Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_01s0010g02160.t01
CDS Infomation

cds chromosome:12X:1:19145927:19153309:-1 gene:VIT_01s0010g02160 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGCAGCTGTGGCAAGAATGGAGGTTGTCCATCTGATTACATAGCCGTTGCCATATCC
CTCCTCTGCTTCATCCTGTTACTAATAAAAGCTACATTACCCTTTCTGGTTCACAAAGTT
CCTCGTCCTAAAGGCAGTGGCTTTTGGATTCCAGTGATTCAAGTTTTTGCCAGCCTCAAC
CTTCTGTTGTCGATTGTGATGTCCATCAATTTCCTGAAATTCAAGAAGAAGCATTGGTGG
CAGTCTTGTTATCTCTGGGCAGTCTGGGTTGAAGGCCCACTTGGGTTCGGTTTGCTGCTG
AGCTGTCGTATAGTGCAGGCATTTCAACTATATTACATATTTGTCAAGAGACGTTTACCA
CCTATCAGATCATATGTTTTTCTCCCAACAATTGTCTTGCCATGGATTGCCGGGGCTGCA
TTGCTTCATAAGAAGAAGCCTCTAAATGAACGATGTCACTTGGGGACTCGATGGATTATT
CCAGTTGTGCTCCTCCACACAACATATGTTGCTGCTTTGGTTGGTTTCACGGTGGCCATC
CGACATATAGAGTTCAGGTTTCACGAACTCAAAGACCTGTGGCGGGGAATACTTGTCTCC
ACTTCTTCTGTTGGACTATGGGTTACTGCTTACATTTTGAATGAAATCCATGATGATATC
GAATGGCTTCAAGTTACCTCTAGATTTCTGCTCTTAATTATGGCAAGTATTCTTGTACTG
GCTTTCTTTTCCATGTCAAGTTCACAACCTCTGCTCTCAAAAATGAGCTTGAGGAAAAGG
GAAGCCACAGAATTTGAGACAATGGGCCGTGCCCTGGGCATACCCGATAGTGGACTATTA
TTACAACGGGAACCAGCACCAGACATAGACCCTAACGAACCTCTGGATAAGCTTCTTCTG
AACAAAGGGTTCCGTCAGTCCTTCATGGCATTTGCTGACAGTTGTTTGGCTGGGGAGAGT
GTGCATTTTTATGATGAAGTGCATGAACTTGCTAAAATACCTGTGGATGACCCAGTGAGA
AGAATCTACATGGCACGGCACATTATTGAGAAGTATGTAATTGCAGGTGCAACAATGGAG
GTAAACATATCTCACCGGAACCGGCAAGAAATCTTGACAACTCCTGATCTGGCACACCCT
GATCTTTTCAACAATGCCCTGAATGAATTGCTGCAGTTGATGAAAATGAACCTGGCAAAG
GATTACTGGTCGTCCATGTTCTTCAAAAAGTTGAGAGAAGATGGCACAGGATCGAATGGG
CATGAGCTGGAAGTGGTGACGGGCTGGAACTACTCTCCTAGATTGAGCTGTGTACATGGT
GAAGATGATCCTTTCCACGAAGAACATCCTTCAAAAAGCTCTGCCCATGATACTAATACC
CAGGATGTAGAGCAGCAATGA

Peptide Sequence

PEP ID

VIT_01s0010g02160.t01
PEP Infomation

pep chromosome:12X:1:19145927:19153309:-1 gene:VIT_01s0010g02160 transcript:VIT_01s0010g02160.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MGSCGKNGGCPSDYIAVAISLLCFILLLIKATLPFLVHKVPRPKGSGFWIPVIQVFASLN
LLLSIVMSINFLKFKKKHWWQSCYLWAVWVEGPLGFGLLLSCRIVQAFQLYYIFVKRRLP
PIRSYVFLPTIVLPWIAGAALLHKKKPLNERCHLGTRWIIPVVLLHTTYVAALVGFTVAI
RHIEFRFHELKDLWRGILVSTSSVGLWVTAYILNEIHDDIEWLQVTSRFLLLIMASILVL
AFFSMSSSQPLLSKMSLRKREATEFETMGRALGIPDSGLLLQREPAPDIDPNEPLDKLLL
NKGFRQSFMAFADSCLAGESVHFYDEVHELAKIPVDDPVRRIYMARHIIEKYVIAGATME
VNISHRNRQEILTTPDLAHPDLFNNALNELLQLMKMNLAKDYWSSMFFKKLREDGTGSNG
HELEVVTGWNYSPRLSCVHGEDDPFHEEHPSKSSAHDTNTQDVEQQ

Transcript Sequence

Transcript ID

VIT_01s0010g02160.t01
Transcript Infomation

cdna chromosome:12X:1:19145927:19153309:-1 gene:VIT_01s0010g02160 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ACGCATTTGGTCAAACAAATGAGGCTCATCGTAACTGTGAATGATAAAAAAAATTTCCAT
AGTTCACAGGTGGATGATAAATTGATTATACAAGCTGTAGGTTGATAGTACAGAGGTGCC
ACATGCAATGGGCAGCTGTGGCAAGAATGGAGGTTGTCCATCTGATTACATAGCCGTTGC
CATATCCCTCCTCTGCTTCATCCTGTTACTAATAAAAGCTACATTACCCTTTCTGGTTCA
CAAAGTTCCTCGTCCTAAAGGCAGTGGCTTTTGGATTCCAGTGATTCAAGTTTTTGCCAG
CCTCAACCTTCTGTTGTCGATTGTGATGTCCATCAATTTCCTGAAATTCAAGAAGAAGCA
TTGGTGGCAGTCTTGTTATCTCTGGGCAGTCTGGGTTGAAGGCCCACTTGGGTTCGGTTT
GCTGCTGAGCTGTCGTATAGTGCAGGCATTTCAACTATATTACATATTTGTCAAGAGACG
TTTACCACCTATCAGATCATATGTTTTTCTCCCAACAATTGTCTTGCCATGGATTGCCGG
GGCTGCATTGCTTCATAAGAAGAAGCCTCTAAATGAACGATGTCACTTGGGGACTCGATG
GATTATTCCAGTTGTGCTCCTCCACACAACATATGTTGCTGCTTTGGTTGGTTTCACGGT
GGCCATCCGACATATAGAGTTCAGGTTTCACGAACTCAAAGACCTGTGGCGGGGAATACT
TGTCTCCACTTCTTCTGTTGGACTATGGGTTACTGCTTACATTTTGAATGAAATCCATGA
TGATATCGAATGGCTTCAAGTTACCTCTAGATTTCTGCTCTTAATTATGGCAAGTATTCT
TGTACTGGCTTTCTTTTCCATGTCAAGTTCACAACCTCTGCTCTCAAAAATGAGCTTGAG
GAAAAGGGAAGCCACAGAATTTGAGACAATGGGCCGTGCCCTGGGCATACCCGATAGTGG
ACTATTATTACAACGGGAACCAGCACCAGACATAGACCCTAACGAACCTCTGGATAAGCT
TCTTCTGAACAAAGGGTTCCGTCAGTCCTTCATGGCATTTGCTGACAGTTGTTTGGCTGG
GGAGAGTGTGCATTTTTATGATGAAGTGCATGAACTTGCTAAAATACCTGTGGATGACCC
AGTGAGAAGAATCTACATGGCACGGCACATTATTGAGAAGTATGTAATTGCAGGTGCAAC
AATGGAGGTAAACATATCTCACCGGAACCGGCAAGAAATCTTGACAACTCCTGATCTGGC
ACACCCTGATCTTTTCAACAATGCCCTGAATGAATTGCTGCAGTTGATGAAAATGAACCT
GGCAAAGGATTACTGGTCGTCCATGTTCTTCAAAAAGTTGAGAGAAGATGGCACAGGATC
GAATGGGCATGAGCTGGAAGTGGTGACGGGCTGGAACTACTCTCCTAGATTGAGCTGTGT
ACATGGTGAAGATGATCCTTTCCACGAAGAACATCCTTCAAAAAGCTCTGCCCATGATAC
TAATACCCAGGATGTAGAGCAGCAATGAGCTGAAGTATCAACAATTGAATTTCCCAGTTT
TGGTGGAAAATTCGTCATATGTTAATTAAATTCTTATAAAAAACACACAGCTCTTGTAAG
AGATGGTGGTTGAGAGTTTATTGTTAGACCCAATCATAATTTATAGCTAACCAACCATAT
ATGGACGTTTCTTTGATTAATTGTTTCTAAAATAAAAAATTATTTTACTTT