Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_01s0010g00020.t01
CDS Infomation

cds chromosome:12X:1:14353846:14356865:-1 gene:VIT_01s0010g00020 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTGTTCCTCCAAGTCTAAGCTGCACCAAGGTATTGATATCACCCCATCTAAGGCTCAG
ATCAATGGCCGTCCAGCCCTTCAGCCCACTTGCAACCGAATTCCTAGCCTAGAAAGGCAT
CATTCATTTAAGAAGATCTCCCCAAAATCTCCTACTTCTCCACTACCTGCATCTCCCCCG
CCACCAACTACTATTATTAATACTACTAAAACCAAGCCTTCATTAACTCCTCCAGCCTCT
CCCAACTTAAAATCACCTAGGCAACCAGCACTTAAGAGAGGAAATGATCCTAACGGGTTG
AATTCTAGTCTTGAGAAGGTGTTAACACCACGAGGAACCACCAAATCCTCTAGTTCACCG
AAGAAGACAAAAAAATGCAGTGCTGGATTAGCACCTTCTTCTGACACTAGTTCATTGAAT
TACTCTTCCTCTTTGATAGTTGAGGCTCCAGGGAGCATAGCAGCAGCAAGAAGGGAACAA
ATGGCCATTATGCAAGTGCAGCGAAAGATGCGAATTGCCCACTATGGAAGAACAAAGTCT
GCCAAGTACGAAGAGAAGATAGGTCCTGTAGATCCTTTGGTTATCACCACTCGAGAGGAA
AAGAGATGCAGTTTCATCACCCCCAATTCAGATCCTAGCTATGTTGAATACCATGATGAA
GAATGGGGTGTCCCGGTCCATGATGATAAGCGGCTGTTCGAACTGCTAGTGATGACTGGT
GCTCAAGTTGGATCAGACTGGACAACTGTCTTGAAGAAACGTCAGGAATACAGGGATGCA
TTGTCCGGATATGATGCAGAAATTGTGGGAAAATTCAGCGAAAAGAAGATAACAAGCATC
AGTGCTTATTATGGCATAGATTTGAGCCAAGTTCGAGGAGTGGTGGACAACTCTAACCGA
ATTCTTGAGATTAAGAGGGAATTCGGATCATTTCACAAGTATATCTGGGGATTTGTGAAT
CACAAGCCCATTACCACCCAGTACAAATCATGCCACAAGATCCCAGTGAAGACCTCGAAA
TCAGAGAGCATCAGCAAAGACATGGTGAGGAGGGGTTTCAGGTTGGTTGGGCCCACTGTA
ATTTATTCGTTCATGCAAGCCGCTGGCCTCACCAATGACCACTTGATCAGCTGTCCTAGA
CATCTTCAATGCATCGCGCTGTCATCACACCAACCCGCCGTAGCCCCGGCTCTATAG

Peptide Sequence

PEP ID

VIT_01s0010g00020.t01
PEP Infomation

pep chromosome:12X:1:14353846:14356865:-1 gene:VIT_01s0010g00020 transcript:VIT_01s0010g00020.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MCSSKSKLHQGIDITPSKAQINGRPALQPTCNRIPSLERHHSFKKISPKSPTSPLPASPP
PPTTIINTTKTKPSLTPPASPNLKSPRQPALKRGNDPNGLNSSLEKVLTPRGTTKSSSSP
KKTKKCSAGLAPSSDTSSLNYSSSLIVEAPGSIAAARREQMAIMQVQRKMRIAHYGRTKS
AKYEEKIGPVDPLVITTREEKRCSFITPNSDPSYVEYHDEEWGVPVHDDKRLFELLVMTG
AQVGSDWTTVLKKRQEYRDALSGYDAEIVGKFSEKKITSISAYYGIDLSQVRGVVDNSNR
ILEIKREFGSFHKYIWGFVNHKPITTQYKSCHKIPVKTSKSESISKDMVRRGFRLVGPTV
IYSFMQAAGLTNDHLISCPRHLQCIALSSHQPAVAPAL

Transcript Sequence

Transcript ID

VIT_01s0010g00020.t01
Transcript Infomation

cdna chromosome:12X:1:14353846:14356865:-1 gene:VIT_01s0010g00020 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATTCTCTCATCCTCGTTTCTTCTTACTCCCGCTAATTTGGGAAACCAAAGCCATTCATTC
ATTAGTTCATCCATTCTCTCAATACTGTACCAACCCAAAAGCATTCAATATGTGTTCCTC
CAAGTCTAAGCTGCACCAAGGTATTGATATCACCCCATCTAAGGCTCAGATCAATGGCCG
TCCAGCCCTTCAGCCCACTTGCAACCGAATTCCTAGCCTAGAAAGGCATCATTCATTTAA
GAAGATCTCCCCAAAATCTCCTACTTCTCCACTACCTGCATCTCCCCCGCCACCAACTAC
TATTATTAATACTACTAAAACCAAGCCTTCATTAACTCCTCCAGCCTCTCCCAACTTAAA
ATCACCTAGGCAACCAGCACTTAAGAGAGGAAATGATCCTAACGGGTTGAATTCTAGTCT
TGAGAAGGTGTTAACACCACGAGGAACCACCAAATCCTCTAGTTCACCGAAGAAGACAAA
AAAATGCAGTGCTGGATTAGCACCTTCTTCTGACACTAGTTCATTGAATTACTCTTCCTC
TTTGATAGTTGAGGCTCCAGGGAGCATAGCAGCAGCAAGAAGGGAACAAATGGCCATTAT
GCAAGTGCAGCGAAAGATGCGAATTGCCCACTATGGAAGAACAAAGTCTGCCAAGTACGA
AGAGAAGATAGGTCCTGTAGATCCTTTGGTTATCACCACTCGAGAGGAAAAGAGATGCAG
TTTCATCACCCCCAATTCAGATCCTAGCTATGTTGAATACCATGATGAAGAATGGGGTGT
CCCGGTCCATGATGATAAGCGGCTGTTCGAACTGCTAGTGATGACTGGTGCTCAAGTTGG
ATCAGACTGGACAACTGTCTTGAAGAAACGTCAGGAATACAGGGATGCATTGTCCGGATA
TGATGCAGAAATTGTGGGAAAATTCAGCGAAAAGAAGATAACAAGCATCAGTGCTTATTA
TGGCATAGATTTGAGCCAAGTTCGAGGAGTGGTGGACAACTCTAACCGAATTCTTGAGAT
TAAGAGGGAATTCGGATCATTTCACAAGTATATCTGGGGATTTGTGAATCACAAGCCCAT
TACCACCCAGTACAAATCATGCCACAAGATCCCAGTGAAGACCTCGAAATCAGAGAGCAT
CAGCAAAGACATGGTGAGGAGGGGTTTCAGGTTGGTTGGGCCCACTGTAATTTATTCGTT
CATGCAAGCCGCTGGCCTCACCAATGACCACTTGATCAGCTGTCCTAGACATCTTCAATG
CATCGCGCTGTCATCACACCAACCCGCCGTAGCCCCGGCTCTATAGAATCACATTCAGCT
CAGAAATTAACAGCACAGCACAAGGAGAACAAAAGGGTAGACAAATTAATAAAATTTAAG
CTTATATAATGTGTGATATCCTAATATTGTAACCGCTTATGCGCCATAGGTAGCTATCTG
ATTTTCTAACTATACATGATTTAATTAGTGGTGGTGACTGGTGTGTAATCTGATGTTATG
AGGGTCTTGTGATGAGTCCATGAGATGGATTGATCGGATAGCTATAGAGAAAAAGAAAAG
AGAAAGAAAGAAAGAAAATAAAAGGGAAAAAAAAAAAAAGGGAAGAAAAGTGCGTGGATT
GTAGGGGAGAAGGGAGACAGAGAGCATGTGCAGTGGGCGGGCAATGGCATGTGTTAGTAT
CAATGACTTTCATATGTTGCGAGTCGTGACCACCACAAACCCACGCAGCAAACCTCCATT
ATTTGCTGACCTTTTTAACAGGCTGTGAGAGTGGCACTGGGCCAGCCCTTCCTTTGGATT
GGTTAGGATTGGATCAGAAGAGTTTACTTCTACCCAAAGGGAAAATCATGATTCCATGCT
TCTGAGGTCAGGTTGGTGACACGTGCAGCAATAAAATAGGAACAAGAAGAAAAAGATGGT
TACCAGTTCAACAAAAATGCACCAAACCCAACTTCTGAACTTTCTACAATGAGTCTCTGC
ATAATTTCTCATGGATGTGTGAAGTTGTTGGAATTTTCAGTTTTTCTTTCCTTACTGTAT
TTACAACTGTCATGCAAGTTTGTACCGTTTGCTCGATATATATAATATATATGCCTCGTT
TT