Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_00s1542g00020.t01
CDS Infomation

cds chromosome:12X:Un:39530706:39532050:1 gene:VIT_00s1542g00020 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAGGAATTGGGTTGGGTTTCTATGGAAAATGAGTCTAAGAAGAAAACTACACCTCTC
CTGATTGGTTTAGTTGTAGGAGGTTTGGCTCTCGTCTGCATTGTGATAATTGTGCTCTCG
TTGCGATTAAAATGCAGGAAGGAAAAGCCTGCTGAAGCTTCACACTGGTTGCCAGTTACT
GTTGATGGGGGATTGAGTTCCCACAGCAGGGTGTATGAGGCAACCATCCATGGCTCCCCT
GTTCCTCATTTAAATCTGGGATTAAAAATACCATTTGCAGAAATTCAGTCTGCAACAAAC
AACTTCAGCCGCAAGTTGCTGGTTGGTAAGGGTGGATTTGGCAAAGTGTACCCAGGAACT
CTCAGGAATGGCATGAAAGTGGCAGTGAAGAGAAGTCAGCCAGGACATGGCCAAGGCCTG
CCTGAATTCCAGACTGAGATATTGGAAGGGACTCTAAGAAATCATCTGTATGGTTCAGAT
TTGCCGTGTTTATCTTGGAAGCAAAGGCTGGAAATTTGCATTGGTGCAGCAAGGGGACTT
CACTACCTCCACACAGGTTCAGAAGGCGGAATCATTCACCGTGATAGTAAGTCCACAAAC
ATCTTGCTTGATGACAACTTTGTTTCTAAAGTTGCTGATTTTGGATTATCAAGATCAGGT
CTTCCTCATCAAACCCATGTCAGCACAGCTGTCAAAGGCACCTTTGGATATCTCGATCCG
GAGTACTTCAGGACCCAACAGTTGACAGACAAATCCGATGTTTACTCTTTTGGTGTGGTT
CTTCTGGAAGTGCTATGTGCCAGACCAGCTATCAATCCCTCACTTCCAAGGGAGCAAATG
AACCTAGCTGAATGGGTGATGGTTTGGCAGAAGAAAGGATTACTTGAACAGGTTATTGAT
CCTTTGCTCGTGGGTAAAGTCAATCTCAACTCACTAAGAAAATTTGGTGAAACAGCAGAA
AAATGTTTGAAGGAAGATGGCACGGATAGGCCTACTATGGGTGATGTGATGTGGGACTTG
GAGTATGCTTTTCAACTTCAACAAACTGCAATGCAGAGGGAGCCATTAGAGGACAGCACA
AACGATGCTGCTTCCACATTTCCATTGGCTACCATTCAGCATTATCCTTCATATAGCTTT
TCAATTTCAGACATCCATGGGCCTAAAAGAAGGGTCGGCAGTTCAGAGACAACAGAAAGC
GAAGTTTTCTCCCAGTTGAGGATTGCCGATGGCAGATAA

Peptide Sequence

PEP ID

VIT_00s1542g00020.t01
PEP Infomation

pep chromosome:12X:Un:39530706:39532050:1 gene:VIT_00s1542g00020 transcript:VIT_00s1542g00020.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MEELGWVSMENESKKKTTPLLIGLVVGGLALVCIVIIVLSLRLKCRKEKPAEASHWLPVT
VDGGLSSHSRVYEATIHGSPVPHLNLGLKIPFAEIQSATNNFSRKLLVGKGGFGKVYPGT
LRNGMKVAVKRSQPGHGQGLPEFQTEILEGTLRNHLYGSDLPCLSWKQRLEICIGAARGL
HYLHTGSEGGIIHRDSKSTNILLDDNFVSKVADFGLSRSGLPHQTHVSTAVKGTFGYLDP
EYFRTQQLTDKSDVYSFGVVLLEVLCARPAINPSLPREQMNLAEWVMVWQKKGLLEQVID
PLLVGKVNLNSLRKFGETAEKCLKEDGTDRPTMGDVMWDLEYAFQLQQTAMQREPLEDST
NDAASTFPLATIQHYPSYSFSISDIHGPKRRVGSSETTESEVFSQLRIADGR

Transcript Sequence

Transcript ID

VIT_00s1542g00020.t01
Transcript Infomation

cdna chromosome:12X:Un:39530706:39532050:1 gene:VIT_00s1542g00020 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AGATTATGGAAATCATGGAGGAATTGGGTTGGGTTTCTATGGAAAATGAGTCTAAGAAGA
AAACTACACCTCTCCTGATTGGTTTAGTTGTAGGAGGTTTGGCTCTCGTCTGCATTGTGA
TAATTGTGCTCTCGTTGCGATTAAAATGCAGGAAGGAAAAGCCTGCTGAAGCTTCACACT
GGTTGCCAGTTACTGTTGATGGGGGATTGAGTTCCCACAGCAGGGTGTATGAGGCAACCA
TCCATGGCTCCCCTGTTCCTCATTTAAATCTGGGATTAAAAATACCATTTGCAGAAATTC
AGTCTGCAACAAACAACTTCAGCCGCAAGTTGCTGGTTGGTAAGGGTGGATTTGGCAAAG
TGTACCCAGGAACTCTCAGGAATGGCATGAAAGTGGCAGTGAAGAGAAGTCAGCCAGGAC
ATGGCCAAGGCCTGCCTGAATTCCAGACTGAGATATTGGAAGGGACTCTAAGAAATCATC
TGTATGGTTCAGATTTGCCGTGTTTATCTTGGAAGCAAAGGCTGGAAATTTGCATTGGTG
CAGCAAGGGGACTTCACTACCTCCACACAGGTTCAGAAGGCGGAATCATTCACCGTGATA
GTAAGTCCACAAACATCTTGCTTGATGACAACTTTGTTTCTAAAGTTGCTGATTTTGGAT
TATCAAGATCAGGTCTTCCTCATCAAACCCATGTCAGCACAGCTGTCAAAGGCACCTTTG
GATATCTCGATCCGGAGTACTTCAGGACCCAACAGTTGACAGACAAATCCGATGTTTACT
CTTTTGGTGTGGTTCTTCTGGAAGTGCTATGTGCCAGACCAGCTATCAATCCCTCACTTC
CAAGGGAGCAAATGAACCTAGCTGAATGGGTGATGGTTTGGCAGAAGAAAGGATTACTTG
AACAGGTTATTGATCCTTTGCTCGTGGGTAAAGTCAATCTCAACTCACTAAGAAAATTTG
GTGAAACAGCAGAAAAATGTTTGAAGGAAGATGGCACGGATAGGCCTACTATGGGTGATG
TGATGTGGGACTTGGAGTATGCTTTTCAACTTCAACAAACTGCAATGCAGAGGGAGCCAT
TAGAGGACAGCACAAACGATGCTGCTTCCACATTTCCATTGGCTACCATTCAGCATTATC
CTTCATATAGCTTTTCAATTTCAGACATCCATGGGCCTAAAAGAAGGGTCGGCAGTTCAG
AGACAACAGAAAGCGAAGTTTTCTCCCAGTTGAGGATTGCCGATGGCAGATAA