Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_01s0010g01680.t01
CDS Infomation

cds chromosome:12X:1:18012145:18021582:-1 gene:VIT_01s0010g01680 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAAGATTATTATCGAGTAGAGCGATCGCAGTCCTTAACGGAGAACTTGCCAGCAATT
GGTAAATACATCCGAGACCGGAGCAATAGCTTATCGGCGGCAATCGTCAAGCGGATATCG
TCTTTCAAAGAGAGCGATGAATCGAAATCGAAGTGGAATAATGTGACAGAGTTCAATCTC
TCGGGACTCAAGGTGATCGTGAAGCAGAAGGATGAAAACAGAGACTTCGCGCTCAAAGGT
CGAATCAGTTTTTTTTCCAGATCGAATTGCAGGGACTGTACTGCGGTTCGATTGTTCTTC
AGAGAGAAAGGTCTTAAATTCGTGGAAATCAACGTCGATGTGTATCCGTCGAGAGAGAAA
GAGCTGATGGAAAGAACTGGGACGTCGTCCGTACCACAGATTTTCTTCAACGAGAAGTTC
TTTGGAGGTCTGGTGGCTCTGAATTCGCTTCGGAACAGCGGGGACTTTGACCGTAGGCTG
ACGGAGATGCTCGGGAGGAAATGCCCCGACGACGCCCCAGCACCACCGGTGTACGGTTTC
GACGATTACGAGGAAGATACCACCGACGAGATGATCGCGATAGTTAGGGTTTTGCGGCAA
AGACTGCCAATTCAAGACCGTCTGATGAAGATGAAAATCGTGAACAACTGCTTCGCCGGC
GCTGAGATGCTGGAGGTGATGATTCAGCACTTCGATTGCGGCAGGAAGAAGGCCATTGAG
ATTGGGAAGCAGTTGGCTAGGAAGCACTTCATCCATCATGTCTTCAGGGAACATGATTTT
GAGGCTGGAAATCATTTCTACCGTTTCCTTGAGCATGAGCCTTTTATTCCTAGATGTATC
AATTTTCGGGGATCAACAAATGACAGTGAGCCCAAAACCGCTGCTGCAGTTGGCCAAAGG
CTCACCAAGATAATGTCCGCAATTCTTGAGTCTTACACCTCTGATGACAGGCGCCATGTT
GATTATATGGGAATTAGCAACAGTGAGGAATTCCGGAGATATGTAAATTTGGTTCAGGAT
CTTCACCGGGTAGACATCCTAGCACTCTCAACAGATGAGAAACTGGCCTTCTTCTTGAAC
CTGTACAATGCCATGGTCATCCATGCAGTGATTAGAGGAGGGCGTCCAAATGGGGTCATT
GACAGGAGATCCTTCTTTTCTGACTTCCAGTACCTTGTAGGAGGCAATGTCTACTCCCTC
AACATAATTAAAAACGGGATCCTCAGAAATAATCGGAGATCACCATACTCCTTAATGAAA
CCCTTCAGCAATGCTGACAAGCGCATAGAGCTGGCCCTTCCAAAAGTGAATCCATTAATC
CATTTTGGACTCTGCAATGGAACAAGATCAAGCCCCTCGGTCAGGTTCTTCTCACCCAAA
GGGGTTGAAGCAGAACTAAGATGCGCTGCAAGAGAGTTCTTCCAGAGGGACGGGATAGAG
GTGGACTTGGACAAAAGGACAGTCCATCTTAGCCGGACCCTCAAGTGGTTCAATGCAGAT
TTTGGACAAGAGAAAGAGGTCCTCAAGTGGATCATGGATTACTTGGATGCAACTAAAGCA
GGTCTGTTAACTCATCTGTTGAGCGATGGAGGAGCCGTTAATGTGGCATACCACAATTAT
GATTGGTCCGTGAATTCCTGA

Peptide Sequence

PEP ID

VIT_01s0010g01680.t01
PEP Infomation

pep chromosome:12X:1:18012145:18021582:-1 gene:VIT_01s0010g01680 transcript:VIT_01s0010g01680.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MEDYYRVERSQSLTENLPAIGKYIRDRSNSLSAAIVKRISSFKESDESKSKWNNVTEFNL
SGLKVIVKQKDENRDFALKGRISFFSRSNCRDCTAVRLFFREKGLKFVEINVDVYPSREK
ELMERTGTSSVPQIFFNEKFFGGLVALNSLRNSGDFDRRLTEMLGRKCPDDAPAPPVYGF
DDYEEDTTDEMIAIVRVLRQRLPIQDRLMKMKIVNNCFAGAEMLEVMIQHFDCGRKKAIE
IGKQLARKHFIHHVFREHDFEAGNHFYRFLEHEPFIPRCINFRGSTNDSEPKTAAAVGQR
LTKIMSAILESYTSDDRRHVDYMGISNSEEFRRYVNLVQDLHRVDILALSTDEKLAFFLN
LYNAMVIHAVIRGGRPNGVIDRRSFFSDFQYLVGGNVYSLNIIKNGILRNNRRSPYSLMK
PFSNADKRIELALPKVNPLIHFGLCNGTRSSPSVRFFSPKGVEAELRCAAREFFQRDGIE
VDLDKRTVHLSRTLKWFNADFGQEKEVLKWIMDYLDATKAGLLTHLLSDGGAVNVAYHNY
DWSVNS

Transcript Sequence

Transcript ID

VIT_01s0010g01680.t01
Transcript Infomation

cdna chromosome:12X:1:18012145:18021582:-1 gene:VIT_01s0010g01680 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TCTTTTGACTCCTTCTCCTCTCTCGATTCCCTCCAATTCTCCTCCATTTAATCTCTCCGA
TTTCTCCGTTCCCCTCCATTGCTTTCTTCGCTTTGGGTTTCGGCAGTTTTGTCGTTTTTT
TTCTCATTTCTGATTTTATTTCCTAAATTTTTTCATTTTTTTTTTTGGCGGAAATGGGTT
CACTGAACGGAGATGGTATCGCTGGCTATGACATGGCTGGAGAATATGAAAGAAAGGGCG
AGAAAAATAGTAAAGAGGATATTTCAGGTGGATACGTTTGCGAAAATTTCTCCAGTTCCG
AGATTTTCTCAGACGGGGGAGGTTTGATTTCCGATGATAGTGGAAAACAGGAAGCAAAGC
GATGTCCGTTGGATATGATAAAAGATTCACAGGAAGCTATGGAATTGGATCAACAATTCT
CTGAAATCGAGATCGAGAAGAGACACGTACCTGTTGAAGATCGTCAGGACATGTCTATAA
TGACGGAAAATTTGAATGAAGTTCAGAATGTTCCATTAGAGGACCTTGGCTCCGGTGCTG
ATACAGCCGTTAGCTCCGAAACCAACGGCGATGAACAGATCATTCCTCCTCATTCGCAGC
TACCAAAGCCAGAGGCACCACCGGGACTCTTGAATCCTCCATCGATGGAAGATTATTATC
GAGTAGAGCGATCGCAGTCCTTAACGGAGAACTTGCCAGCAATTGGTAAATACATCCGAG
ACCGGAGCAATAGCTTATCGGCGGCAATCGTCAAGCGGATATCGTCTTTCAAAGAGAGCG
ATGAATCGAAATCGAAGTGGAATAATGTGACAGAGTTCAATCTCTCGGGACTCAAGGTGA
TCGTGAAGCAGAAGGATGAAAACAGAGACTTCGCGCTCAAAGGTCGAATCAGTTTTTTTT
CCAGATCGAATTGCAGGGACTGTACTGCGGTTCGATTGTTCTTCAGAGAGAAAGGTCTTA
AATTCGTGGAAATCAACGTCGATGTGTATCCGTCGAGAGAGAAAGAGCTGATGGAAAGAA
CTGGGACGTCGTCCGTACCACAGATTTTCTTCAACGAGAAGTTCTTTGGAGGTCTGGTGG
CTCTGAATTCGCTTCGGAACAGCGGGGACTTTGACCGTAGGCTGACGGAGATGCTCGGGA
GGAAATGCCCCGACGACGCCCCAGCACCACCGGTGTACGGTTTCGACGATTACGAGGAAG
ATACCACCGACGAGATGATCGCGATAGTTAGGGTTTTGCGGCAAAGACTGCCAATTCAAG
ACCGTCTGATGAAGATGAAAATCGTGAACAACTGCTTCGCCGGCGCTGAGATGCTGGAGG
TGATGATTCAGCACTTCGATTGCGGCAGGAAGAAGGCCATTGAGATTGGGAAGCAGTTGG
CTAGGAAGCACTTCATCCATCATGTCTTCAGGGAACATGATTTTGAGGCTGGAAATCATT
TCTACCGTTTCCTTGAGCATGAGCCTTTTATTCCTAGATGTATCAATTTTCGGGGATCAA
CAAATGACAGTGAGCCCAAAACCGCTGCTGCAGTTGGCCAAAGGCTCACCAAGATAATGT
CCGCAATTCTTGAGTCTTACACCTCTGATGACAGGCGCCATGTTGATTATATGGGAATTA
GCAACAGTGAGGAATTCCGGAGATATGTAAATTTGGTTCAGGATCTTCACCGGGTAGACA
TCCTAGCACTCTCAACAGATGAGAAACTGGCCTTCTTCTTGAACCTGTACAATGCCATGG
TCATCCATGCAGTGATTAGAGGAGGGCGTCCAAATGGGGTCATTGACAGGAGATCCTTCT
TTTCTGACTTCCAGTACCTTGTAGGAGGCAATGTCTACTCCCTCAACATAATTAAAAACG
GGATCCTCAGAAATAATCGGAGATCACCATACTCCTTAATGAAACCCTTCAGCAATGCTG
ACAAGCGCATAGAGCTGGCCCTTCCAAAAGTGAATCCATTAATCCATTTTGGACTCTGCA
ATGGAACAAGATCAAGCCCCTCGGTCAGGTTCTTCTCACCCAAAGGGGTTGAAGCAGAAC
TAAGATGCGCTGCAAGAGAGTTCTTCCAGAGGGACGGGATAGAGGTGGACTTGGACAAAA
GGACAGTCCATCTTAGCCGGACCCTCAAGTGGTTCAATGCAGATTTTGGACAAGAGAAAG
AGGTCCTCAAGTGGATCATGGATTACTTGGATGCAACTAAAGCAGGTCTGTTAACTCATC
TGTTGAGCGATGGAGGAGCCGTTAATGTGGCATACCACAATTATGATTGGTCCGTGAATT
CCTGAATTCCCAAATTGATCCCTAGTTCATTCTCATGGTTTGGACATGGCAGTGTGTGAA
GCATTTATAATAGGAGTGCCTACACTGGTGAGATTGATCTTCTTTATTATGTAAATATTG
TAGATTTTGAAAACCCTGATCATTGTGGCCCTAAGAAGAGGCTTCAGAAGTTGAAAGAAA
GTATATTTTATATTTTTTCCTTTTAGGCATTATAATCCTAGTGTCTGTTTTTCTTTCTTT
CATTTTTTTTCCCGGTTGTAGAGAAGGCGTGTATCTTGGTTGAGTTTGAGGAAACTAGCT
CCAACCCAACTCAATGTTTGGGCTTATTGAGTGGATTTGA