Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_00s2015g00020.t01
CDS Infomation

cds chromosome:12X:Un:40897329:40898544:-1 gene:VIT_00s2015g00020 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAGGGACGAAAATGGGAGGAGTTAAACATGGATATTTTGGTGAATGTGTTTGGAAGA
GTGGGAATGGAGTCGTTGTTGTTGGATGTTCCCTTTGTATGTAAGTCTTGGTATAAAGCG
AGCCGCGAACCTCAGTGCTGGGAGCATCTTATTTTTCCTGAATACATCAAATCTGACGAT
ATATGGGAAGAAGACAGCCCCGACAGGGGCTTTGCAGAGAGGTTAGTGACTACATATCAA
GAAAACTTGTCTGTCACTGCATTCATGAAGTTCATAGTTAACCGTAGCGGTGGATGTGCC
ACAATCATCAAACTCCCCAAAGACTGCACCGAGGAGGCACTGGAGTGTCCCAGATTAAAG
GCTTTGGATGTGGTTTTTAATAATTTTTCTATGGAAGATATTATTCCAAAACTAAGCAAG
TGGAAAAGCTTGGAACTGATGAGACTAGGGAAATTTCATGTAGGGCTATTTCACATGAAA
TCTGTCCTACCACAGATCGGTCTTCACTGCAACAACTTCATTTGGCTATCAGCTCCACAT
GCCTCCATTGAGAAAGATGAAGCATCGGCCATTGTGGCCTCACTGCCAAGACTCAAGTAC
TTGGATCTACATTACTCATTTTTTGAGAAGGAAGCTCTAGTGATGATATTGCAGGGCTGC
AAAAAGCTTGTTCATTTAGACGTCAGGAAGTGCTTTGGTTTTTGTGATGATGATGCCGAG
ATATTGGAGCTTGCTTCACATATTCCTGTATTCATGTGTGAAGGGTCGGGCATAATACCT
GAGATAGGAACCAGTTATCTGCGTGACCGCAGGCTTGACCATGAGCTATACTGCGATCAA
ATTAATCACGATGACTGTGTTTATGATTTATTCGATTATGATGATTTGTTTGACGGTTTG
TGA

Peptide Sequence

PEP ID

VIT_00s2015g00020.t01
PEP Infomation

pep chromosome:12X:Un:40897329:40898544:-1 gene:VIT_00s2015g00020 transcript:VIT_00s2015g00020.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MEGRKWEELNMDILVNVFGRVGMESLLLDVPFVCKSWYKASREPQCWEHLIFPEYIKSDD
IWEEDSPDRGFAERLVTTYQENLSVTAFMKFIVNRSGGCATIIKLPKDCTEEALECPRLK
ALDVVFNNFSMEDIIPKLSKWKSLELMRLGKFHVGLFHMKSVLPQIGLHCNNFIWLSAPH
ASIEKDEASAIVASLPRLKYLDLHYSFFEKEALVMILQGCKKLVHLDVRKCFGFCDDDAE
ILELASHIPVFMCEGSGIIPEIGTSYLRDRRLDHELYCDQINHDDCVYDLFDYDDLFDGL

Transcript Sequence

Transcript ID

VIT_00s2015g00020.t01
Transcript Infomation

cdna chromosome:12X:Un:40897329:40898544:-1 gene:VIT_00s2015g00020 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AGATGGAGGGACGAAAATGGGAGGAGTTAAACATGGATATTTTGGTGAATGTGTTTGGAA
GAGTGGGAATGGAGTCGTTGTTGTTGGATGTTCCCTTTGTATGTAAGTCTTGGTATAAAG
CGAGCCGCGAACCTCAGTGCTGGGAGCATCTTATTTTTCCTGAATACATCAAATCTGACG
ATATATGGGAAGAAGACAGCCCCGACAGGGGCTTTGCAGAGAGGTTAGTGACTACATATC
AAGAAAACTTGTCTGTCACTGCATTCATGAAGTTCATAGTTAACCGTAGCGGTGGATGTG
CCACAATCATCAAACTCCCCAAAGACTGCACCGAGGAGGCACTGGAGTGTCCCAGATTAA
AGGCTTTGGATGTGGTTTTTAATAATTTTTCTATGGAAGATATTATTCCAAAACTAAGCA
AGTGGAAAAGCTTGGAACTGATGAGACTAGGGAAATTTCATGTAGGGCTATTTCACATGA
AATCTGTCCTACCACAGATCGGTCTTCACTGCAACAACTTCATTTGGCTATCAGCTCCAC
ATGCCTCCATTGAGAAAGATGAAGCATCGGCCATTGTGGCCTCACTGCCAAGACTCAAGT
ACTTGGATCTACATTACTCATTTTTTGAGAAGGAAGCTCTAGTGATGATATTGCAGGGCT
GCAAAAAGCTTGTTCATTTAGACGTCAGGAAGTGCTTTGGTTTTTGTGATGATGATGCCG
AGATATTGGAGCTTGCTTCACATATTCCTGTATTCATGTGTGAAGGGTCGGGCATAATAC
CTGAGATAGGAACCAGTTATCTGCGTGACCGCAGGCTTGACCATGAGCTATACTGCGATC
AAATTAATCACGATGACTGTGTTTATGATTTATTCGATTATGATGATTTGTTTGACGGTT
TGTGATTTCAGTTGAGGTTCAGGTGGGCTTGTTAATAAGCTAAAGCGCTATGAAAAACTC
GCTTGCGTGCCTCTTTATGTAATGTAAGACAAATTATTAGTGACTCTGAAGAGTTAATGC
TGCTCTACCTAGACTGCAAAATATGCTAATATTG