Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_00s2240g00010.t01
CDS Infomation

cds chromosome:12X:Un:41417853:41419217:1 gene:VIT_00s2240g00010 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTCGCAGCACATGGACAACATCCCCTCCACGCCCGGAAAATTCAAGTCCGACAAGTAT
CACTACATTCACCGATTCCGATCCCACTCGTCTCTCGCCAAGCTCATTCTCTGGTCATTA
TTCTTCTTCAGCGTCATTTGCTTTTTCTTTCTGTTATCGCCTACGTCGCCGACGTCCCCT
CCCGCTGACCGGTCTCGCCGGGTTCTGGCGAACTATACTTGGGGAGGTCCCGAATGGGAA
AAGAAGGTGCGGCAATCGGCGCGTGTACGCTCTGATCACGGCCATACCGTGCTGGTGACC
GGTGGCGCCGGCTTCGTCGGTAGCCACGTCTCTGCAGCGCTGAAGCGGCGGGGAGATGGC
GTTATCGGCCTCGACAATTTTAACAACTACTACGACCCGGAACTGAAGCGCCACCGCCGC
GACCTGCTTGAGCGCGCCGGCGTGTTTGTGGTGGAAGGCGATATCAATGACTCGGAGCTT
CTTAGGAAGCTCTTCGATGTGGTCGCGTTCACACACGTAATGCACCTTGCTGCTCAGGCC
GGTGTTCGCTACGCAATGCAGAATCCTAAGTCATATGTCAACAGTAACATTGCTGGGCTT
GTGAATCTTCTTGAAGTTTGTAAATCTGCGGACCCGCAGCCAGCTATCGTCTGGGCATCT
TCGAGCTCTGTTTATGGGCTTAATTCTAAGGTGCCCTTCTCGGAAAAAGATCGAACGGAC
CGTCCGGCGAGCCTATACGCAGCGACAAAGAAAGCAGGTGAAGCCATTGCTCATACATAT
AATCATATATACGGTCTTTCAATTACTGGCTTGCGATTTTTCACCGTGTACGGACCGTGG
GGCAGGCCAGATATGGCATATTTCTTCTTTACTCGAGATATTCTCACAGGGAAGCCAATT
ACGATCTTTGAAGGGCCAGATCATGGATCTGTTGCTAGAGATTTTACATACATTGATGAT
ATAGTGAAGGGGTGTTTGGCATCATTGGATACCGCGAAGAAAAGTACAGGTACTGGTGGT
AAGAAGAAGGGGGCGGCTCAATTTCGGATTTTCAATTTGGGGAACACGTCGCCGGTGGAT
GTGAGCAAGCTGGTGAGCATACTGGAGAAGCTTTTGAAGGTGAAAGCAAAAAGGAGGGTG
TTGCCCATGCCCAGGAATGGAGATGT

Peptide Sequence

PEP ID

VIT_00s2240g00010.t01
PEP Infomation

pep chromosome:12X:Un:41417853:41419217:1 gene:VIT_00s2240g00010 transcript:VIT_00s2240g00010.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MSQHMDNIPSTPGKFKSDKYHYIHRFRSHSSLAKLILWSLFFFSVICFFFLLSPTSPTSP
PADRSRRVLANYTWGGPEWEKKVRQSARVRSDHGHTVLVTGGAGFVGSHVSAALKRRGDG
VIGLDNFNNYYDPELKRHRRDLLERAGVFVVEGDINDSELLRKLFDVVAFTHVMHLAAQA
GVRYAMQNPKSYVNSNIAGLVNLLEVCKSADPQPAIVWASSSSVYGLNSKVPFSEKDRTD
RPASLYAATKKAGEAIAHTYNHIYGLSITGLRFFTVYGPWGRPDMAYFFFTRDILTGKPI
TIFEGPDHGSVARDFTYIDDIVKGCLASLDTAKKSTGTGGKKKGAAQFRIFNLGNTSPVD
VSKLVSILEKLLKVKAKRRVLPMPRNGD

Transcript Sequence

Transcript ID

VIT_00s2240g00010.t01
Transcript Infomation

cdna chromosome:12X:Un:41417853:41419217:1 gene:VIT_00s2240g00010 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AGAAGGTTGCAGCAAAAAGGTCTCACTGTTTCTTCACAACACGCATCAAGCCAATAGTCG
TCTGTGAAGAACAAGAGCGCAACCCCATTATGACCCACAAAACCTATACCCTTTTGTTTC
TATTTCTGAGTTGAAGAATCGAGTCAGGAGAGGAGGGAATAGACTAGGGTTTGATCAGGT
TCCGATCAGTTTTCTGCCAATGTCGCAGCACATGGACAACATCCCCTCCACGCCCGGAAA
ATTCAAGTCCGACAAGTATCACTACATTCACCGATTCCGATCCCACTCGTCTCTCGCCAA
GCTCATTCTCTGGTCATTATTCTTCTTCAGCGTCATTTGCTTTTTCTTTCTGTTATCGCC
TACGTCGCCGACGTCCCCTCCCGCTGACCGGTCTCGCCGGGTTCTGGCGAACTATACTTG
GGGAGGTCCCGAATGGGAAAAGAAGGTGCGGCAATCGGCGCGTGTACGCTCTGATCACGG
CCATACCGTGCTGGTGACCGGTGGCGCCGGCTTCGTCGGTAGCCACGTCTCTGCAGCGCT
GAAGCGGCGGGGAGATGGCGTTATCGGCCTCGACAATTTTAACAACTACTACGACCCGGA
ACTGAAGCGCCACCGCCGCGACCTGCTTGAGCGCGCCGGCGTGTTTGTGGTGGAAGGCGA
TATCAATGACTCGGAGCTTCTTAGGAAGCTCTTCGATGTGGTCGCGTTCACACACGTAAT
GCACCTTGCTGCTCAGGCCGGTGTTCGCTACGCAATGCAGAATCCTAAGTCATATGTCAA
CAGTAACATTGCTGGGCTTGTGAATCTTCTTGAAGTTTGTAAATCTGCGGACCCGCAGCC
AGCTATCGTCTGGGCATCTTCGAGCTCTGTTTATGGGCTTAATTCTAAGGTGCCCTTCTC
GGAAAAAGATCGAACGGACCGTCCGGCGAGCCTATACGCAGCGACAAAGAAAGCAGGTGA
AGCCATTGCTCATACATATAATCATATATACGGTCTTTCAATTACTGGCTTGCGATTTTT
CACCGTGTACGGACCGTGGGGCAGGCCAGATATGGCATATTTCTTCTTTACTCGAGATAT
TCTCACAGGGAAGCCAATTACGATCTTTGAAGGGCCAGATCATGGATCTGTTGCTAGAGA
TTTTACATACATTGATGATATAGTGAAGGGGTGTTTGGCATCATTGGATACCGCGAAGAA
AAGTACAGGTACTGGTGGTAAGAAGAAGGGGGCGGCTCAATTTCGGATTTTCAATTTGGG
GAACACGTCGCCGGTGGATGTGAGCAAGCTGGTGAGCATACTGGAGAAGCTTTTGAAGGT
GAAAGCAAAAAGGAGGGTGTTGCCCATGCCCAGGAATGGAGATGT