Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_01s0010g02050.t01
CDS Infomation

cds chromosome:12X:1:18753620:18764408:-1 gene:VIT_01s0010g02050 gene_biotype:protein_coding transcript_biotype:protein_coding description:UBX domain-containing protein [Source:UniProtKB/TrEMBL;Acc:D7TAI6]
Sequence

ATGGAGAGCATTCTCTCAGCTGACAAGCAAAGCATGGTCTCCTCCTTTCTGGAGATTGCC
GTGGGTCAGTCCGCCGACACAGCTAGGCAGTTCTTGCAGGCTACAAGCTGGAAACTAGAG
GAAGCTATTCAGCTGTTCTATGTTGGGAATGAAGGTGGAACCATGGCTGCGTCTTCATAT
TCTCCACCAATTGAAAATATTAGTCCCCTGCCTGATCAAAGTTCAAGTGGATCAAGAAAG
GACATTGAAAATGAAAATGTTGTACAAGATGATGGAGATGAAGTACGGCCTCCATTACCG
GTGATAAGGGAGGCTCTTTATGACGATGCTATGTTGTATGGAGTATCAAGAGGAGGATAT
CCTTCACATGAAGCAAGTTCTTTAGTTGCATTCCGTAATTTTGATGATGAGATGAAACGC
CCAGGGATTTGGGAATCAGAAAAAGGTGCTACATCTACGGCAGAAAATTCTCGAGATAAT
CTTGCTTCGTTATATCGGCCTCCATTTGCTTTAATGCACCATGGACCTTTTGAAAAGGCA
AAAGTTGCTGCTGCAGGTCAGGATAAATGGCTCCTGGTAAACTTGCAATCCACCACAGAA
TTCAGCTCACATATGCTTAATCGGGATACATGGGCAAATGAAGCTGTGGCGCAAACTATT
AGTACAAATTTCATCTTCTGGCAGGTATATGATGATACAAGTGAGGGCAAGAAAGTCTGC
ACCTACTACAAATTGGATTCTATTCCTGTGGTTCTTGTGATTGACCCCATCACAGGCCAA
AAGATGCGCTCATGGTGTGGAATGATTCAACCAGAGCGTTTGCTGGAGGATCTATTACCA
TTCATGGATGGTGGCCCCAAGGATCATCACGTCACTCTATCTCATAAACGTCCAAGAGAA
AGCTCTCTGACTCCTCCCCAGAAAATTCAAGTGGCTGCAGATGAAACTAATGAAGAAGAT
GAGGAAGTGCAATTGGCATTGGCAGCCTCTATGGCAAGCATGAAAGACCCTAGTGGATTG
ACTTCCAAGGAAAAAGATGTAACCACTACTGACAAGAAGGAAGAGATGTGTTCAGCTAAG
AAGCCTGAATATCCTCCTCTGCCCGAAGAACCCAAGGGTGATAGGAACCTTCTTTGCAGG
GTTGGAGTCCGTCTCCCAGATGGCCGCCGGATCCAGAGAAATTTCTTACGTACTGACCCA
ATACAGTTGCTTTGGTCGTTCTGCTATTCTCAACTTGAGGAAGTGGTTTCACGGCCGTTC
CACTTGACCCAGGCAATACCAGGTGCTTCACAGAATCTGGACTATGATAGAGAATTAACC
TTTGAAGAGTCAGGACTTGCAAACTCTATGATCTCGGTTACATGGGAATGA

Peptide Sequence

PEP ID

VIT_01s0010g02050.t01
PEP Infomation

pep chromosome:12X:1:18753620:18764408:-1 gene:VIT_01s0010g02050 transcript:VIT_01s0010g02050.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:UBX domain-containing protein [Source:UniProtKB/TrEMBL;Acc:D7TAI6]
Sequence

MESILSADKQSMVSSFLEIAVGQSADTARQFLQATSWKLEEAIQLFYVGNEGGTMAASSY
SPPIENISPLPDQSSSGSRKDIENENVVQDDGDEVRPPLPVIREALYDDAMLYGVSRGGY
PSHEASSLVAFRNFDDEMKRPGIWESEKGATSTAENSRDNLASLYRPPFALMHHGPFEKA
KVAAAGQDKWLLVNLQSTTEFSSHMLNRDTWANEAVAQTISTNFIFWQVYDDTSEGKKVC
TYYKLDSIPVVLVIDPITGQKMRSWCGMIQPERLLEDLLPFMDGGPKDHHVTLSHKRPRE
SSLTPPQKIQVAADETNEEDEEVQLALAASMASMKDPSGLTSKEKDVTTTDKKEEMCSAK
KPEYPPLPEEPKGDRNLLCRVGVRLPDGRRIQRNFLRTDPIQLLWSFCYSQLEEVVSRPF
HLTQAIPGASQNLDYDRELTFEESGLANSMISVTWE

Transcript Sequence

Transcript ID

VIT_01s0010g02050.t01
Transcript Infomation

cdna chromosome:12X:1:18753620:18764408:-1 gene:VIT_01s0010g02050 gene_biotype:protein_coding transcript_biotype:protein_coding description:UBX domain-containing protein [Source:UniProtKB/TrEMBL;Acc:D7TAI6]
Sequence

CTTTCCAGAGTGTCCTCCCGTATCTCTTTCCATCTCTAACCCTAGAAAATCCTTCAGCAT
CGATTGGGGTTCAATCGGTTATCGATTAGGATTTTGGTTTGAGAATCTCTGGAAGATGGA
GAGCATTCTCTCAGCTGACAAGCAAAGCATGGTCTCCTCCTTTCTGGAGATTGCCGTGGG
TCAGTCCGCCGACACAGCTAGGCAGTTCTTGCAGGCTACAAGCTGGAAACTAGAGGAAGC
TATTCAGCTGTTCTATGTTGGGAATGAAGGTGGAACCATGGCTGCGTCTTCATATTCTCC
ACCAATTGAAAATATTAGTCCCCTGCCTGATCAAAGTTCAAGTGGATCAAGAAAGGACAT
TGAAAATGAAAATGTTGTACAAGATGATGGAGATGAAGTACGGCCTCCATTACCGGTGAT
AAGGGAGGCTCTTTATGACGATGCTATGTTGTATGGAGTATCAAGAGGAGGATATCCTTC
ACATGAAGCAAGTTCTTTAGTTGCATTCCGTAATTTTGATGATGAGATGAAACGCCCAGG
GATTTGGGAATCAGAAAAAGGTGCTACATCTACGGCAGAAAATTCTCGAGATAATCTTGC
TTCGTTATATCGGCCTCCATTTGCTTTAATGCACCATGGACCTTTTGAAAAGGCAAAAGT
TGCTGCTGCAGGTCAGGATAAATGGCTCCTGGTAAACTTGCAATCCACCACAGAATTCAG
CTCACATATGCTTAATCGGGATACATGGGCAAATGAAGCTGTGGCGCAAACTATTAGTAC
AAATTTCATCTTCTGGCAGGTATATGATGATACAAGTGAGGGCAAGAAAGTCTGCACCTA
CTACAAATTGGATTCTATTCCTGTGGTTCTTGTGATTGACCCCATCACAGGCCAAAAGAT
GCGCTCATGGTGTGGAATGATTCAACCAGAGCGTTTGCTGGAGGATCTATTACCATTCAT
GGATGGTGGCCCCAAGGATCATCACGTCACTCTATCTCATAAACGTCCAAGAGAAAGCTC
TCTGACTCCTCCCCAGAAAATTCAAGTGGCTGCAGATGAAACTAATGAAGAAGATGAGGA
AGTGCAATTGGCATTGGCAGCCTCTATGGCAAGCATGAAAGACCCTAGTGGATTGACTTC
CAAGGAAAAAGATGTAACCACTACTGACAAGAAGGAAGAGATGTGTTCAGCTAAGAAGCC
TGAATATCCTCCTCTGCCCGAAGAACCCAAGGGTGATAGGAACCTTCTTTGCAGGGTTGG
AGTCCGTCTCCCAGATGGCCGCCGGATCCAGAGAAATTTCTTACGTACTGACCCAATACA
GTTGCTTTGGTCGTTCTGCTATTCTCAACTTGAGGAAGTGGTTTCACGGCCGTTCCACTT
GACCCAGGCAATACCAGGTGCTTCACAGAATCTGGACTATGATAGAGAATTAACCTTTGA
AGAGTCAGGACTTGCAAACTCTATGATCTCGGTTACATGGGAATGAAGATGGGGGTGTGG
GTACTGTTTTACTGAGTTGCTTCAACTGCTAGAGTCTGCATTGAAGAATTTTGGTTCAAA
CTGTTCTTTATTTCTTTCTTTCTCTGTAAGTAGAGACTTTGTTTAAATGGATGGATGGGG
GTGTTTGGACCAGAAACTTAATATTTGACATTTTGTTTACTGTATATACTCCATGTCAGG
GGCATGGGATTTGTACTTACTTTATATTAAAGTTATTTTGCACTTTTGCAAATTTGTTGA
TTAA