Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_00s1543g00010.t01
CDS Infomation

cds chromosome:12X:Un:39537434:39538293:-1 gene:VIT_00s1543g00010 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAATGCAAGGTTGGGTGCGGGTGTAGAAGAAGCTATGGATCCAATTCAGTTTTTTTCC
CGTGCTAGAGTTGAATGGATATACATGGGTCTGGCAGAAGATTACACATGGTCCTTTGGA
CTGACTCTTGGGCCCCTTTCCACGGTAGAAGATAAGGCTTGGACCAACCAAACACACAGG
AGCCACCCACCCACCCACCCACACTCAGAGGCTCAGCAGCAGAACCACTTGAGACTTGAG
AGTGGAGCACAAGAACACATCAAAGAGATGAAGGCATCTGCCCTGAAATTCCAATCCCAC
ATCCCCAGCCCCACCAACCTCCCCACCCCAACTGCAAATCCTCTCTTTCTCATACCTTTC
AAGCCCAGACCATCCCTAAACCACCCTGCAAAGCCATCATCTGTATCTCTTCCTTCAAGA
GGTCATATCAACAAGCCTCTGGTCTCATCAGGCCTCACACCCAGATCCCAGAAACCGTCA
AAAGAGGAGTTTTGTCAAGTTTCTGCAAATGGGTGCTCAAGATTTGTGATGATTGGAGCA
GTTTCAGTGGGGGTTGTGCTGTTGCTGATGGGAGTGGACGAGCACAAGGCACTGGCTTTG
GGGCCTGAGGGGCCATTGATGGAGGAGTTTTGGGACAATGTGAGAAGATATGCTCTGTAT
TTTCTGACAGTGAGTACTGGTGCTGTTTACACTGTCTTCGTGCCTATATTGGAGTTGCTG
AAGAACCCCATTTCAGCAATTCTTGTTCTAGTGATTTTTGGGGGCAGTCTGTATATTGTA
TCCCAAGTGATTTCAGCCATGGTTGGTGTCACTGAATTTTCTTATGATTACAGTTATTAG

Peptide Sequence

PEP ID

VIT_00s1543g00010.t01
PEP Infomation

pep chromosome:12X:Un:39537434:39538293:-1 gene:VIT_00s1543g00010 transcript:VIT_00s1543g00010.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MNARLGAGVEEAMDPIQFFSRARVEWIYMGLAEDYTWSFGLTLGPLSTVEDKAWTNQTHR
SHPPTHPHSEAQQQNHLRLESGAQEHIKEMKASALKFQSHIPSPTNLPTPTANPLFLIPF
KPRPSLNHPAKPSSVSLPSRGHINKPLVSSGLTPRSQKPSKEEFCQVSANGCSRFVMIGA
VSVGVVLLLMGVDEHKALALGPEGPLMEEFWDNVRRYALYFLTVSTGAVYTVFVPILELL
KNPISAILVLVIFGGSLYIVSQVISAMVGVTEFSYDYSY

Transcript Sequence

Transcript ID

VIT_00s1543g00010.t01
Transcript Infomation

cdna chromosome:12X:Un:39537434:39538293:-1 gene:VIT_00s1543g00010 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAATGCAAGGTTGGGTGCGGGTGTAGAAGAAGCTATGGATCCAATTCAGTTTTTTTCC
CGTGCTAGAGTTGAATGGATATACATGGGTCTGGCAGAAGATTACACATGGTCCTTTGGA
CTGACTCTTGGGCCCCTTTCCACGGTAGAAGATAAGGCTTGGACCAACCAAACACACAGG
AGCCACCCACCCACCCACCCACACTCAGAGGCTCAGCAGCAGAACCACTTGAGACTTGAG
AGTGGAGCACAAGAACACATCAAAGAGATGAAGGCATCTGCCCTGAAATTCCAATCCCAC
ATCCCCAGCCCCACCAACCTCCCCACCCCAACTGCAAATCCTCTCTTTCTCATACCTTTC
AAGCCCAGACCATCCCTAAACCACCCTGCAAAGCCATCATCTGTATCTCTTCCTTCAAGA
GGTCATATCAACAAGCCTCTGGTCTCATCAGGCCTCACACCCAGATCCCAGAAACCGTCA
AAAGAGGAGTTTTGTCAAGTTTCTGCAAATGGGTGCTCAAGATTTGTGATGATTGGAGCA
GTTTCAGTGGGGGTTGTGCTGTTGCTGATGGGAGTGGACGAGCACAAGGCACTGGCTTTG
GGGCCTGAGGGGCCATTGATGGAGGAGTTTTGGGACAATGTGAGAAGATATGCTCTGTAT
TTTCTGACAGTGAGTACTGGTGCTGTTTACACTGTCTTCGTGCCTATATTGGAGTTGCTG
AAGAACCCCATTTCAGCAATTCTTGTTCTAGTGATTTTTGGGGGCAGTCTGTATATTGTA
TCCCAAGTGATTTCAGCCATGGTTGGTGTCACTGAATTTTCTTATGATTACAGTTATTAG
ATATGAAGAGGCTCCTTTGT