Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_00s1389g00010.t01
CDS Infomation

cds chromosome:12X:Un:38955528:38958094:1 gene:VIT_00s1389g00010 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCAAAATCTGCAGAGCAAGAGCACCCCACCAAGGCCTTTGGATGGGCAGCAACTGAC
ACATCTGGAGTCCTCTCTCCCTTCAAATTCTCCAGAAGGGAAACAGGAGAAAAAGACGTA
AGGTTCAAGGTGTTGTATTGTGGAATATGTCACTCCGATCTACACATGGCCAAGAATGAC
TGGGGCATGTCCACCTACCCTATAGTTCCCGGACATGAAATTGTGGGCATAGTGACAGAG
GTGGGAAGCAAGGTCGGAAAGTTCAAAGTAGGAGACAGAGTTGGAGTGGGGTGCGTGGTT
GGAGCTTGTCACTCTTGTGATATCTGTGACAATGATCTAGAGAATTACTGCCCCAAAATG
ATATTCACCTACAGTGCCCCTTACCATGATGGAACCACCACATATGGAGGCTACTCAGAT
GTCATGGTTGCTGAGGAGCGCTATGTGGTTCGTATCCCAGACAACCTTCCTCTTGATGCC
GGTGCTCCTCTCCTATGTGCCGGGATCACAGTGTACAGCCCCTTGCAACATTTTGGACTC
ACCAAACCTGGAATGCACATCGGTGTGGTTGGCCTAGGTGGACTGGGACATGTAGCTGTA
AAGTTTGCCAAGGGTTTTGGGGTTAAGGTGACTGTGATCAGTACTTCCCCTAGCAAAAAG
AAGGAAGCCATAGAACACCTTGGTGCCGACTACTTTCTAGTCAGCCGCGAACCAGATCAG
ATGCAGGCTGCCATGGGCACAATGGATGGCATCATTGATACAGTCTCTGCTGTTCACCCT
CTTCTTCCATTGATCGGTTTGTTGAAATTTCAAGGGAAGCTCGTTATGGTTGGTGGACCA
AATAGGCCGCTTGAGCTACCAGTCTTTCCTTTGCTTATGGGGAGGAAGGTAGTAGCTGGA
AGCTGTACAGGAGGGATGAAGGAGACACAGGAAATGATTGATTTTGCGGGGAAACACAAC
ATAACTGCAGATGTTGAGGTTATTCCAATGGACTATGTAAACACTGCCATGGAGCGACTG
GAGAAAGCCGATGTTAAGTACCGCTTCGTAATTGACATTGGTAACACCTTGAAATCAGCC
TAA

Peptide Sequence

PEP ID

VIT_00s1389g00010.t01
PEP Infomation

pep chromosome:12X:Un:38955528:38958094:1 gene:VIT_00s1389g00010 transcript:VIT_00s1389g00010.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAKSAEQEHPTKAFGWAATDTSGVLSPFKFSRRETGEKDVRFKVLYCGICHSDLHMAKND
WGMSTYPIVPGHEIVGIVTEVGSKVGKFKVGDRVGVGCVVGACHSCDICDNDLENYCPKM
IFTYSAPYHDGTTTYGGYSDVMVAEERYVVRIPDNLPLDAGAPLLCAGITVYSPLQHFGL
TKPGMHIGVVGLGGLGHVAVKFAKGFGVKVTVISTSPSKKKEAIEHLGADYFLVSREPDQ
MQAAMGTMDGIIDTVSAVHPLLPLIGLLKFQGKLVMVGGPNRPLELPVFPLLMGRKVVAG
SCTGGMKETQEMIDFAGKHNITADVEVIPMDYVNTAMERLEKADVKYRFVIDIGNTLKSA

Transcript Sequence

Transcript ID

VIT_00s1389g00010.t01
Transcript Infomation

cdna chromosome:12X:Un:38955528:38958094:1 gene:VIT_00s1389g00010 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CAAATGGCAAAATCTGCAGAGCAAGAGCACCCCACCAAGGCCTTTGGATGGGCAGCAACT
GACACATCTGGAGTCCTCTCTCCCTTCAAATTCTCCAGAAGGGAAACAGGAGAAAAAGAC
GTAAGGTTCAAGGTGTTGTATTGTGGAATATGTCACTCCGATCTACACATGGCCAAGAAT
GACTGGGGCATGTCCACCTACCCTATAGTTCCCGGACATGAAATTGTGGGCATAGTGACA
GAGGTGGGAAGCAAGGTCGGAAAGTTCAAAGTAGGAGACAGAGTTGGAGTGGGGTGCGTG
GTTGGAGCTTGTCACTCTTGTGATATCTGTGACAATGATCTAGAGAATTACTGCCCCAAA
ATGATATTCACCTACAGTGCCCCTTACCATGATGGAACCACCACATATGGAGGCTACTCA
GATGTCATGGTTGCTGAGGAGCGCTATGTGGTTCGTATCCCAGACAACCTTCCTCTTGAT
GCCGGTGCTCCTCTCCTATGTGCCGGGATCACAGTGTACAGCCCCTTGCAACATTTTGGA
CTCACCAAACCTGGAATGCACATCGGTGTGGTTGGCCTAGGTGGACTGGGACATGTAGCT
GTAAAGTTTGCCAAGGGTTTTGGGGTTAAGGTGACTGTGATCAGTACTTCCCCTAGCAAA
AAGAAGGAAGCCATAGAACACCTTGGTGCCGACTACTTTCTAGTCAGCCGCGAACCAGAT
CAGATGCAGGCTGCCATGGGCACAATGGATGGCATCATTGATACAGTCTCTGCTGTTCAC
CCTCTTCTTCCATTGATCGGTTTGTTGAAATTTCAAGGGAAGCTCGTTATGGTTGGTGGA
CCAAATAGGCCGCTTGAGCTACCAGTCTTTCCTTTGCTTATGGGGAGGAAGGTAGTAGCT
GGAAGCTGTACAGGAGGGATGAAGGAGACACAGGAAATGATTGATTTTGCGGGGAAACAC
AACATAACTGCAGATGTTGAGGTTATTCCAATGGACTATGTAAACACTGCCATGGAGCGA
CTGGAGAAAGCCGATGTTAAGTACCGCTTCGTAATTGACATTGGTAACACCTTGAAATCA
GCCTAAGATAAGATAAGCTAGCTGGCACAATAATTCATTGTCCTCGAGCGATCGACTTGC
GGCCAAA