCCCTCTTCTCAAATTACT
CTCATCTTTGATGATTACGATGGGTATGCGGTCAATCAAATGTACGAGGCTTGCAAAATC
TTCCTGCGTACAAAAATCCCTCCATCAGTTCAAAAGCTTAACGTTTTCCGAGCTCCAGAA
CGCCAGAACCTTTTAATCACCATTGGTGAAGGTGAAACGGCTATTGACATATTCGAAGGA
ATTCAGGTCAAATGGGAAATGGTTTGTACCAAGAAGAGGTCCATTGAAGGCGTAGATTAT
GAAGCAAGATCGATGGAGCTCAGTTTCCCTAAGAAAAACATGGATAGGATTCTGAGCTCT
TACTTGCCATATGTGGTGGAGAGATCAAAAGCCTTCATAGAAGAAAACAAGGTGCTGAAG
CTCTATTCATATGGTGGGTCATGGGAATCAACCAACCTCCACCATCCATCAACTTTTGAA
ACACTGGCAATGGATTCAAAGCTCAAGCAGGACTTGATAAATGACTTGGATCGATTTGTC
AAGAGAAAGAAGTACTATAAAAGAGTTGGAAGGGCATGGAAGAGAGGATATTTGTTGTAC
GGCCCTCCAGGCACTGGAAAGTCAAGCTTGATTGCAGCCATGGCCAACTATCTGAAATTT
GACATCTATGACTTAGAGCTCACTAGTCTCCGTTGCAACTCAGAGTTTAGAAGACTGTTA
GTCTCAACCACGAACCAATCAATACTTGTGATTGAAGATATTGACTGCAGCAGTGAGCTG
CGGAGCCAACAACCAGGAGGGCATAATCCCAATGACAGCCAGTTGCAGTTGACATTATCT
GGGTTGCTTAATTTCATTGATGGGCTGTGGTCAAGCTGTGGTGATGAGAGGATAATCGTG
CTCACAACTAATCACAAAGAAAGGCTAGATCCTGCATTGTTGAGACCGGGGCGCATGGAC
ATGCACATCCACATGTCCTACTGCACTCCCTGTGGATTCAAGACACTTGCGTCCAACTAC
CTAGGCATAAGAGATCACAGGTTGTTTCCTGAAATTGAAAAGCTGATAGTGGAGGTAGAG
GTGACCCCAGCAGCAATTGCAGAAGAGCTCATGAAAAGTGAAGAAGCTGACATTGCCCTT
GGAAGACTTGTTGAGTTCCTCACAAGGGTAAAGACGGCCCAAAATGAAGCAACTGATGGA
AAAGATAAAGAAGCAAACAAAAAGGGAAATGAAAGCCCAGTAGTTGATCAAAGTAAGAAG
AAAGCCAAAAGAAATAACCCGACAGCAAGGAATCAAAAAAGGAAGGCGATGAGGGTCGCG
CGAACGCGAACCCCCTCTACCACAAATTATGACGTAGACTCTGCCACTTGGGCAGATCTT
AGGTCAGTACCCCTCCTAAGTGCAATGGAGGTTACTTTGACATGCGGCCGATGTGGGATT
GGCATGTGGCATTCTGTAGTTAATCTTCACCTTATCATCCTGAACCGGCGGTTGGTTGTA
GCTCCGGTAAAGTCGCAGATTTTGTTTATTATGAGGCCGTAG

Peptide Sequence

PEP ID

VIT_01s0010g02860.t01
PEP Infomation

pep chromosome:12X:1:19893107:19896199:1 gene:VIT_01s0010g02860 transcript:VIT_01s0010g02860.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MPSATTVLSTYSTFAASAMLVRTVFSEIQTTVTQIIPPKIREKILSKIGSLLGNPSSQIT
LIFDDYDGYAVNQMYEACKIFLRTKIPPSVQKLNVFRAPERQNLLITIGEGETAIDIFEG
IQVKWEMVCTKKRSIEGVDYEARSMELSFPKKNMDRILSSYLPYVVERSKAFIEENKVLK
LYSYGGSWESTNLHHPSTFETLAMDSKLKQDLINDLDRFVKRKKYYKRVGRAWKRGYLLY
GPPGTGKSSLIAAMANYLKFDIYDLELTSLRCNSEFRRLLVSTTNQSILVIEDIDCSSEL
RSQQPGGHNPNDSQLQLTLSGLLNFIDGLWSSCGDERIIVLTTNHKERLDPALLRPGRMD
MHIHMSYCTPCGFKTLASNYLGIRDHRLFPEIEKLIVEVEVTPAAIAEELMKSEEADIAL
GRLVEFLTRVKTAQNEATDGKDKEANKKGNESPVVDQSKKKAKRNNPTARNQKRKAMRVA
RTRTPSTTNYDVDSATWADLRSVPLLSAMEVTLTCGRCGIGMWHSVVNLHLIILNRRLVV
APVKSQILFIMRP

Transcript Sequence

Transcript ID

VIT_01s0010g02860.t01
Transcript Infomation

cdna chromosome:12X:1:19893107:19896199:1 gene:VIT_01s0010g02860 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CAAACATATTTTCCCTGACAAGTATGCCTTCAGCAACAACCGTTCTGTCAACATACAGCA
CCTTTGCTGCATCAGCAATGCTGGTCCGGACGGTGTTCAGTGAAATTCAGACCACAGTCA
CCCAGATCATACCTCCAAAAATCCGGGAGAAAATCTTGTCCAAGATTGGAAGCCTTCTTG
GTAATCCCTCTTCTCAAATTACTCTCATCTTTGATGATTACGATGGGTATGCGGTCAATC
AAATGTACGAGGCTTGCAAAATCTTCCTGCGTACAAAAATCCCTCCATCAGTTCAAAAGC
TTAACGTTTTCCGAGCTCCAGAACGCCAGAACCTTTTAATCACCATTGGTGAAGGTGAAA
CGGCTATTGACATATTCGAAGGAATTCAGGTCAAATGGGAAATGGTTTGTACCAAGAAGA
GGTCCATTGAAGGCGTAGATTATGAAGCAAGATCGATGGAGCTCAGTTTCCCTAAGAAAA
ACATGGATAGGATTCTGAGCTCTTACTTGCCATATGTGGTGGAGAGATCAAAAGCCTTCA
TAGAAGAAAACAAGGTGCTGAAGCTCTATTCATATGGTGGGTCATGGGAATCAACCAACC
TCCACCATCCATCAACTTTTGAAACACTGGCAATGGATTCAAAGCTCAAGCAGGACTTGA
TAAATGACTTGGATCGATTTGTCAAGAGAAAGAAGTACTATAAAAGAGTTGGAAGGGCAT
GGAAGAGAGGATATTTGTTGTACGGCCCTCCAGGCACTGGAAAGTCAAGCTTGATTGCAG
CCATGGCCAACTATCTGAAATTTGACATCTATGACTTAGAGCTCACTAGTCTCCGTTGCA
ACTCAGAGTTTAGAAGACTGTTAGTCTCAACCACGAACCAATCAATACTTGTGATTGAAG
ATATTGACTGCAGCAGTGAGCTGCGGAGCCAACAACCAGGAGGGCATAATCCCAATGACA
GCCAGTTGCAGTTGACATTATCTGGGTTGCTTAATTTCATTGATGGGCTGTGGTCAAGCT
GTGGTGATGAGAGGATAATCGTGCTCACAACTAATCACAAAGAAAGGCTAGATCCTGCAT
TGTTGAGACCGGGGCGCATGGACATGCACATCCACATGTCCTACTGCACTCCCTGTGGAT
TCAAGACACTTGCGTCCAACTACCTAGGCATAAGAGATCACAGGTTGTTTCCTGAAATTG
AAAAGCTGATAGTGGAGGTAGAGGTGACCCCAGCAGCAATTGCAGAAGAGCTCATGAAAA
GTGAAGAAGCTGACATTGCCCTTGGAAGACTTGTTGAGTTCCTCACAAGGGTAAAGACGG
CCCAAAATGAAGCAACTGATGGAAAAGATAAAGAAGCAAACAAAAAGGGAAATGAAAGCC
CAGTAGTTGATCAAAGTAAGAAGAAAGCCAAAAGAAATAACCCGACAGCAAGGAATCAAA
AAAGGAAGGCGATGAGGGTCGCGCGAACGCGAACCCCCTCTACCACAAATTATGACGTAG
ACTCTGCCACTTGGGCAGATCTTAGGTCAGTACCCCTCCTAAGTGCAATGGAGGTTACTT
TGACATGCGGCCGATGTGGGATTGGCATGTGGCATTCTGTAGTTAATCTTCACCTTATCA
TCCTGAACCGGCGGTTGGTTGTAGCTCCGGTAAAGTCGCAGATTTTGTTTATTATGAGGC
CGTAG