Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_00s2397g00010.t01
CDS Infomation

cds chromosome:12X:Un:41879685:41881852:-1 gene:VIT_00s2397g00010 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAGTGGCAAGCAATTTGGACATTTCTTGATATGCTTGAATTGGGGTTTTACCCGAAT
GAGTATTGCTTTGCGGCCGTGATTCGGGCTTGTTCAAACGCCAATTACGCCTGGGTTGGG
GAGATAATTTATGGGTTTGTGGTGAAAACCGGGTACCTTGAGGCTGATGTCTGTGTTGGG
TGCGAATTGATTGATATGTTTGTGAAGGGTAGTGGTGATTTGGGCTCAGCTTATAAGGTG
TTTGACAAAATGCCTGAAAGAAATTTGGTTACTTGGACTTTAATGATAACTAGATTTGCG
CAATTAGGTTGTGCAAGAGATGCAATTGATTTGTTTTTAGATATGGAATTGAGTGGTTAT
GTACCGGACCGTTTTACATATAGTAGTGTCCTTTCTGCTTGTACAGAATTAGGATTGTTA
GCACTAGGAAAGCAATTGCATTCACGAGTAATACGTTTAGGATTGGCATTGGATGTTTGT
GTTGGTTGTAGCTTGGTGGACATGTATGCAAAGTGTGCAGCAGATGGGTCAGTGGATGAT
TCGAGGAAGGTATTTGAGCAGATGCCTGAGCATAATGTTATGTCTTGGACTGCAATTATC
ACAGCGTATGTGCAAAGTGGAGAGTGTGATAAGGAAGCTATTGAACTTTTCTGCAAGATG
ATATCCGGTCATATACGGCCTAATCATTTCTCATTTTCAAGTGTTCTCAAGGCATGTGGA
AACCTTTCTGATCCATATACAGGTGAGCAGGTGTACAGCTATGCAGTGAAACTGGGCATA
GCATCAGTGAATTGTGTGGGGAATTCTCTTATTAGCATGTATGCTAGGAGTGGAAGAATG
GAAGATGCCCGAAAAGCTTTTGATATTCTCTTTGAGAAGAATTTGGTTTCTTACAATGCA
ATTGTTGATGGGTATGCCAAGAACTTGAAGTCTGAAGAAGCTTTTCTACTCTTTAATGAG
ATCGCAGATACTGGTATTGGTATCAGTGCTTTTACATTTGCTAGCTTGTTGAGTGGGGCT
GCAAGTATAGGTGCAATGGGCAAAGGTGAGCAGATTCATGGTCGGTTATTGAAGGGAGGC
TACAAGTCAAACCAATGCATTTGTAATGCTTTGATCTCTATGTATTCTAGGTGTGGTAAC
ATTGAAGCTGCTTTTCAAGTTTTTAATGAGATGGAAGATCGGAATGTGATATCTTGGACT
TCAATGATCACAGGTTTTGCAAAACATGGATTTGCAACCAGAGCTTTGGAAATGTTCCAT
AAAATGCTTGAGACAGGGACAAAGCCGAATGAGATCACCTATGTTGCCGTATTATCAGCT
TGTAGCCATGTTGGTATGATCTCTGAGGGACAGAAACACTTCAATTCAATGTACAAAGAA
CATGGAATTGTCCCAAGAATGGAGCATTATGCATGTATGGTTGATTTACTAGGCCGGTCT
GGACTTCTTGTAGAAGCCATGGAGTTCATTAACTCAATGCCCCTCATGGCTGATGCTCTG
GTTTGGCGAACACTGCTTGGAGCCTGCCGTGTTCATGGTAATACAGAGCTTGGAAGACAT
GCTGCAGAGATGATTCTTGAGCAGGAACCAGATGACCCAGCAGCATATATCTTACTGTCA
AACTTGCATGCTTCAGCAGGTCAGTGGAAAGACGTAGTGAAGATCAGAAAAAGTATGAAA
GAGCGTAATTTGATCAAAGAAGCTGGCTGTAGTTGGATTGAGGTAGAAAATAGGGTGCAC
AGGTTCCATGTAGGGGAGACTTCCCACCCTCAAGCCTGGCAGATTTATCAAGAACTGGAC
CAACTGGCTTCCAAAATAAAGGAGATGGGTTACATCCCTGACACAGACTTTGTTCTTCAC
GACATAGAAGAAGAACAAAAGGAGCAATTCTTGTTCCAACACAGTGAGAAAATAGCAGTG
GCATTTGGGCTTATAAGCACAAGCCAGTCGAAACCCATCAGGATATTTAAGAATCTTCGC
GTCTGTGGCGATTGCCATACTGCAATAAAGTACATTTCAATGGCAACAGGGAGAGAAATA
GTAGTAAGGGACTCTAACCGGTTTCATCATATAAAGAATGGGGTGTGCTCTTGTAACGAT
TACTGGTGA

Peptide Sequence

PEP ID

VIT_00s2397g00010.t01
PEP Infomation

pep chromosome:12X:Un:41879685:41881852:-1 gene:VIT_00s2397g00010 transcript:VIT_00s2397g00010.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MEWQAIWTFLDMLELGFYPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVG
CELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGY
VPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDD
SRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACG
NLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNA
IVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGG
YKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFH
KMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRS
GLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLS
NLHASAGQWKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELD
QLASKIKEMGYIPDTDFVLHDIEEEQKEQFLFQHSEKIAVAFGLISTSQSKPIRIFKNLR
VCGDCHTAIKYISMATGREIVVRDSNRFHHIKNGVCSCNDYW

Transcript Sequence

Transcript ID

VIT_00s2397g00010.t01
Transcript Infomation

cdna chromosome:12X:Un:41879685:41881852:-1 gene:VIT_00s2397g00010 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GAGAGACTTGGTTTCATGGAGTGCGATGGTCTCATGTTTTGCGAATAACAGTATGGAGTG
GCAAGCAATTTGGACATTTCTTGATATGCTTGAATTGGGGTTTTACCCGAATGAGTATTG
CTTTGCGGCCGTGATTCGGGCTTGTTCAAACGCCAATTACGCCTGGGTTGGGGAGATAAT
TTATGGGTTTGTGGTGAAAACCGGGTACCTTGAGGCTGATGTCTGTGTTGGGTGCGAATT
GATTGATATGTTTGTGAAGGGTAGTGGTGATTTGGGCTCAGCTTATAAGGTGTTTGACAA
AATGCCTGAAAGAAATTTGGTTACTTGGACTTTAATGATAACTAGATTTGCGCAATTAGG
TTGTGCAAGAGATGCAATTGATTTGTTTTTAGATATGGAATTGAGTGGTTATGTACCGGA
CCGTTTTACATATAGTAGTGTCCTTTCTGCTTGTACAGAATTAGGATTGTTAGCACTAGG
AAAGCAATTGCATTCACGAGTAATACGTTTAGGATTGGCATTGGATGTTTGTGTTGGTTG
TAGCTTGGTGGACATGTATGCAAAGTGTGCAGCAGATGGGTCAGTGGATGATTCGAGGAA
GGTATTTGAGCAGATGCCTGAGCATAATGTTATGTCTTGGACTGCAATTATCACAGCGTA
TGTGCAAAGTGGAGAGTGTGATAAGGAAGCTATTGAACTTTTCTGCAAGATGATATCCGG
TCATATACGGCCTAATCATTTCTCATTTTCAAGTGTTCTCAAGGCATGTGGAAACCTTTC
TGATCCATATACAGGTGAGCAGGTGTACAGCTATGCAGTGAAACTGGGCATAGCATCAGT
GAATTGTGTGGGGAATTCTCTTATTAGCATGTATGCTAGGAGTGGAAGAATGGAAGATGC
CCGAAAAGCTTTTGATATTCTCTTTGAGAAGAATTTGGTTTCTTACAATGCAATTGTTGA
TGGGTATGCCAAGAACTTGAAGTCTGAAGAAGCTTTTCTACTCTTTAATGAGATCGCAGA
TACTGGTATTGGTATCAGTGCTTTTACATTTGCTAGCTTGTTGAGTGGGGCTGCAAGTAT
AGGTGCAATGGGCAAAGGTGAGCAGATTCATGGTCGGTTATTGAAGGGAGGCTACAAGTC
AAACCAATGCATTTGTAATGCTTTGATCTCTATGTATTCTAGGTGTGGTAACATTGAAGC
TGCTTTTCAAGTTTTTAATGAGATGGAAGATCGGAATGTGATATCTTGGACTTCAATGAT
CACAGGTTTTGCAAAACATGGATTTGCAACCAGAGCTTTGGAAATGTTCCATAAAATGCT
TGAGACAGGGACAAAGCCGAATGAGATCACCTATGTTGCCGTATTATCAGCTTGTAGCCA
TGTTGGTATGATCTCTGAGGGACAGAAACACTTCAATTCAATGTACAAAGAACATGGAAT
TGTCCCAAGAATGGAGCATTATGCATGTATGGTTGATTTACTAGGCCGGTCTGGACTTCT
TGTAGAAGCCATGGAGTTCATTAACTCAATGCCCCTCATGGCTGATGCTCTGGTTTGGCG
AACACTGCTTGGAGCCTGCCGTGTTCATGGTAATACAGAGCTTGGAAGACATGCTGCAGA
GATGATTCTTGAGCAGGAACCAGATGACCCAGCAGCATATATCTTACTGTCAAACTTGCA
TGCTTCAGCAGGTCAGTGGAAAGACGTAGTGAAGATCAGAAAAAGTATGAAAGAGCGTAA
TTTGATCAAAGAAGCTGGCTGTAGTTGGATTGAGGTAGAAAATAGGGTGCACAGGTTCCA
TGTAGGGGAGACTTCCCACCCTCAAGCCTGGCAGATTTATCAAGAACTGGACCAACTGGC
TTCCAAAATAAAGGAGATGGGTTACATCCCTGACACAGACTTTGTTCTTCACGACATAGA
AGAAGAACAAAAGGAGCAATTCTTGTTCCAACACAGTGAGAAAATAGCAGTGGCATTTGG
GCTTATAAGCACAAGCCAGTCGAAACCCATCAGGATATTTAAGAATCTTCGCGTCTGTGG
CGATTGCCATACTGCAATAAAGTACATTTCAATGGCAACAGGGAGAGAAATAGTAGTAAG
GGACTCTAACCGGTTTCATCATATAAAGAATGGGGTGTGCTCTTGTAACGATTACTGGTG
ATAACCTA