Gene sequences

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Trait-Related Loci

Vitis vinifera

CDS Sequence

CDS ID	VIT_01s0010g02750.t01
CDS Infomation	cds chromosome:12X:1:19772899:19777638:-1 gene:VIT_01s0010g02750 gene_biotype:protein_coding transcript_biotype:protein_coding description:Lipoxygenase [Source:UniProtKB/TrEMBL;Acc:D7TAQ3]
Sequence	ATGCTCGGAGCTCAGCGCATAGCACCTGTCAACTCCGGTGTCGTCTGGCGAGCTCCGGCT CAGTTGGAGAGTAATGGAAGAGCCAGAAGAAGCTGGGTTCCAGGACACCGGTCGCCGGTG GCGGGAGCTCGGCCAATTCGGGCGGTGATCAGCAGTGAGGACAAGACTGTGGAAGGTGGT GCAAAGGCAGTGGAGAGCAAAGACGGTAATGTGTTGTTGTCGTCGTCGTCGTCTTCTTCT GCGAAGGGGATTGATGTGAGAGCGGTGATCACAATAAGGAAGAAGATGAAGGAGAAAATC ACTGAGAAGATTGAGGACCAGTGGGAAGGTTTCATGAATGGGATAGGACAAGGGATCTCG ATTCAGCTCGTCAGTGAAGAGATCGATCCTGTTACCATGTCAGGGAAGAGTGTGGAGTCT TTTGTACGAGGATGGTTGCCAAAGCCATCAAACCTTCCGTATATAGTTGAATATGCAGCA GACTTCACTGTCCCGTTAGACTTTGGATCCCCTGGAGCTGTTCTGATATCCAATCTTCAT GGCAAGGAGTTCCACTTAATGGAGATTGTTATTCATGGCTTTGATGAAGGACCCATATTC TTTCCTGCAAATTCTTGGATACATTCGCGGAAGGATAATCCTGAAAGCAGAATTATTTTC AGAAATCAGGCTTATTTACCATCACAAACACCACCTGGCCTCAAAGATCTCCGGCGTGAA GACTTACTGAGTCTCCGTGGCAATAGAAAAGGGGAGAGAAAGCCACATGATAGAATCTAT GATTACGCTCCTTATAATGACTTGGGGAATCCTGACAAGAGCGAGGATCTCGCTAGGCCT GTGCTAGCTGGTGAGGAAAGGCCATATCCCAGGCGCTGTAGAACTGGACGACCTCCAACC AGAACAGATCCATTGTGTGAGAGTAGATCAGAAAAGCCCCATCCTGTGTATGTACCTCGG GATGAAACTTTTGAGGAGATTAAACAGAACACTTTCTCAGCTGGAAGGTTGAAAGCTCTG CTCCACAATCTGATACCATCTATTGCTGCTACATTGTCAAGTTCAGACATTCCCTTCAAG TGTTTTTCCGATATTGACAAGCTATATAATGATGGTGTTCTCCTGAAGGATGAAGAAGAT CAAAAAATGTCTGGAAATGTGTTCCCCTCCAATATGATGAAACAAGTATTGAGTGTTGGA CAAAAGTTGTTGAAGTATGAAGTACCAGCTATTATCTCAAGGGATAGATTTGCATGGTTG CGGGATAATGAGTTTGCACGCCAAACTTTGGCTGGGGTCAACCCAGTGAATATCGAGATT CTAAAGGGATTTCCAATTGTAAGCAAACTAGATCCTGCAGTTTATGGCCCTCCGGAGTCG GCAATCACAAAAGAATTGATACAGCAAGAACTGAGTGGAATAACTGTTGAAGAGGCTATT GAGGACAAGAGATTGTTTATACTTGATTACCACGATATGCTTTTACCATTTATTGGGAAG ATGAACACCTTACCAGAGAGGCAAGCATATGCGTCTAGAACAGTTTTCTTCTATACACGG ACCGGCTTTTTGAGGCCAATTGCTATTGAGCTCTCACTTCCTCCAACACCTTCTTCACCT GGTAAGAAGCGTGTTTACACCCATGGACATGATGCTACAACCCATTGGATTTGGAAGCAA GCAAAAGCTCATGTTTGCTCGAATGATGCTGGTGTTCATCAACTAGTGAATCACTGGTTG AGGACTCATGCTTGCATGGAGCCTTATATAATTGCCACTCATAGGCAGCTTAGTGCAATG CACCCCATTAACAAGCTGCTCCGCCCTCATTTGCGCTACACATTAGAAATAAATGCACTA GCACGACAAAGTTTAATAAATGGAGGGGGAATTATTGAGGCTTGTTTCAGCCCGGGAAAG TATGCCATGGAGCTAAGCTCTGCTGCATACAAGAGTATGTGGCAATTTGACATGGAGGCA CTGCCAGCAGATTTAATTCGGAGGGGCATGGCGGTGGAGGATCCTTCAATGCCATGTGGT GTTAAACTCTTGATTGAAGACTACCCTTATGCTGCAGATGGGCTCCTAATATGGTCTGCC ATAAAAGAATGGGTAGAATCGTATGTTGATCACTTCTATTCTGAGCCTAACACTGTCACA TCTGATTTGGAGCTCCAAGCCTGGTGGAACGAGATCAAAAATGAGGGTCACTATGACAAG CGTAATGAGTCCTGGTGGCCTAAGCTCAACACTAAAGAGCACTTATCTGGCATACTTACT ACAATGATATGGATAGCTTCAGGTCAACATGCTGCAATAAACTTTGGGCAATACCCCTTT GGAGGATATGTGCCTAACCGTCCTACCCTCATGAGAAAACTCATCCCTCATGAAGATGAT TCTGCCTATGAGAAGTTTCTTCTAAACCCACAGTCAACTTTCCTCTCATCTTTGCCAACG CAACTTCAGGCCACCAAAGTGATGGCTGTTCAGGACACCCTGTCCACTCACTCCCCAGAT GAAGAGTATCTGGGTCAAACACACCATCTGCACAGCCACTGGATCAAGGATCCTGAAGTC TTGGACATGTTCAAGAAGTTCTCTGCTAAACTAGAGGAGATAGAGGAGATCATAAAAGGA AGAAATAAGAATATTCACCTTAAAAACAGAAATGGTGCCGGCATCCCTCCATATGAACTG CTTCTTCCCTCATCAGGTCCAGGGGTAACTGGCCGTGGTATTCCCAACAGCATTTCTATC TGA

Peptide Sequence

PEP ID	VIT_01s0010g02750.t01
PEP Infomation	pep chromosome:12X:1:19772899:19777638:-1 gene:VIT_01s0010g02750 transcript:VIT_01s0010g02750.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Lipoxygenase [Source:UniProtKB/TrEMBL;Acc:D7TAQ3]
Sequence	MLGAQRIAPVNSGVVWRAPAQLESNGRARRSWVPGHRSPVAGARPIRAVISSEDKTVEGG AKAVESKDGNVLLSSSSSSSAKGIDVRAVITIRKKMKEKITEKIEDQWEGFMNGIGQGIS IQLVSEEIDPVTMSGKSVESFVRGWLPKPSNLPYIVEYAADFTVPLDFGSPGAVLISNLH GKEFHLMEIVIHGFDEGPIFFPANSWIHSRKDNPESRIIFRNQAYLPSQTPPGLKDLRRE DLLSLRGNRKGERKPHDRIYDYAPYNDLGNPDKSEDLARPVLAGEERPYPRRCRTGRPPT RTDPLCESRSEKPHPVYVPRDETFEEIKQNTFSAGRLKALLHNLIPSIAATLSSSDIPFK CFSDIDKLYNDGVLLKDEEDQKMSGNVFPSNMMKQVLSVGQKLLKYEVPAIISRDRFAWL RDNEFARQTLAGVNPVNIEILKGFPIVSKLDPAVYGPPESAITKELIQQELSGITVEEAI EDKRLFILDYHDMLLPFIGKMNTLPERQAYASRTVFFYTRTGFLRPIAIELSLPPTPSSP GKKRVYTHGHDATTHWIWKQAKAHVCSNDAGVHQLVNHWLRTHACMEPYIIATHRQLSAM HPINKLLRPHLRYTLEINALARQSLINGGGIIEACFSPGKYAMELSSAAYKSMWQFDMEA LPADLIRRGMAVEDPSMPCGVKLLIEDYPYAADGLLIWSAIKEWVESYVDHFYSEPNTVT SDLELQAWWNEIKNEGHYDKRNESWWPKLNTKEHLSGILTTMIWIASGQHAAINFGQYPF GGYVPNRPTLMRKLIPHEDDSAYEKFLLNPQSTFLSSLPTQLQATKVMAVQDTLSTHSPD EEYLGQTHHLHSHWIKDPEVLDMFKKFSAKLEEIEEIIKGRNKNIHLKNRNGAGIPPYEL LLPSSGPGVTGRGIPNSISI

Transcript Sequence

Transcript ID	VIT_01s0010g02750.t01
Transcript Infomation	cdna chromosome:12X:1:19772899:19777638:-1 gene:VIT_01s0010g02750 gene_biotype:protein_coding transcript_biotype:protein_coding description:Lipoxygenase [Source:UniProtKB/TrEMBL;Acc:D7TAQ3]
Sequence	ATGCTCGGAGCTCAGCGCATAGCACCTGTCAACTCCGGTGTCGTCTGGCGAGCTCCGGCT CAGTTGGAGAGTAATGGAAGAGCCAGAAGAAGCTGGGTTCCAGGACACCGGTCGCCGGTG GCGGGAGCTCGGCCAATTCGGGCGGTGATCAGCAGTGAGGACAAGACTGTGGAAGGTGGT GCAAAGGCAGTGGAGAGCAAAGACGGTAATGTGTTGTTGTCGTCGTCGTCGTCTTCTTCT GCGAAGGGGATTGATGTGAGAGCGGTGATCACAATAAGGAAGAAGATGAAGGAGAAAATC ACTGAGAAGATTGAGGACCAGTGGGAAGGTTTCATGAATGGGATAGGACAAGGGATCTCG ATTCAGCTCGTCAGTGAAGAGATCGATCCTGTTACCATGTCAGGGAAGAGTGTGGAGTCT TTTGTACGAGGATGGTTGCCAAAGCCATCAAACCTTCCGTATATAGTTGAATATGCAGCA GACTTCACTGTCCCGTTAGACTTTGGATCCCCTGGAGCTGTTCTGATATCCAATCTTCAT GGCAAGGAGTTCCACTTAATGGAGATTGTTATTCATGGCTTTGATGAAGGACCCATATTC TTTCCTGCAAATTCTTGGATACATTCGCGGAAGGATAATCCTGAAAGCAGAATTATTTTC AGAAATCAGGCTTATTTACCATCACAAACACCACCTGGCCTCAAAGATCTCCGGCGTGAA GACTTACTGAGTCTCCGTGGCAATAGAAAAGGGGAGAGAAAGCCACATGATAGAATCTAT GATTACGCTCCTTATAATGACTTGGGGAATCCTGACAAGAGCGAGGATCTCGCTAGGCCT GTGCTAGCTGGTGAGGAAAGGCCATATCCCAGGCGCTGTAGAACTGGACGACCTCCAACC AGAACAGATCCATTGTGTGAGAGTAGATCAGAAAAGCCCCATCCTGTGTATGTACCTCGG GATGAAACTTTTGAGGAGATTAAACAGAACACTTTCTCAGCTGGAAGGTTGAAAGCTCTG CTCCACAATCTGATACCATCTATTGCTGCTACATTGTCAAGTTCAGACATTCCCTTCAAG TGTTTTTCCGATATTGACAAGCTATATAATGATGGTGTTCTCCTGAAGGATGAAGAAGAT CAAAAAATGTCTGGAAATGTGTTCCCCTCCAATATGATGAAACAAGTATTGAGTGTTGGA CAAAAGTTGTTGAAGTATGAAGTACCAGCTATTATCTCAAGGGATAGATTTGCATGGTTG CGGGATAATGAGTTTGCACGCCAAACTTTGGCTGGGGTCAACCCAGTGAATATCGAGATT CTAAAGGGATTTCCAATTGTAAGCAAACTAGATCCTGCAGTTTATGGCCCTCCGGAGTCG GCAATCACAAAAGAATTGATACAGCAAGAACTGAGTGGAATAACTGTTGAAGAGGCTATT GAGGACAAGAGATTGTTTATACTTGATTACCACGATATGCTTTTACCATTTATTGGGAAG ATGAACACCTTACCAGAGAGGCAAGCATATGCGTCTAGAACAGTTTTCTTCTATACACGG ACCGGCTTTTTGAGGCCAATTGCTATTGAGCTCTCACTTCCTCCAACACCTTCTTCACCT GGTAAGAAGCGTGTTTACACCCATGGACATGATGCTACAACCCATTGGATTTGGAAGCAA GCAAAAGCTCATGTTTGCTCGAATGATGCTGGTGTTCATCAACTAGTGAATCACTGGTTG AGGACTCATGCTTGCATGGAGCCTTATATAATTGCCACTCATAGGCAGCTTAGTGCAATG CACCCCATTAACAAGCTGCTCCGCCCTCATTTGCGCTACACATTAGAAATAAATGCACTA GCACGACAAAGTTTAATAAATGGAGGGGGAATTATTGAGGCTTGTTTCAGCCCGGGAAAG TATGCCATGGAGCTAAGCTCTGCTGCATACAAGAGTATGTGGCAATTTGACATGGAGGCA CTGCCAGCAGATTTAATTCGGAGGGGCATGGCGGTGGAGGATCCTTCAATGCCATGTGGT GTTAAACTCTTGATTGAAGACTACCCTTATGCTGCAGATGGGCTCCTAATATGGTCTGCC ATAAAAGAATGGGTAGAATCGTATGTTGATCACTTCTATTCTGAGCCTAACACTGTCACA TCTGATTTGGAGCTCCAAGCCTGGTGGAACGAGATCAAAAATGAGGGTCACTATGACAAG CGTAATGAGTCCTGGTGGCCTAAGCTCAACACTAAAGAGCACTTATCTGGCATACTTACT ACAATGATATGGATAGCTTCAGGTCAACATGCTGCAATAAACTTTGGGCAATACCCCTTT GGAGGATATGTGCCTAACCGTCCTACCCTCATGAGAAAACTCATCCCTCATGAAGATGAT TCTGCCTATGAGAAGTTTCTTCTAAACCCACAGTCAACTTTCCTCTCATCTTTGCCAACG CAACTTCAGGCCACCAAAGTGATGGCTGTTCAGGACACCCTGTCCACTCACTCCCCAGAT GAAGAGTATCTGGGTCAAACACACCATCTGCACAGCCACTGGATCAAGGATCCTGAAGTC TTGGACATGTTCAAGAAGTTCTCTGCTAAACTAGAGGAGATAGAGGAGATCATAAAAGGA AGAAATAAGAATATTCACCTTAAAAACAGAAATGGTGCCGGCATCCCTCCATATGAACTG CTTCTTCCCTCATCAGGTCCAGGGGTAACTGGCCGTGGTATTCCCAACAGCATTTCTATC TGATGGCATGAGCTGGTTTGTAAGTTCCGTCTTGTTGATTATAGATATAGTGATATTCAG TACATGCAAA