Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_01s0010g01670.t01
CDS Infomation

cds chromosome:12X:1:18001134:18011069:-1 gene:VIT_01s0010g01670 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAGAAATCAGGAGCGGCGCCCACCGGTTGCTACAAGTGTGGCCGCCCTGGCCACTGG
TCACGTGACTGCCCTTCCTCTAACACTAACCCTAATCCTAACCCTAACCCGAACCCTAAT
TCTCAAAACCAATACTCCTCCTTTAACAAAGGCACTGCCTCCAAGCCGCTAGCCAAATCC
TCCGAGAAGCCCAAAAAGGCCCCGAGAACAAGACCCAATCTCACTCCCGAGCTTCTTCTC
TCCGACAATGGCCTCGGTTACGTCCTCCGCCACTTCCCTGGCGCTTTTAAGTTTCGCGGC
CGCGGACATGAGGTTAGTGACTTGGGGAACCTGATTGGCTTGTACTCTGAATGGCACTCT
CATTTGCTTCCGTACTACTCATTTGATCAATTTGTGCACAAGGTGGAAAAAGTGGGCACA
ACAAAACGTGTGAAGATATGTATCAGAGAGTTGAGAGAGAGAGTCGAAAATGGAGGTGAT
CTGACAAAGTTCCATGAACCACCTGTTGAACATGAAGATTGCCCAAATCATGATCAAGGG
CTTCCAGCTACTGAAGAAGTTATGAACTCAGTGGATCCAAGCCATTATCAGGGAGATACA
TCTTTAAACCATGAGGATGTACAAGAGGACATGCTTCATGAGGTTTATAGGAGTGCTACT
GAAGAACCATCTCAAACCTTGGCCAGTGACATGGTTGCTGGGGATGTACCTTCTGAAGGT
AGCTCCAAGAAAGAATTACCAAATCAAGTTCCTGAGAATGGACCTATTCGCTCTGATATT
CAGATCACAGAAGAGCAAAAAGCTCGAATGGAAGCTAACAGGCAGAAGGCACTGGAGAGA
GCTGCAGCCCGGGTCCGTTTGCAGCAGGCAGTCTAA

Peptide Sequence

PEP ID

VIT_01s0010g01670.t01
PEP Infomation

pep chromosome:12X:1:18001134:18011069:-1 gene:VIT_01s0010g01670 transcript:VIT_01s0010g01670.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MEKSGAAPTGCYKCGRPGHWSRDCPSSNTNPNPNPNPNPNSQNQYSSFNKGTASKPLAKS
SEKPKKAPRTRPNLTPELLLSDNGLGYVLRHFPGAFKFRGRGHEVSDLGNLIGLYSEWHS
HLLPYYSFDQFVHKVEKVGTTKRVKICIRELRERVENGGDLTKFHEPPVEHEDCPNHDQG
LPATEEVMNSVDPSHYQGDTSLNHEDVQEDMLHEVYRSATEEPSQTLASDMVAGDVPSEG
SSKKELPNQVPENGPIRSDIQITEEQKARMEANRQKALERAAARVRLQQAV

Transcript Sequence

Transcript ID

VIT_01s0010g01670.t01
Transcript Infomation

cdna chromosome:12X:1:18001134:18011069:-1 gene:VIT_01s0010g01670 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AGACGAGGCTAATCGGATATGGAGAAATCAGGAGCGGCGCCCACCGGTTGCTACAAGTGT
GGCCGCCCTGGCCACTGGTCACGTGACTGCCCTTCCTCTAACACTAACCCTAATCCTAAC
CCTAACCCGAACCCTAATTCTCAAAACCAATACTCCTCCTTTAACAAAGGCACTGCCTCC
AAGCCGCTAGCCAAATCCTCCGAGAAGCCCAAAAAGGCCCCGAGAACAAGACCCAATCTC
ACTCCCGAGCTTCTTCTCTCCGACAATGGCCTCGGTTACGTCCTCCGCCACTTCCCTGGC
GCTTTTAAGTTTCGCGGCCGCGGACATGAGGTTAGTGACTTGGGGAACCTGATTGGCTTG
TACTCTGAATGGCACTCTCATTTGCTTCCGTACTACTCATTTGATCAATTTGTGCACAAG
GTGGAAAAAGTGGGCACAACAAAACGTGTGAAGATATGTATCAGAGAGTTGAGAGAGAGA
GTCGAAAATGGAGGTGATCTGACAAAGTTCCATGAACCACCTGTTGAACATGAAGATTGC
CCAAATCATGATCAAGGGCTTCCAGCTACTGAAGAAGTTATGAACTCAGTGGATCCAAGC
CATTATCAGGGAGATACATCTTTAAACCATGAGGATGTACAAGAGGACATGCTTCATGAG
GTTTATAGGAGTGCTACTGAAGAACCATCTCAAACCTTGGCCAGTGACATGGTTGCTGGG
GATGTACCTTCTGAAGGTAGCTCCAAGAAAGAATTACCAAATCAAGTTCCTGAGAATGGA
CCTATTCGCTCTGATATTCAGATCACAGAAGAGCAAAAAGCTCGAATGGAAGCTAACAGG
CAGAAGGCACTGGAGAGAGCTGCAGCCCGGGTCCGTTTGCAGCAGGCAGTCTAA