Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_01s0010g01100.t01
CDS Infomation

cds chromosome:12X:1:16686010:16690231:-1 gene:VIT_01s0010g01100 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGATAAAAATCGTTACCGAAAACAGTTGCGACACGGCCAATTCTATTCTTTGTTTTTAT
ATTTCTAACAAGAAAAAGTATCATTTTAACATTTTAGAATTGAATTATGTTGACTGTCTC
CGTTTTAAAATAAAAGCAAAAAATAAAAATAAAAATAAAAGAAGAAAAGTAAAGTGGGCT
TTCACCTGTGAGGTAACGTTTAGAGCAAGAAAGACAGCACCTCTCGCCGCTTTCATAACC
TCTGTTTTAGATTTTCTCTTTTCTCTTCGTCTGTTCAAATTTTTGTGTTTGGATACGTGG
GTTTTGGGTGGGTCGTTCGGCGTTTGGATTTCAGAGCCTGAAACTCTCGCGTTTGTTGCG
GAACATAGATCAAGGAGAAACATGGAAGATGTCCTAACAGAGATTCCCCCACCTTCAAGG
TTTTTTAAAGAAGATCTCAACAACTTTACTCCTCCATCACCTCCTCTTCCATCTCCATTC
CTCTTATTTTCTAGTCTGGACAAGCCCCTTCGTTCCTCCCTTCTCATCATTGCCATATCT
TCTCCTTCTCTCTCTGTGTTCCACCATGTTGCCACAAAAACCCTAATTGGGACTCTCATT
CTCCCTGAGATTCCCTTATCTGGAAACTCTATTGAACCATCTGTCAGAGACAAATCCTGC
AATATATATGCCCTTAATGATGTTTATAATTCAGTTCTCCTTGTCTCTGTTCAGTACTCT
GTCAGTGCAGAGCGATCTCATGCTATTGCAAAGTTGCTGATTGGTGAGCAGATTATTCCT
GAGAGGGTTTTGATCATGGATTCAGTTCAAAGCCGGAACTTCCGTGGTAAGCTCTCGCCA
GATGAGACATTTGCCTTCAAGCTGGAGACATCATCAGAAAGAAAAGAGCACAGTGATGGT
TCCAGCAGTTCACCACTGTTGAAGGGTTTGGACTATTTCCCATCAGGAAGCATGGTAGAT
GGCTTGGCTGCTGCTCTGCTCAGTCAATGCCAGATGAGGAACATCAAAGGAACTCTATGC
GTTTCATGGCCAGAGTTTGGTGGTTCTGGGGTGTCACTGGTTAAATCTATAATAAAGGAG
GTCTTGCCTAGCTTGGAATTTAGTGTAAACAGTGATGGGGAGGATGAATACTCTAAGTTG
GACCAGATCAAGGATCATCCTTTTGACTCTGAATTGTATACCTGA

Peptide Sequence

PEP ID

VIT_01s0010g01100.t01
PEP Infomation

pep chromosome:12X:1:16686010:16690231:-1 gene:VIT_01s0010g01100 transcript:VIT_01s0010g01100.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MIKIVTENSCDTANSILCFYISNKKKYHFNILELNYVDCLRFKIKAKNKNKNKRRKVKWA
FTCEVTFRARKTAPLAAFITSVLDFLFSLRLFKFLCLDTWVLGGSFGVWISEPETLAFVA
EHRSRRNMEDVLTEIPPPSRFFKEDLNNFTPPSPPLPSPFLLFSSLDKPLRSSLLIIAIS
SPSLSVFHHVATKTLIGTLILPEIPLSGNSIEPSVRDKSCNIYALNDVYNSVLLVSVQYS
VSAERSHAIAKLLIGEQIIPERVLIMDSVQSRNFRGKLSPDETFAFKLETSSERKEHSDG
SSSSPLLKGLDYFPSGSMVDGLAAALLSQCQMRNIKGTLCVSWPEFGGSGVSLVKSIIKE
VLPSLEFSVNSDGEDEYSKLDQIKDHPFDSELYT

Transcript Sequence

Transcript ID

VIT_01s0010g01100.t01
Transcript Infomation

cdna chromosome:12X:1:16686010:16690231:-1 gene:VIT_01s0010g01100 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGATAAAAATCGTTACCGAAAACAGTTGCGACACGGCCAATTCTATTCTTTGTTTTTAT
ATTTCTAACAAGAAAAAGTATCATTTTAACATTTTAGAATTGAATTATGTTGACTGTCTC
CGTTTTAAAATAAAAGCAAAAAATAAAAATAAAAATAAAAGAAGAAAAGTAAAGTGGGCT
TTCACCTGTGAGGTAACGTTTAGAGCAAGAAAGACAGCACCTCTCGCCGCTTTCATAACC
TCTGTTTTAGATTTTCTCTTTTCTCTTCGTCTGTTCAAATTTTTGTGTTTGGATACGTGG
GTTTTGGGTGGGTCGTTCGGCGTTTGGATTTCAGAGCCTGAAACTCTCGCGTTTGTTGCG
GAACATAGATCAAGGAGAAACATGGAAGATGTCCTAACAGAGATTCCCCCACCTTCAAGG
TTTTTTAAAGAAGATCTCAACAACTTTACTCCTCCATCACCTCCTCTTCCATCTCCATTC
CTCTTATTTTCTAGTCTGGACAAGCCCCTTCGTTCCTCCCTTCTCATCATTGCCATATCT
TCTCCTTCTCTCTCTGTGTTCCACCATGTTGCCACAAAAACCCTAATTGGGACTCTCATT
CTCCCTGAGATTCCCTTATCTGGAAACTCTATTGAACCATCTGTCAGAGACAAATCCTGC
AATATATATGCCCTTAATGATGTTTATAATTCAGTTCTCCTTGTCTCTGTTCAGTACTCT
GTCAGTGCAGAGCGATCTCATGCTATTGCAAAGTTGCTGATTGGTGAGCAGATTATTCCT
GAGAGGGTTTTGATCATGGATTCAGTTCAAAGCCGGAACTTCCGTGGTAAGCTCTCGCCA
GATGAGACATTTGCCTTCAAGCTGGAGACATCATCAGAAAGAAAAGAGCACAGTGATGGT
TCCAGCAGTTCACCACTGTTGAAGGGTTTGGACTATTTCCCATCAGGAAGCATGGTAGAT
GGCTTGGCTGCTGCTCTGCTCAGTCAATGCCAGATGAGGAACATCAAAGGAACTCTATGC
GTTTCATGGCCAGAGTTTGGTGGTTCTGGGGTGTCACTGGTTAAATCTATAATAAAGGAG
GTCTTGCCTAGCTTGGAATTTAGTGTAAACAGTGATGGGGAGGATGAATACTCTAAGTTG
GACCAGATCAAGGATCATCCTTTTGACTCTGAATTGTATACCTGATGAACTGCTTTCAAG
GTTCTAACTTTATCACTTCAAAGATTTTCTTCGTTCTCCTTATTTTTTAGTTTTGCTTTT
GTTCTTTATTTTATAACTTTTCTAATGAGGTTGTGACCAAGGATGTTTCTGGGTATGTCT
ATTGGTTGTGTCAAGGATGTAGAAATTTTTAATTTAAGAGAGATTGAAAATTGC