Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_00s1361g00010.t01
CDS Infomation

cds chromosome:12X:Un:38815736:38816786:-1 gene:VIT_00s1361g00010 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCCACTGTAACCACAACACAGGCACAGGTGAATGCGCAATCTCTCCTCTCCATCAGA
CCCAAACCCACGCGAGTTTGCTTCTCCGTCGCTGCCTACGCCAAGAACGTAATAAAGCAT
CTCGCCGCTTGCAACGTTCCAATCCAGGAAGGTCTCTCCGATTCAGAATTCTCCACCATC
GAAGCCTCTCTCGGCTTTACCTTCCCTCCCGATCTCCGATCCATTCTCCAGGAAGGCCTT
CCGGTGGGCCCTGGCTTCCCCAACTGGCGATCGTCGTCGCACCAACAGCTTGAGATCCTC
ACCAGTCTTCCAATATTGGAGGTGTGTAAGGCGGTTTCCATGGGGAAGTTTTGGTGTAAA
TCTTGGGGCGATGAGCCTGTTGATTCCGACGAAGCTTTAGCTTTGGCCCGGCGGTTCTTG
AAGAAAGCTCCGGTTCTTGTTCCGATATATCGCCACTGTTACATTCCTTCCAACCCGAAT
TTGGCGGGAAATCCGGTGTTCTTCGTCCACGGAGGACATGTTCGGATGTGGAGCTTGGAC
ATGGCTGAATTCTTCCAGAAAGGGGAGTTCTTCCGGCTGGAGACGGAGGTGAGCGCGCCG
GCGTGGGCGGCGACGACGGCGAGGAGAATTGAGTTCTGGACGGAGGCGGTGGAGAGGGCG
CGTGGGGGGACGCGGGCGTGGTGGAGCGGGGAACTGGGTTATTGCATGGAGGAGCTGTTC
TGGAGGTTGAGAGATGGAGGGTGGAGAGAGGAGGAGGTGAGGGAGATGATGATGATGGAC
GGCCGCGATCAAAACGACAAAAAAGCTGCCGTTTCGAAAGACAACAAGGGCGTGGTGTGG
CACGTGCATGTACTGTCCCTCCTGATGCTACGTGCGGGCTGGAGCACCGAAGATGTTGTG
GACTCTCTCGATTTTCAAATCCAGCATACTCCACCGGACGGTGAATCATGGCTGGACTTT
CAACATCCACACAGCTGTTCTCAGGGGGGCTGA

Peptide Sequence

PEP ID

VIT_00s1361g00010.t01
PEP Infomation

pep chromosome:12X:Un:38815736:38816786:-1 gene:VIT_00s1361g00010 transcript:VIT_00s1361g00010.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MATVTTTQAQVNAQSLLSIRPKPTRVCFSVAAYAKNVIKHLAACNVPIQEGLSDSEFSTI
EASLGFTFPPDLRSILQEGLPVGPGFPNWRSSSHQQLEILTSLPILEVCKAVSMGKFWCK
SWGDEPVDSDEALALARRFLKKAPVLVPIYRHCYIPSNPNLAGNPVFFVHGGHVRMWSLD
MAEFFQKGEFFRLETEVSAPAWAATTARRIEFWTEAVERARGGTRAWWSGELGYCMEELF
WRLRDGGWREEEVREMMMMDGRDQNDKKAAVSKDNKGVVWHVHVLSLLMLRAGWSTEDVV
DSLDFQIQHTPPDGESWLDFQHPHSCSQGG

Transcript Sequence

Transcript ID

VIT_00s1361g00010.t01
Transcript Infomation

cdna chromosome:12X:Un:38815736:38816786:-1 gene:VIT_00s1361g00010 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TTTCAAACCTCTTCTCTCTATCTCTCTGCCTATTATCCACCTTCAATGGCCACTGTAACC
ACAACACAGGCACAGGTGAATGCGCAATCTCTCCTCTCCATCAGACCCAAACCCACGCGA
GTTTGCTTCTCCGTCGCTGCCTACGCCAAGAACGTAATAAAGCATCTCGCCGCTTGCAAC
GTTCCAATCCAGGAAGGTCTCTCCGATTCAGAATTCTCCACCATCGAAGCCTCTCTCGGC
TTTACCTTCCCTCCCGATCTCCGATCCATTCTCCAGGAAGGCCTTCCGGTGGGCCCTGGC
TTCCCCAACTGGCGATCGTCGTCGCACCAACAGCTTGAGATCCTCACCAGTCTTCCAATA
TTGGAGGTGTGTAAGGCGGTTTCCATGGGGAAGTTTTGGTGTAAATCTTGGGGCGATGAG
CCTGTTGATTCCGACGAAGCTTTAGCTTTGGCCCGGCGGTTCTTGAAGAAAGCTCCGGTT
CTTGTTCCGATATATCGCCACTGTTACATTCCTTCCAACCCGAATTTGGCGGGAAATCCG
GTGTTCTTCGTCCACGGAGGACATGTTCGGATGTGGAGCTTGGACATGGCTGAATTCTTC
CAGAAAGGGGAGTTCTTCCGGCTGGAGACGGAGGTGAGCGCGCCGGCGTGGGCGGCGACG
ACGGCGAGGAGAATTGAGTTCTGGACGGAGGCGGTGGAGAGGGCGCGTGGGGGGACGCGG
GCGTGGTGGAGCGGGGAACTGGGTTATTGCATGGAGGAGCTGTTCTGGAGGTTGAGAGAT
GGAGGGTGGAGAGAGGAGGAGGTGAGGGAGATGATGATGATGGACGGCCGCGATCAAAAC
GACAAAAAAGCTGCCGTTTCGAAAGACAACAAGGGCGTGGTGTGGCACGTGCATGTACTG
TCCCTCCTGATGCTACGTGCGGGCTGGAGCACCGAAGATGTTGTGGACTCTCTCGATTTT
CAAATCCAGCATACTCCACCGGACGGTGAATCATGGCTGGACTTTCAACATCCACACAGC
TGTTCTCAGGGGGGCTGAGTTTTGCTACGAT