Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_00s1372g00010.t01
CDS Infomation

cds chromosome:12X:Un:38874788:38876677:1 gene:VIT_00s1372g00010 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGACCGTTAAGACAACCGTTACATGGAATTCAATGTTGGCTGGGTATTCAAACAGGCGA
GGGAAAATTAAAGTAGCTCGCCAACTGTTTGATAGAATTCCAGAACCAGACATTTTCTCA
TACAATATCATGTTAGCTTGTTATTTACACAACGCGGATGTAGAATCCGCAAGGCTTTTC
TTTGATCAAATGCCAGTTAAGGACACGGCATCCTGGAACACCATGATATCGGGTTTTTCA
CAGAATGGTATGATGGACCAAGCACGCGAGTTATTTTTGGTAATGCCAGTGAGAAATAGT
GTTTCTTGGAATGCCATGATATCGGGTTATGTTGAGTCAGGGGATCTGGATTTGGCAAAA
CAACTGTTTGAGGTAGCTCCGGTGAGGAGTGTGGTCGCATGGACTGCAATGATTACTGGG
TTTATGAAGTTTGGAAAGATTGAATTGGCAGAAAAATATTTCGAGGAGATGCCCATGAAA
AATTTGGTGACATGGAATGCTATGATTGCAGGGTACATTGAGAATTGTCAAGCAGAAAAT
GGCTTGAAGCTTTTCAAACGGATGGTGGAATCTGGGTTTAGGCCAAATCCATCGAGCTTG
AGCAGTGTTCTACTGGGTTGTAGTAATTTATCTGCATTGAAGTTGGGCAAACAGGTTCAC
CAGCTCATATGTAAATCTCCAGTCTCGTGGAACATAACTGCAGGGACTTCATTGCTTAGC
ATGTATTGTAAGTGCGGAGATTTAGAGGATGCATGGAAATTGTTTCTTGTGATGCCGCAA
AAAGATGTTGTAACCTGGAATGCAATGATTTCTGGTTATGCTCAACATGGGGCAGGTGAA
AAGGCTCTTTATTTGTTTGATAAGATGAGAGATGAGGGGATGAAACCAGATTGGATCACT
TTTGTTGCAGTTTTATCAGCCTGCAACCATGCAGGATTTGTAGATCTTGGTATTGAGTAT
TTCAATTCAATGGTGAGGGATTATGGAGTTGAAGCTAAGCCAGACCACTATACCTGTGTG
GTTGACCTCCTTGGTCGAGGTGGGAAGCTAGTTGAAGCTGTAGATTTGATAAAGAAAATG
CCTTTTAAACCACATTCTGCCATATTTGGAACCCTTTTGGGTGCCTGTAGGATCCACAAG
AACTTGGAGCTTGCTGAGTTTGCTGCCAAGAATTTGCTGAATCTTGATCCGGAGAGTGCA
GCTGGTTACGTTCAACTTGCTAATGTTTATGCAGCAATGAACAGATGGGACCATGTTGCT
ATGGTTCGGCGATCAATGAAGGACAACAAGGTGATTAAAACACCTGGGTATAGTTGGATT
GAGGTAAAGAGCGTGGTTCATGAGTTCAGATCAGGTGATAGGATTCACCCAGAATTGGCT
TTTATACATGAGAAACTAAATGAATTGGAGAGGAAGATGAGATTGGCAGGGTATGTTCCA
GATCTTGAATATGCATTGCATGATGTGGGTGAAGAGCAGAAAAAACAGATACTGTTGAGG
CACAGTGAGAAACTGGCAATCGCTTATGGGCTAATCCGAATGCCTTTAGGGACTCCAATT
CGGGTGTTCAAGAACTTGAGAGTATGTGGAGATTGCCACTCTGCAACAAAGTACATATCA
GCGATTGAAGGGAGGGTAATCATAGTGAGAGATACTACAAGGTTTCATCATTTCAGGCAG
GGGGAGTGCTCTTGTGGTGATTACTGGTAG

Peptide Sequence

PEP ID

VIT_00s1372g00010.t01
PEP Infomation

pep chromosome:12X:Un:38874788:38876677:1 gene:VIT_00s1372g00010 transcript:VIT_00s1372g00010.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MTVKTTVTWNSMLAGYSNRRGKIKVARQLFDRIPEPDIFSYNIMLACYLHNADVESARLF
FDQMPVKDTASWNTMISGFSQNGMMDQARELFLVMPVRNSVSWNAMISGYVESGDLDLAK
QLFEVAPVRSVVAWTAMITGFMKFGKIELAEKYFEEMPMKNLVTWNAMIAGYIENCQAEN
GLKLFKRMVESGFRPNPSSLSSVLLGCSNLSALKLGKQVHQLICKSPVSWNITAGTSLLS
MYCKCGDLEDAWKLFLVMPQKDVVTWNAMISGYAQHGAGEKALYLFDKMRDEGMKPDWIT
FVAVLSACNHAGFVDLGIEYFNSMVRDYGVEAKPDHYTCVVDLLGRGGKLVEAVDLIKKM
PFKPHSAIFGTLLGACRIHKNLELAEFAAKNLLNLDPESAAGYVQLANVYAAMNRWDHVA
MVRRSMKDNKVIKTPGYSWIEVKSVVHEFRSGDRIHPELAFIHEKLNELERKMRLAGYVP
DLEYALHDVGEEQKKQILLRHSEKLAIAYGLIRMPLGTPIRVFKNLRVCGDCHSATKYIS
AIEGRVIIVRDTTRFHHFRQGECSCGDYW

Transcript Sequence

Transcript ID

VIT_00s1372g00010.t01
Transcript Infomation

cdna chromosome:12X:Un:38874788:38876677:1 gene:VIT_00s1372g00010 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGACCGTTAAGACAACCGTTACATGGAATTCAATGTTGGCTGGGTATTCAAACAGGCGA
GGGAAAATTAAAGTAGCTCGCCAACTGTTTGATAGAATTCCAGAACCAGACATTTTCTCA
TACAATATCATGTTAGCTTGTTATTTACACAACGCGGATGTAGAATCCGCAAGGCTTTTC
TTTGATCAAATGCCAGTTAAGGACACGGCATCCTGGAACACCATGATATCGGGTTTTTCA
CAGAATGGTATGATGGACCAAGCACGCGAGTTATTTTTGGTAATGCCAGTGAGAAATAGT
GTTTCTTGGAATGCCATGATATCGGGTTATGTTGAGTCAGGGGATCTGGATTTGGCAAAA
CAACTGTTTGAGGTAGCTCCGGTGAGGAGTGTGGTCGCATGGACTGCAATGATTACTGGG
TTTATGAAGTTTGGAAAGATTGAATTGGCAGAAAAATATTTCGAGGAGATGCCCATGAAA
AATTTGGTGACATGGAATGCTATGATTGCAGGGTACATTGAGAATTGTCAAGCAGAAAAT
GGCTTGAAGCTTTTCAAACGGATGGTGGAATCTGGGTTTAGGCCAAATCCATCGAGCTTG
AGCAGTGTTCTACTGGGTTGTAGTAATTTATCTGCATTGAAGTTGGGCAAACAGGTTCAC
CAGCTCATATGTAAATCTCCAGTCTCGTGGAACATAACTGCAGGGACTTCATTGCTTAGC
ATGTATTGTAAGTGCGGAGATTTAGAGGATGCATGGAAATTGTTTCTTGTGATGCCGCAA
AAAGATGTTGTAACCTGGAATGCAATGATTTCTGGTTATGCTCAACATGGGGCAGGTGAA
AAGGCTCTTTATTTGTTTGATAAGATGAGAGATGAGGGGATGAAACCAGATTGGATCACT
TTTGTTGCAGTTTTATCAGCCTGCAACCATGCAGGATTTGTAGATCTTGGTATTGAGTAT
TTCAATTCAATGGTGAGGGATTATGGAGTTGAAGCTAAGCCAGACCACTATACCTGTGTG
GTTGACCTCCTTGGTCGAGGTGGGAAGCTAGTTGAAGCTGTAGATTTGATAAAGAAAATG
CCTTTTAAACCACATTCTGCCATATTTGGAACCCTTTTGGGTGCCTGTAGGATCCACAAG
AACTTGGAGCTTGCTGAGTTTGCTGCCAAGAATTTGCTGAATCTTGATCCGGAGAGTGCA
GCTGGTTACGTTCAACTTGCTAATGTTTATGCAGCAATGAACAGATGGGACCATGTTGCT
ATGGTTCGGCGATCAATGAAGGACAACAAGGTGATTAAAACACCTGGGTATAGTTGGATT
GAGGTAAAGAGCGTGGTTCATGAGTTCAGATCAGGTGATAGGATTCACCCAGAATTGGCT
TTTATACATGAGAAACTAAATGAATTGGAGAGGAAGATGAGATTGGCAGGGTATGTTCCA
GATCTTGAATATGCATTGCATGATGTGGGTGAAGAGCAGAAAAAACAGATACTGTTGAGG
CACAGTGAGAAACTGGCAATCGCTTATGGGCTAATCCGAATGCCTTTAGGGACTCCAATT
CGGGTGTTCAAGAACTTGAGAGTATGTGGAGATTGCCACTCTGCAACAAAGTACATATCA
GCGATTGAAGGGAGGGTAATCATAGTGAGAGATACTACAAGGTTTCATCATTTCAGGCAG
GGGGAGTGCTCTTGTGGTGATTACTGGTAGGCTTGCATAATGTAAGTACCTTGAGAAGTT
TTCTCCTGCAAGTTTCAAATGGTCATAAAACTATAGAAGTATACCTTGCCTGTGAAGAAT
CTCTCTTGGGGACTCTTTCCTTGACAAGAAGGTGATCACTTTTCAGTCCCAAGTTGAACA
AACTGCCAATTGAGAAACTGTAAAGGTGCA