Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_01s0010g01080.t01
CDS Infomation

cds chromosome:12X:1:16623606:16636943:-1 gene:VIT_01s0010g01080 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCTCAAGATACTTCTGGTGCCGAATCACCTCAGCCGAGGCCAGGTCTCTTAAAAGAT
CAAGTTCGATTGGTTAGGCGAAAGAACTCTGATCGCTATGAGATTGTCCCAATCCAAGAT
CGTCTGTCATTTGAGAAGGGTTTTTTCATAGTTATCCGTGCATGCCAATTGCTAGCCCAA
AATAATGATGGAATAATATTGGTAGGTTTAGCAGGTCCCTCTGGGGCTGGGAAGACTGTT
TTTACTGAAAAGATACTCAACTTTATGCCCAGCATTGCTGTCATATCAATGGACAACTAC
AATGATGCTAGCCGAATTGTTGATGGCAACTTTGATGATCCCCGTTTGACAGACTATGAT
ACATTGCTCCAGAATGTCCATGATCTGAAGGCTGGAAAGCAGGTTCAGATTCCAATTTAT
GATTTCAAGTCTAGCTCCCGCACAGGATACAGGACACTTGAAGTCCCAAGCTCCCGTATT
GTGATCATTGAGGGTATCCATGCTTTGAGTGAAAAGATGCGACCTTTATTGGACCTCCGG
GTATCTGTAACAGGTGGAATTCACTTTGATCTTGTCAAACGGGTTTTGAGGGACATACAA
CGTGCTGGGCAAGAACCAGAAGAAATCATTCAACAAATATCTGAAACGGTATATCCAATG
TACAAGGCTTTTATTGAGCCAGATCTCGGAACAGCACATATAAAAATCACCAATAAGTTC
AACCCATTCACTGGATTTCAGAGTCCCACTTATATTTTGAAGTCTGCGAGGAATGTGACA
GTGGATCAAATCAAGGCTGTCATCACTGAAGAACATGCAGAAACTATGGAGGAAGTCTAT
GATATTTATCTTCTACCCCCTGGTGAAGATCCTGAATCTTGCCAATCATATTTAAGGATG
CGGAATAAAGATGGAAAATACAGTCTCATGTTTGAGGAATGGGTTACTGATAATCCATTT
GTTATATCACCAAGAATAACTTTTGAAGTCAGTGTGCGGCTTCTTGGTGGGCTAATGGCC
TTGGGGTACACAATAGCAACTATCCTGAAAAGAAACAGCCATGCATTTTCTGATGACAGG
GTGTGTGTGAAAATTGATTGGTTGGAACAGCTAAACCGTCAATATATTCAGGTGCAAGGA
AAAGACCGTTTGGTGGTAAAATGTGTTGGGGAGCAGCTCCAGTTGGAAGGTTCATATAGT
CCTCGTACTTACATAGAACAAATTCAGCTCGAAAAGCTTGTAAATGAAGTTATGGCATTG
CCAGATGATTTGAAGACAAAGCTTAGTATAGATGAGGATATGGTTTCCAGCCCCAAAGAG
GCTCTTTCTCGATTCTCTGCAGACAGTGTTGCTATGAGAAATAAGCACTTCAAGAGTGGT
ATGTCGCACTCATATTCAACCCATCGAGACAAGAATCTGTCTAATCATACTGGATTTTCC
GTCAGCAACCGAAAGTTTGATGACAGACCCACAGAATTACCAGCAATGCTAGCAAACAAG
GGAGCCATTACTCAGCTGTCAGAACAAATTTCATCACTAAATGATAGGATGGATGAATTT
ACAAGTCAGATTGAAGAGCTGAATTCCAAGTTAACCATGAAGAAAGTTTCTGCAAGCCAA
CAAAACTTGGCTTTTCAGGCTGAAGCAAACAATGGCTCTGCTCCTACTTTCTTCATCCCT
GGCATAGGCAATGGTTCCTTGACTGGAACCATGATGCACAAATCCTCATCTTCCTCCCAG
TTGGCTAAGGAGCTTCCTTTAATGGAAGAGATACTAGGAATTGCACGGAGTCAACGGCAA
GTGATGCATCAGTTGGACAATATTAGCAGTCTTGTGCGGGAGGACATAGGAGGAGGGAGA
TCAGAGGGAGGAAGAAGAGAGAGGAAAAGCATAATGCTTGACATTGAACCCACTAGAGTT
CCTCTGATATTGGCACTGGCAGTTGGTGGCTTGGGTATATTCTTGTTTAAAGCATTTCTA
CCCAGAAACTGA

Peptide Sequence

PEP ID

VIT_01s0010g01080.t01
PEP Infomation

pep chromosome:12X:1:16623606:16636943:-1 gene:VIT_01s0010g01080 transcript:VIT_01s0010g01080.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAQDTSGAESPQPRPGLLKDQVRLVRRKNSDRYEIVPIQDRLSFEKGFFIVIRACQLLAQ
NNDGIILVGLAGPSGAGKTVFTEKILNFMPSIAVISMDNYNDASRIVDGNFDDPRLTDYD
TLLQNVHDLKAGKQVQIPIYDFKSSSRTGYRTLEVPSSRIVIIEGIHALSEKMRPLLDLR
VSVTGGIHFDLVKRVLRDIQRAGQEPEEIIQQISETVYPMYKAFIEPDLGTAHIKITNKF
NPFTGFQSPTYILKSARNVTVDQIKAVITEEHAETMEEVYDIYLLPPGEDPESCQSYLRM
RNKDGKYSLMFEEWVTDNPFVISPRITFEVSVRLLGGLMALGYTIATILKRNSHAFSDDR
VCVKIDWLEQLNRQYIQVQGKDRLVVKCVGEQLQLEGSYSPRTYIEQIQLEKLVNEVMAL
PDDLKTKLSIDEDMVSSPKEALSRFSADSVAMRNKHFKSGMSHSYSTHRDKNLSNHTGFS
VSNRKFDDRPTELPAMLANKGAITQLSEQISSLNDRMDEFTSQIEELNSKLTMKKVSASQ
QNLAFQAEANNGSAPTFFIPGIGNGSLTGTMMHKSSSSSQLAKELPLMEEILGIARSQRQ
VMHQLDNISSLVREDIGGGRSEGGRRERKSIMLDIEPTRVPLILALAVGGLGIFLFKAFL
PRN

Transcript Sequence

Transcript ID

VIT_01s0010g01080.t01
Transcript Infomation

cdna chromosome:12X:1:16623606:16636943:-1 gene:VIT_01s0010g01080 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GTGTATTTTTAATGGCTCAAGATACTTCTGGTGCCGAATCACCTCAGCCGAGGCCAGGTC
TCTTAAAAGATCAAGTTCGATTGGTTAGGCGAAAGAACTCTGATCGCTATGAGATTGTCC
CAATCCAAGATCGTCTGTCATTTGAGAAGGGTTTTTTCATAGTTATCCGTGCATGCCAAT
TGCTAGCCCAAAATAATGATGGAATAATATTGGTAGGTTTAGCAGGTCCCTCTGGGGCTG
GGAAGACTGTTTTTACTGAAAAGATACTCAACTTTATGCCCAGCATTGCTGTCATATCAA
TGGACAACTACAATGATGCTAGCCGAATTGTTGATGGCAACTTTGATGATCCCCGTTTGA
CAGACTATGATACATTGCTCCAGAATGTCCATGATCTGAAGGCTGGAAAGCAGGTTCAGA
TTCCAATTTATGATTTCAAGTCTAGCTCCCGCACAGGATACAGGACACTTGAAGTCCCAA
GCTCCCGTATTGTGATCATTGAGGGTATCCATGCTTTGAGTGAAAAGATGCGACCTTTAT
TGGACCTCCGGGTATCTGTAACAGGTGGAATTCACTTTGATCTTGTCAAACGGGTTTTGA
GGGACATACAACGTGCTGGGCAAGAACCAGAAGAAATCATTCAACAAATATCTGAAACGG
TATATCCAATGTACAAGGCTTTTATTGAGCCAGATCTCGGAACAGCACATATAAAAATCA
CCAATAAGTTCAACCCATTCACTGGATTTCAGAGTCCCACTTATATTTTGAAGTCTGCGA
GGAATGTGACAGTGGATCAAATCAAGGCTGTCATCACTGAAGAACATGCAGAAACTATGG
AGGAAGTCTATGATATTTATCTTCTACCCCCTGGTGAAGATCCTGAATCTTGCCAATCAT
ATTTAAGGATGCGGAATAAAGATGGAAAATACAGTCTCATGTTTGAGGAATGGGTTACTG
ATAATCCATTTGTTATATCACCAAGAATAACTTTTGAAGTCAGTGTGCGGCTTCTTGGTG
GGCTAATGGCCTTGGGGTACACAATAGCAACTATCCTGAAAAGAAACAGCCATGCATTTT
CTGATGACAGGGTGTGTGTGAAAATTGATTGGTTGGAACAGCTAAACCGTCAATATATTC
AGGTGCAAGGAAAAGACCGTTTGGTGGTAAAATGTGTTGGGGAGCAGCTCCAGTTGGAAG
GTTCATATAGTCCTCGTACTTACATAGAACAAATTCAGCTCGAAAAGCTTGTAAATGAAG
TTATGGCATTGCCAGATGATTTGAAGACAAAGCTTAGTATAGATGAGGATATGGTTTCCA
GCCCCAAAGAGGCTCTTTCTCGATTCTCTGCAGACAGTGTTGCTATGAGAAATAAGCACT
TCAAGAGTGGTATGTCGCACTCATATTCAACCCATCGAGACAAGAATCTGTCTAATCATA
CTGGATTTTCCGTCAGCAACCGAAAGTTTGATGACAGACCCACAGAATTACCAGCAATGC
TAGCAAACAAGGGAGCCATTACTCAGCTGTCAGAACAAATTTCATCACTAAATGATAGGA
TGGATGAATTTACAAGTCAGATTGAAGAGCTGAATTCCAAGTTAACCATGAAGAAAGTTT
CTGCAAGCCAACAAAACTTGGCTTTTCAGGCTGAAGCAAACAATGGCTCTGCTCCTACTT
TCTTCATCCCTGGCATAGGCAATGGTTCCTTGACTGGAACCATGATGCACAAATCCTCAT
CTTCCTCCCAGTTGGCTAAGGAGCTTCCTTTAATGGAAGAGATACTAGGAATTGCACGGA
GTCAACGGCAAGTGATGCATCAGTTGGACAATATTAGCAGTCTTGTGCGGGAGGACATAG
GAGGAGGGAGATCAGAGGGAGGAAGAAGAGAGAGGAAAAGCATAATGCTTGACATTGAAC
CCACTAGAGTTCCTCTGATATTGGCACTGGCAGTTGGTGGCTTGGGTATATTCTTGTTTA
AAGCATTTCTACCCAGAAACTGAATATGAAAAACGAAAGAGTGGCTGGTTTGGGATCCCA
CCCAAGTATTTTGCAATACACCACCCTTCTGCTCGGGAACACACAGTCAAGTATGCTTTA
GGGTTGATGGACACATAATAGACCCTACTTTGTTTTAGGGATGAGGCCAGTAAACCC